Prochlorococcus marinus MIT 9313: PMT_0761
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Entry
PMT_0761 CDS
T00143
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03410
Base excision repair
pmt03430
Mismatch repair
pmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMT_0761
03430 Mismatch repair
PMT_0761
03440 Homologous recombination
PMT_0761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_0761
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PMT_0761
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PMT_0761
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PMT_0761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAE20936
UniProt:
Q7TUZ6
LinkDB
All DBs
Position
830386..832284
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AA seq
632 aa
AA seq
DB search
MSSSQHPTWSWQLPKPIPSDPLPEVPLPLPLRAVLVRRGVLDSSTATTILEPPKPPDPCD
HFPDLAKAIVRLQGACQIAESVAICGDYDADGMTSTALLMVTLKCLGAQPIAAIPNRKSE
GYGLNRDMVIRLHEQGIRLIVTVDNGVTAQDALQQAENLSMEVILTDHHTLPDSPLNVLC
LLHPSVTPQDSPYRCLAGVGLAYLLASSLAEAMDCKEAIGPARDLFCIGTVADMAPLTGA
NRAFLREGLNNLHRTRCKGLRALQRLAGIEERPLKAEDIGFQLAPRINAVGRLGDPQLVV
KLLTVDNEDEAMTLARQCDQLNRQRKDLCNAIEAEAIALVEAEGATPPPFLMLAQNHWHH
GVIGIVAARLMERYFRPTALLAGEGDGRLRASVRAPSGFAVNDSLKACAVHLDRFGGHSA
AGGFTIRAEKVGALHEALNKLASNWHATVGGGVSISPETLLKLHEINLDLWNSLQQLEPF
GIGHPAPLFWARNCLVVDQHRMRGGHLQLILAQGDCQRRAIAWRLISEAQVPERIDVAFR
INMNHWQGEDRLQMEVVALRAYCPEINLHRKDKTYRCLIDKEGQMVLVNPKGEVLKAILS
SNGKLKCTDSRARHPYIHNLIEEGLIGLGLRP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatcatcccaacatcccacctggagctggcagctgccgaagcccatcccctctgac
cctctgccagaagttcctcttcctttgcctctaagggccgtgctggttcgcagaggcgtg
ctggattcctctacagctacaacgatcctggaaccacccaaaccaccagatccttgcgat
cactttcctgatctagcgaaggccattgttcgtctgcagggagcctgtcaaatagcagaa
tcagtcgccatctgtggcgactacgacgccgatgggatgaccagcacagccttgctaatg
gtgacgttgaagtgtcttggcgctcaaccaatagctgcgatcccgaaccgaaaaagtgaa
ggctacggtctcaatcgcgacatggtgataaggcttcatgaacagggaattcgactgatt
gtcaccgtcgacaacggtgtaacagcccaagatgcactgcaacaggcagaaaacctctct
atggaggtgatcctcaccgaccaccacacactcccagactcacctcttaatgtgctctgc
ctgcttcatccatcagtaacacctcaagactcaccctaccgatgcctggcaggcgtaggt
ctggcatacctgcttgcttcatctcttgctgaagcgatggattgcaaagaagcaataggg
cctgcaagagatttattctgtattggaacagtagcggatatggcaccgctcactggtgca
aatcgagccttcttgagagaaggtctgaacaatctgcatcgaacccgatgtaaaggcctt
agagctctccaacggctggctggtatagaagaacgtccccttaaagccgaagacatcggc
ttccagctagccccaaggattaatgccgtagggcgtctaggtgatccgcagctcgtggtg
aaacttttgactgtcgataacgaagacgaggccatgacccttgctcgtcaatgtgaccag
ctcaaccggcagcgcaaggatctctgtaatgccattgaggcagaagctattgccctggtt
gaggccgagggtgcaacacctccaccatttttgatgcttgctcagaatcattggcaccat
ggcgtgatcggaatcgtggcagctcgtctaatggaaagatattttcgcccaactgcatta
cttgctggtgagggagacggacgtctacgtgcctctgtacgtgcaccatctgggttcgct
gtgaatgattctctcaaggcctgtgctgttcatcttgatcgctttggtggccattcagca
gcaggtggttttacgattcgagctgaaaaagtaggagcactgcatgaagcattaaataag
ctggctagcaattggcatgcaactgttggtggtggggtctctatttcaccagaaacactt
ttaaagcttcatgagatcaacttggatctatggaatagccttcagcaactagagcccttt
ggcattggtcacccagctccactgttctgggcacggaattgtcttgttgttgaccagcac
agaatgcgtggtggtcacctgcaactaattttggcccaaggtgactgccagagaagggca
attgcgtggcgattgataagcgaagcccaagttcctgaacggattgacgtagcatttcga
atcaacatgaaccactggcaaggggaggaccgcctgcagatggaggttgtcgccctacgg
gcatattgccctgaaatcaaccttcatcgcaaggataaaacctatcgctgccttatcgac
aaagaaggtcaaatggtactagttaatcctaaaggtgaggttctaaaagccatcttgtca
agcaatggaaagcttaaatgcactgacagtcgagctagacatccttacattcataacctg
atcgaagagggattaataggtctgggacttcgcccatga
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