Prochlorococcus marinus MIT 9313: PMT_0741
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Entry
PMT_0741 CDS
T00143
Name
(GenBank) probable ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmt03016
]
PMT_0741
Enzymes [BR:
pmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PMT_0741
Transfer RNA biogenesis [BR:
pmt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMT_0741
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
C2_SHIP1-2_first
Motif
Other DBs
NCBI-ProteinID:
CAE20916
UniProt:
Q7V7K3
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All DBs
Position
807496..809562
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AA seq
688 aa
AA seq
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MTATALTPSLKQGDLVGFVLKGQPQIGLLTSLKGSRAILRVAGTRREQQLASRELSILKQ
NHNMLEMETSLPTISEVRKLSLNSRDLIAGWRLLEGERRKSKTSPTALKITELAGLLLNN
DDPIHLAALWFWLNSDQPLFRVRRDHMVEARQLIDLRRIRQLRRKQQSRAQQRLDALALL
IADSPLSKDQWQDLPSDLQFTINRLIELADGPEDAFLADEQALQLIKDLKLGRSLSDLRY
WLIKKGWRDPHDLTTLKGSIWTKSFEGSVQAQADQLLNKFEQLSFGGDDNRLDLSDLRTY
TLDDHQTQEIDDAISLQCVDQDNWIWIHIADPARLIPVDSPLDLEARARATSLYLADGLR
TMLPLSVAVEVLSLRAGRRCAALSVAVVLDESGCIAGTRVCRTWIRPCYRLTYEDGDELI
ELAPPGDEDLSTLASLLTTRQLWRERQGALLLEQSEGRFKVKDDQPELHIVESSPARRLV
SEAMILMGTVIAEFGKRQNIALPYRSQPPTQLPSATELSQLIEGPVRHAAIKRCLSRGVL
GTRPMAHFSLGLSAYVQASSPIRRYADLLAHRQVVAHLGGSVPLSEHALMEQLDVLEDPL
RQAQQIQREDQRHWQKVWFLKHRHEQWPALFLRWLKPQDQIALVHVECLAMDLACKIHGL
IDPSPGLALIMRVLVIDPLTDQIELVAK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ctgactgcaacagctttgacgccttctctaaagcaaggtgatttagttggctttgtttta
aaaggtcaaccacaaattggactgctaacttcactgaagggaagccgagcaatcctaaga
gttgcaggaacacggcgagaacaacagctagccagtcgagaactatccattctaaagcaa
aatcacaacatgttagagatggagacatctctacccaccatcagtgaagttcgcaaactt
agtcttaattcacgcgatttaattgctggttggcgattgctcgaaggcgaaaggcgtaaa
agcaagacttcaccaacagcactcaaaatcacagaactagctggtttactacttaataat
gatgatcctatccatctcgcagcattgtggttttggcttaatagcgaccaacctttattt
cgagttcgacgtgaccacatggttgaagcacgtcaacttattgacctacgccgcatccgc
cagctgcgccgtaagcaacaatctcgagcgcagcaacgcctagatgctcttgcattgctt
atagcagattcacctctgagcaaagatcagtggcaggatttaccctcggatcttcagttc
actatcaaccgtttaatcgagctggctgacggtccagaggatgcttttttggcagatgaa
caagctcttcagttgattaaagatttaaagttgggtagatcgctgagcgacctccgttat
tggttgatcaagaaaggctggcgcgatccacacgatctaacaactctcaaaggcagtatc
tggacaaaatcatttgaagggagtgtacaagctcaagcggaccaattactcaataagttt
gagcaactatctttcggtggcgatgataatcgtcttgatttgagtgatttaagaacctac
accctcgacgatcatcaaactcaggaaattgatgatgcaatctctttgcagtgtgttgat
caagacaactggatttggatccatatcgccgatccggcaagacttattcctgtggacagt
cccttagatcttgaggctcgtgcaagagcaaccagcctctacttggctgatggcctaaga
acaatgctgccattgagtgttgcagtagaagttctcagtcttagagctggccgtcgctgt
gcagcgttgagtgttgctgtggttctagacgaatcagggtgtattgccggcactcgtgtt
tgtcgtacttggattcgcccatgctatcggctcacttatgaagatggggatgaattgata
gagcttgcgcctcctggtgatgaagatctttcaacactcgcaagcctactcacaacacgc
caattatggcgtgagcgacaaggtgcactgctgcttgaacaatctgaagggcgattcaaa
gtcaaggatgatcagcctgaacttcatattgttgagtcaagtccagccagacggctagtc
agcgaagccatgattttgatgggtactgttattgctgaatttggaaagcgtcaaaacatt
gctctgccctatcgcagccaacctccgactcaactacccagtgcaactgaattatcacag
ttgattgaaggacctgtaagacatgctgcgatcaagcgttgccttagccgaggtgtcctt
ggtactcgtccgatggcccatttcagtcttggcctctctgcctacgtacaagccagttcg
ccgatccgtcgctatgcagatttacttgcccatcgacaagtggtggctcacttaggaggc
tcagttccattaagcgagcacgctctcatggagcagttggatgtacttgaagaccctctt
cgccaagcacagcaaattcaacgcgaagaccagcgacactggcaaaaggtgtggttttta
aaacatcgccatgaacaatggcctgccctatttctgcgatggttgaagcctcaagatcag
attgcacttgtgcatgtggaatgcctggctatggatcttgcctgcaagatccatggtttg
atcgaccctagtccaggtcttgcattgataatgagagttcttgttattgatccattgact
gatcagattgagctggtcgccaagtag
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