Prochlorococcus marinus MIT 9313: PMT_0190
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Entry
PMT_0190 CDS
T00143
Name
(GenBank) possible LysM domain
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
pmt
Prochlorococcus marinus MIT 9313
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmt01002
]
PMT_0190
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmt01011
]
PMT_0190
Peptidases and inhibitors [BR:
pmt01002
]
Cysteine peptidases
Family C40
PMT_0190
Peptidoglycan biosynthesis and degradation proteins [BR:
pmt01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
PMT_0190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
CAE20365
UniProt:
Q7V8Y2
LinkDB
All DBs
Position
complement(219569..221014)
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AA seq
481 aa
AA seq
DB search
MRRIIVSALALTTLLPLPSWGASVTVRPGDTLSEIAARYQVSLRALMRLNGLANADNLFI
GQTLKLPGSASGTGPAGASRHTVRSGETLSTIAVRYRVRQQDLITLNGLSNADNLYIGQT
LKLPGGASGAIRAGASRHTVRSGETLSIIAARYRVRQQDLVALNGLANADNLFIGQTLKL
PGSASGTVRASATRHTVRSGETLSTIAVRYRVRQQDLITLNGLANANHVERGQTLKLPQG
AVVPKPKAAAKPKPVAIQANPNATSHTVARGQTLNQIAGAYQIPVATLIKINGINNPNKL
LVGSKLSLRVKPSTTTQPKSTTTVAIKPTAKTTVKPTVKSTTKPAAKPQPKPKSTTTVAI
KPTAKTTVKPTVKPTVKSTSKPAAKPQPKPKSTQQVAAKPSQTQWRTYGSLQVDWANWKF
MGGSYVAPTLNKDGKALYLAVNCPARKINTTGTNGSWKTWGAPQQRFEHDLVKDLCKAKG
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggatcattgttagcgctctagccctgacaacacttctaccgctgccatcctgg
ggtgccagcgtcacagtgagacccggtgacaccctttcggaaatcgcagcgcgatatcag
gtatcccttcgggccttgatgcggctgaacggcctagccaatgcagacaacctcttcatc
ggccagaccctcaaactgccaggtagcgcatcaggcacaggcccggctggagcaagccgt
cacacggtacgaagtggcgagaccctcagcaccattgctgttcgctaccgagtgcgccag
caggatctcatcaccctcaatggtctgagcaatgccgacaatttatatatcggccaaacg
ttgaaattaccgggaggtgcttccggggcaatcagagctggcgccagtcgtcacacagta
cgcagtggcgaaaccctcagcatcattgctgcccgctaccgagttcgccaacaggatctc
gtcgccctcaatggccttgccaatgcagacaacctcttcattggccagaccctcaaactg
ccaggcagcgcatcaggcacagtcagagctagcgccactcgtcacacagttcgcagtggc
gaaaccctcagcaccattgctgttcgctaccgagtgcgccagcaggatctcatcaccctc
aatggccttgccaatgccaaccatgtcgaacgtggccaaaccctgaaactgccccaaggg
gctgttgttcccaaacccaaagcagcagcaaagcccaaacctgtagccattcaggcaaat
ccaaatgccacctcccataccgtggctcgagggcaaacattgaaccaaatcgctggggct
tatcaaatccctgtagcaaccctgatcaagatcaatgggatcaacaaccccaacaagtta
ttagtcggcagcaaactgtctctacgggtcaaaccatcaacaacaacccagccaaaatcc
accacgacagttgccatcaaaccgactgcaaaaaccaccgttaaaccaactgttaaatcc
accaccaagcctgctgcaaaaccacaacccaagcccaagtccaccacgacagttgccatc
aaaccgactgcaaaaaccaccgttaaaccaactgttaaaccaaccgttaagtccacgagc
aagccagctgcaaaaccacaacccaagcccaaatccacccagcaagttgctgccaagcct
tcgcaaacgcaatggcgcacttacggttcactgcaagtggactgggccaattggaagttc
atgggaggaagctacgtggccccaaccctcaacaaagatggcaaagccctttatctggct
gtgaactgcccagcgcgcaagatcaataccaccggcacgaatggatcttggaaaacttgg
ggcgctccacagcagcgctttgagcatgatctcgtcaaggatctctgcaaagccaaaggc
ggctaa
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