Paenibacillus mucilaginosus KNP414: KNP414_07453
Help
Entry
KNP414_07453 CDS
T01550
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms02020
Two-component system
pms02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KNP414_07453
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KNP414_07453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pms03021
]
KNP414_07453
Transcription machinery [BR:
pms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KNP414_07453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_IclR
HTH_23
HTH_38
Sigma70_r4
HTH_3
HTH_21
HTH_36
HTH_Tnp_ISL3
MarR
I-HmuI_NUMOD-like
Motif
Other DBs
NCBI-ProteinID:
AEI45957
UniProt:
F8F7E8
LinkDB
All DBs
Position
complement(8157263..8157994)
Genome browser
AA seq
243 aa
AA seq
DB search
MARRLGLPPEAVREIARYIRGLQPRPGSLHPGERTHYVVPDAEVRLERGELLIRWNAELT
PRLTVQDGYERLGRTDGEAAAYLKSKRRGADWLMRAVEQRYRTLKRVIAAIFEEQPGFWG
QGLRGLRPMNLRTIADKLGLHESTVSRAVNGKYVRTCHGTFELKAFFAAVPLAESGGGGG
ASSLEVKSVIAELVAGENKGRPYSDEKLAQELSKRGLQVARRTVAKYREELHILSSSLRK
RVL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgccggctcggtctcccgccggaggcggtgcgggagatcgcccgctatatccgg
gggctgcagccccgcccgggcagtctgcaccccggcgaacgaacgcattacgtcgtgccg
gacgccgaagtccggctggagcggggggagctgctcatccgctggaatgcggagctcacc
ccccggctcaccgtgcaggacggctacgagcggctcgggcggaccgatggcgaggcggcg
gcctacctgaagagcaagcggcggggggccgactggctgatgcgcgcggtggagcagcgc
tatcggacgctgaaacgggtcatcgccgcgatcttcgaggagcagccgggcttctggggg
cagggcctgcgaggcctgaggccgatgaacctgcggacgatcgccgacaagctgggcctg
cacgaatccacggtcagccgggcggtgaacggcaagtatgtgcgcacgtgccacggcacc
ttcgagctcaaggccttcttcgcggccgtgccgctggcagagagcggcggaggcgggggc
gcttcgagcctggaggtcaagtccgtcatcgccgagctggtggccggcgagaacaagggc
aggccgtactccgacgagaagctggcgcaggagctctcgaaacgggggctccaggtggcc
cgccgtacggtggccaagtacagggaagagctgcacatcctctcttcctccctgcgcaaa
cgagtgctgtag
DBGET
integrated database retrieval system
