Prochlorococcus marinus MIT 9313: PMT_0647
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Entry
PMT_0647 CDS
T00143
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03030
DNA replication
pmt03430
Mismatch repair
pmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMT_0647
03430 Mismatch repair
PMT_0647
03440 Homologous recombination
PMT_0647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmt03032
]
PMT_0647
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_0647
Enzymes [BR:
pmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMT_0647
DNA replication proteins [BR:
pmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PMT_0647
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PMT_0647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAE20822
UniProt:
Q7V7T7
LinkDB
All DBs
Position
complement(699452..702967)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAFVPLHNHSDYSLLDGATQLPQMVKRAKELGMPALALTDHGVMYGAIELLKLCKNAEIK
PIIGNEMYVINGSIEDPQPKKERRYHLVVLAKNAVGYRNLVKLTSISHLRGMRGRGIFAR
PCIDKELLKAYSEGLIVATACLGGEIPQAILRGRIDVARDVARWYQEVFGKDFYLEVQDH
GSPEDRIVNVEIVNIAKELGIELIATNDAHYLSKNDVEAHDALLCVLTGKLISDEKRLRY
TGTEYIKSEQEMGRLFADHLEPDVLQKAIANTAAVAEKVEEYSILGSYQMPRFPIPEGHS
AVSYLHEVSEQGLRQRLKLATTDPIDDHYGERLTYELGVMEQMGFPTYFLVVWDYIRFAR
EQGIPVGPGRGSAAGSLVAYALGITNIDPVQNGLLFERFLNPERKSMPDIDTDFCIERRG
EVIDYVTRRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYGDADRLAKLIPVVRGKPAK
LAAMIGSDSPNAEFREKYQNDPVVTKWVDMAMRIEGTNKTFGVHAAGVVIAAEPLDDLVP
LQRNNDGQVITQYFMEDVESMGLLKMDFLGLKNLTMIDKTLELVEVSNGERIDPDQLPTE
DPETFALLARGDLEGIFQLESTGMRQIVRDLRPSSLEDISSILALYRPGPLDAGLIPKFI
NRKHGREAIDFAHAALEPILKETYGIMVYQEQIMKIAQDLAGYSLGEADLLRRAMGKKKV
SEMQKHRSIFVEGASRSGVDQKIADELFDQMVLFAEYCFNKSHSTAYGAVTYQTAYLKAH
YPVAYMASLLTVNAGASDKVQRYISNCNAMGIEVMPPDVNASGIDFTPAGDRILFGLSAV
RNLGDGAIRQLIANRDGDGPFVSLADLCDRLPSNVLNRRGLESLIHCGALDAIDPESNRA
QLIADLELLIHWAASRARDRLSGQGNLFDLVAGAADEQTSDELSTAPKAAPVTDYPPTEK
LRLEKELVGFYLSDHPLKQLTAPAQLLAPIGLASLEDQPDKAKVSVITMLTEMRQVTTRK
GDRMAVLNIEDLTGSCEAVVFPKSYARLSDHLMLEARLLIWASVDRRDDRIQLIIDDCRA
IDDLRLLLVELMPDEACDITVQHKLRECLHQHRPAKDEFGVRVPVVAAVRQGPQVRYVCL
GHQFCVRDASAALSSLQQQAFKARCSDRLFV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgttcctcttcacaaccacagcgactacagccttctggacggagctacacag
cttccccagatggtgaagcgagccaaggagctaggcatgcccgctctggcactcaccgac
cacggtgtgatgtatggcgccattgaactgctgaagctttgcaagaacgctgagatcaag
ccgatcatcggcaatgagatgtatgtgatcaacgggtctattgaggatccgcaaccgaag
aaggagcgtcgttatcacctggtggtgcttgctaagaacgctgttggctatcgcaatctt
gtgaaactcaccagcattagccatctgcgcggcatgcgcggccgaggcatctttgcaagg
ccatgcattgataaagaactgctgaaggcctatagcgaggggttaattgttgccaccgct
tgtcttggtggggagattcctcaagccatcttgcgcggtcgcattgatgtagcaagggat
gtggcccgttggtaccaggaggtctttggcaaagacttctatctcgaagttcaggatcac
ggctcgccggaagaccgaatcgtcaatgtagagattgtgaacattgccaaagaactaggg
attgagctgattgcgaccaatgacgcccattacctcagcaagaacgatgtggaggcccat
gacgccctgctttgtgtgctgacaggcaagttgatcagtgatgagaagcgtctgcgctac
