Paenibacillus mucilaginosus KNP414: KNP414_06054
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Entry
KNP414_06054 CDS
T01550
Symbol
lcfA
Name
(GenBank) LcfA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms00061
Fatty acid biosynthesis
pms00071
Fatty acid degradation
pms01100
Metabolic pathways
pms01212
Fatty acid metabolism
pms02024
Quorum sensing
pms04146
Peroxisome
Module
pms_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KNP414_06054 (lcfA)
00071 Fatty acid degradation
KNP414_06054 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KNP414_06054 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KNP414_06054 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pms01004
]
KNP414_06054 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pms04147
]
KNP414_06054 (lcfA)
Enzymes [BR:
pms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KNP414_06054 (lcfA)
Lipid biosynthesis proteins [BR:
pms01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KNP414_06054 (lcfA)
Exosome [BR:
pms04147
]
Exosomal proteins
Exosomal proteins of breast milk
KNP414_06054 (lcfA)
Exosomal proteins of breast cancer cells
KNP414_06054 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEI44578
UniProt:
F8FEH9
LinkDB
All DBs
Position
complement(6661643..6663346)
Genome browser
AA seq
567 aa
AA seq
DB search
MFDLSGQPWIGQYPASVPPTYDYPHHHLAKFLEDSAARHGDHPALHFMGRTVTYRSLLES
ARRFANGLLGLGVRKGDRVAVMLPNCPQAVIAYYGTLLIGGVVVMTNPLYMPRELEYQLN
DADAKLIVTLDLLCERVQGVMPATGLGHLVVTSLADYLPFPKNVLYGLKLRKDGQKPDIV
YGERVLSFSRLLKTSSPEAVDVQVDAGSDLALIQYTGGTTGRPKGVMLTHLNLVANTIQS
RLWAYRTKEAQEKYLAALPFFHVFGMTVLMNQSVYLAGTLLLIPRFRVEDVLKTIHKCRP
TVFPGAPTMYISLINHPDIRRYDLSSIEFCISGAAPLPHEVQERFESLTGGKLIEGYGLT
EASPVTHANNIWEARKLGSIGIPFPDTEARIVDPQSGEEVPQGQIGELVVRGPQVMAGYW
KRPDETAKVLKDGWLSTGDMARMDEDGYFFILDRRKDLIIAGGYNIYPREVEEVLFEHPD
VEEAVVAGVSDPYRGETVKAFIVLKQGAAADEESLKRWCKERLAVYKVPKIFEFRESFPK
TMVGKVLRRRLIEEGQEPPGKDKDQGA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacttgtcaggccaaccttggattggacagtatcccgcatccgtaccgccgacc
tacgattatccgcatcaccatctggcgaagttcctggaggactccgccgcgaggcacggc
gaccatccggccctgcatttcatgggccggacggtgacttaccggagcctgcttgagagc
gcccggcgcttcgcgaacggtctgctcggcctcggggtccgcaagggggaccgcgtggcc
gtcatgctgccgaactgtccgcaggcggtgatcgcctactacggcacgctgctgatcggc
ggggtcgtcgtcatgacgaacccgctgtatatgccgcgggagctggagtaccagctgaac
gacgcggacgcgaagctgatcgtcaccctggacctgctctgcgagcgggtccagggggta
atgccggccacggggctcggtcacctcgtggtgacgtccctggcggactatctgcctttt
ccgaagaacgtgctctatgggctgaagctccgcaaagacgggcagaaacccgatatcgtt
tacggggagcgcgtgctttctttttcgagactgctcaaaacgtcttctccggaggccgtg
gatgtgcaggtggatgccgggagcgatctcgcgctcattcaatataccggaggcacgacg
gggcgccccaagggggtcatgctcacgcatctgaatctcgtggccaatacgatccagagc
cgcctctgggcctaccggacgaaggaggcgcaggagaaatatttggcggccctgccgttc
ttccacgtgttcggcatgacggtgctcatgaaccagtccgtctatctggccggcacgctg
ctcctcatcccgcgcttccgggtcgaggacgtgctgaagacgattcataagtgcaggccc
acggtattccccggagctccgacgatgtacatctcgctgatcaaccacccggatatccgc
aggtacgatctctcgtcgatcgagttctgcatctccggcgcggccccgctgccccatgaa
gtgcaggagcggttcgagagcctgacgggtggcaagctcatcgaaggctacggcctcacg
gaagcctcgccggtgacccatgccaacaacatctgggaggccaggaagctcggctcgatc
ggcatcccgttcccggataccgaggcgcgcatcgtcgatccgcagagcggggaggaggtg
ccgcaggggcagatcggcgagctggtcgtccgcgggccgcaggtgatggcgggttactgg
aagcggccggacgagacggcgaaggtgctgaaggacggctggctgtccaccggcgatatg
gcccggatggatgaggacggctatttcttcatcctcgaccggcgcaaggacctcatcatt
gcgggaggctataacatttatccgcgcgaggtcgaggaggtgctcttcgagcatccggac
gtggaggaggcggttgtcgccggtgtctccgatccgtaccggggcgagacggtcaaggcg
ttcatcgtgctgaagcagggggccgcggcggacgaggaaagcctgaagcgctggtgcaag
gagcggctggccgtctacaaggtcccgaagatcttcgagttccgcgagagcttcccgaag
acgatggtcggcaaggtgctgcgccgcaggctgattgaagaggggcaggagccgccgggc
aaggataaagatcagggggcctga
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