Prochlorococcus marinus MIT 9313: PMT_0186
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Entry
PMT_0186 CDS
T00143
Name
(GenBank) Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMT_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_0186
Enzymes [BR:
pmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PMT_0186
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PMT_0186
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMT_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CAE20361
UniProt:
Q7V8Y5
LinkDB
All DBs
Position
complement(215736..216611)
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AA seq
291 aa
AA seq
DB search
MPELPEVETVRRGLADRLVDFQIGQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK
YLMASLHHEIAQSSADSEPDPDGGWWGVHLRMTGQFQWHEAISSPCPHTRVRIWNKKNEE
LRFVDTRSFGQMWWVPPGNAPETIITGLQKLGPEPFSSAFNSSYLSKRLKGSKRPIKSAL
LDQSIVAGAGNIYTDESLFAARIRPHTPSGQLKKVELERLCNCLTEVLRVSIGAGGTTFS
DFRDLEGINGNYGGQAWVYRRGGQACRICSTPIRRESLCGRGTHWCPNCQR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaattacctgaagttgagacggtccgccgcggattggcagaccgtcttgttgat
tttcagatcggccaggttgaggtttgccgagaacgagccatagcaagccctggcggttct
gccctatttatcaagatgctctgcggcatgcacgtgggctcatggttaagacgcggcaag
tacttaatggcgtctttacatcatgaaattgcccagtcatcagctgattcagaacctgat
cctgatggtggatggtggggcgttcacctgcgcatgacaggacaatttcaatggcatgag
gccatcagttcaccctgcccgcatacacgcgtacgcatctggaacaaaaaaaatgaggaa
ctgcgcttcgttgacacgcgcagcttcggacaaatgtggtgggttccacctggcaacgcc
ccggaaacaatcatcacaggactgcaaaaacttgggccagaaccattcagcagcgccttc
aattcctcatacctaagcaaacgcttgaagggttcgaaacgaccaatcaagtcagcactt
ttggatcaatccatcgtggcaggggcaggaaacatctataccgatgaaagcctttttgca
gccagaatccgtccccacactccatcaggtcaattaaaaaaggtcgagcttgaacgctta
tgcaactgcctcacggaggtcctcagagtgagcatcggtgctggaggaacaaccttcagc
gacttcagagatcttgaaggcattaacggcaactacggtggtcaagcctgggtgtatcgc
agaggaggccaagcctgccggatatgcagcacgcccatccgccgtgaaagcctttgcggt
cgtggcacccactggtgccccaattgccaacgatga
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