acaggtactgaatacatcaagtctgaacaggagatgggacggctattcgccgatcatctc
gaacctgatgtgctgcaaaaggctattgccaacacagcagccgttgccgaaaaagtagag
gaatactcaatcctcggtagttatcagatgcctcgtttcccgattcctgaaggacatagc
gccgtgagttatctacacgaggtctctgagcaggggctacggcaaaggttgaaactggca
acgacagatccaattgatgaccattacggcgaaaggctcacctatgagctgggcgtgatg
gaacagatgggcttccccacctatttcctggtggtatgggattacatccgctttgcacgt
gaacagggcattccagtaggaccagggagggggtcagcagctggctcactcgtggcatat
gcccttggtattaccaacattgaccctgttcaaaacggattgttatttgagcgattcctt
aatcctgagcgtaagtcgatgcctgatattgacactgatttctgtattgaacgtcgtggt
gaggtgatcgactatgtcacgcgtcgttacggcgaagacaaggttgctcaaattatcact
tttaaccgaatgacatccaaggccgtcttgaaggatgtagcccgggtgcttgatattccc
tatggagatgccgatcgacttgccaagcttattcccgtagtaaggggaaagcctgcaaaa
ctagctgcgatgatcggcagcgattcgccgaatgctgaattccgtgagaagtatcagaac
gatccagtagttacaaaatgggtcgatatggcgatgcgcattgaaggtacaaataaaacc
tttggcgttcatgccgctggagtcgtcattgctgctgagcccctagatgatcttgtaccc
cttcagcgcaataacgatggacaggtaattactcaatacttcatggaggatgtggagtcg
atggggttattaaagatggattttcttgggctcaagaatctcaccatgattgacaaaaca
cttgagcttgttgaagtcagcaatggagagagaattgatcctgatcaattgccaacagag
gatcctgaaacttttgccttacttgcaagaggagatcttgagggcatctttcaacttgaa
tcgactgggatgagacagattgtgcgtgaccttcgcccctcatctcttgaagatatatcc
tcaattttagctttgtacagaccaggtcctctggatgccggattgattccaaaatttatc
aatcggaaacatggtcgagaggcaattgattttgctcatgctgcccttgaaccaatcctt
aaggagacttacgggatcatggtttaccaggagcagatcatgaaaattgcccaggatctt
gctggctattctctgggcgaagctgacttgctacggcgtgcaatgggcaagaaaaaggtt
tcagagatgcagaaacatcgcagtatttttgttgaaggagcaagtcgaagtggtgttgat
cagaagatcgccgatgagcttttcgaccaaatggttttgttcgccgaatattgcttcaac
aagagtcactcaacagcttatggcgctgttacttatcaaactgcctatttaaaggcacat
tatccagttgcctatatggcgtcattactgacagtaaatgctggcgctagtgacaaggtg
cagcgctatatctcgaattgcaatgcgatgggaattgaagtgatgccgccagatgtgaat
gcttcagggattgatttcacccctgctggtgatcgcatcttgtttggtctttctgctgtg
agaaatcttggcgatggtgcaatcaggcagctaattgcaaatcgcgatggtgatggcccc
tttgtctcccttgccgatctctgtgatcgtctgccctccaatgttctgaatcgtcgcggg
ttggaatctcttattcattgcggagccctagatgccatagaccctgaatcgaaccgggcc
cagttaattgccgacttggagcttctgatccactgggctgcttctcgtgcccgtgatcga
ctcagtggtcagggcaacctatttgatcttgtagctggagcagcagacgagcaaacgtct
gatgagctgagcactgcacccaaggcagcaccggttaccgactacccaccgactgaaaag
ctgagacttgaaaaagagttggttggtttctacctttctgatcaccctctcaagcagctc
actgctccagctcaattgctggcgcccattggtcttgccagccttgaggatcagcctgac
aaggcgaaggtcagtgtgatcacgatgctgacggagatgcgccaagtcacaacccgcaag
ggcgatcgcatggcagttctcaacattgaggatctcaccggtagttgcgaagctgtggtg
ttccccaagagctatgcccgtctatcagatcacctcatgttggaagcgcgactgctcatc
tgggcctctgttgatcgtcgcgacgaccgtatccaattgatcattgatgattgccgcgcc
atcgatgacctacgactgctgttggtggagttgatgcctgatgaagcctgtgacatcact
gtgcagcacaagcttcgggaatgtctccatcagcatcgcccagccaaggatgaatttggc
gtgcgagtgcccgtggtggcagcggttcgccagggtccccaggtgcgttacgtatgccta
ggtcatcagttctgcgttcgagacgcttctgctgcactcagttcccttcaacagcaggca
ttcaaagctcgatgcagcgaccgactatttgtctga
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