Prochlorococcus marinus MIT 9313: PMT_1089
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Entry
PMT_1089 CDS
T00143
Name
(GenBank) possible exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMT_1089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_1089
Enzymes [BR:
pmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PMT_1089
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMT_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
CAE21264
UniProt:
Q7V6Q7
LinkDB
All DBs
Position
complement(1179591..1182902)
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AA seq
1103 aa
AA seq
DB search
MLTIYRSNRAEWLARVLAEQLRLAPPGLFDSVDVLVNTWPTSRWLGEQLASVNGISALVR
FPFPGSRLRQLVRMILGIDSDAEDPWRASRLVWPLLDLLPQLLETEEAAPLREWVNRQPS
RPGHLNRVQWQLARSIADAFDDYALYRPKLIHQWLEGSDRLLNSSQEMPLTLRWQPQLLR
LLAERLQVEPFGIQVHRAVSKLRSGDNPAMALPSQLRLFGLSSLAPVQVELIQALSGFVD
VQIFLLTPCPDLWQRCRSRREMLGHQWTEPADGLWLLEAPRLEAILGRMGAEFQQLLEGG
GESQLGQWQEGDLFAAPATMACESGKEPTLLEQLQQQLVSPEDHQPLRRRQEDSSLQFLA
CPGQWRQVQLVRDQILQWFAADPSLEPRDVLVMTPQVNRFAPLLASVFNDAAATGVELPW
RLTDRSQQDSPGLTQGMLQLLQIAGERLTATALEGLLANPAIQQQQGFSQDDASSLSRCL
QRTGFRWGLDAEERGGDETHSLSWCLDRWLLGLVLPSTPGLAPGGAAPFAEGLEPAQLAK
WWQLLAQFCRQLKEFRRARTCGAWVELLQGFVEELFGDGGSWAWERQCLLIALEDWRQIG
ADCTLLLEAAVVADVLNEALSADSGRFGHRTGALTVSALEPMRAIPHRVIVLMGLDADVF
PRHRERAGFHLLEQQRQLGDPRSSDQDRYVLLEALMSTRQHLLITWNSRDEHTGECRPAA
SPVQQWLGRLQHELSDETFEGLCREPAANPLERSNFLSQGSQPPPSCDRRHFEARRWLDK
TLAPPPLALALPLSWGPVKEEVSTAISSELLLRWLIAPQLIWLEQFQLTAREWLDPVEDL
ETLDLDEWHRHGLLRQRLSELLGNLPTDENALLQESAAGDWKHRYAGQGTLPPGAAATLE
CERLEKRWQHLQATLLSMGPCSTRRLELADGSRQMLWAGDTVVVVQPGQLKSRGVMEGWL
SHLQVCANHTLTAATVVVARCGSAAKKDQFEIALRWQPLPAEQAREQLIALQALACQGLS
QCWPVPPMSGWAYANANNKSAGRGEQAFRQSWSGGFNVQGERERAEMQLCFGLNCEASEL
LNSAGFEQAYTSLYGPLFEALAI
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacgatctaccgcagcaacagagcggagtggttagctcgagtgttggcggagcag
ctgcgtctggcaccaccaggtctatttgactcagtggatgtcctggtgaacacctggccc
acaagccgctggctgggggaacagttggcaagcgtgaatggcatcagtgctttggtgcga
ttccctttcccaggatcacgtttaaggcaattggttcggatgatattggggatcgatagt
gatgctgaagatccctggcgggctagtcgactcgtttggcctctgcttgatttgttgcca
cagcttttggagactgaagaagctgcgccattgagagaatgggtcaatcggcagccatct
cggccaggccacctcaaccgagtgcaatggcagttagccagaagcattgccgatgccttt
gacgactatgcgctttaccgccccaagttgatccatcaatggctggagggcagtgatcgg
cttttgaactcatcgcaggagatgcctttaaccctgcgctggcaaccccagttgctgcgt
ttattggctgaacgtttgcaggttgaaccgttcgggattcaggtgcatagggctgtttca
aagctgcgcagcggagacaaccccgccatggcattgccaagtcaactgcggctttttggt
ctgagcagtcttgctccggtgcaagtggagttgattcaggccctctcgggttttgtggac
gtacagatatttctgctgaccccctgcccggatctttggcagcgatgtcgtagcagaagg
gagatgttggggcatcagtggaccgagccggctgatggtttgtggttgctcgaagcgccg
cgcttagaagccatccttggacgcatgggcgcggaatttcagcagttgctggaaggtggc
ggtgagagtcagcttggccagtggcaggagggtgatctatttgccgcgccggccaccatg
gcttgtgaatccgggaaagaacctacgttgcttgagcagcttcagcagcagcttgtctcg
ccggaggatcatcaacctctgcggcgcaggcaagaggacagttctttgcagtttttggct
tgccctgggcaatggcgccaggtgcagttggtccgcgatcagatcttgcaatggtttgct
gccgaccccagcctcgaaccccgtgatgtgttggtgatgaccccacaggtcaatcgtttt
gctcctctgctcgcctcggtgttcaacgatgctgcagccactggcgtggagcttccctgg
cggctcacagatcgcagccagcaggacagccctgggctgacgcaggggatgttgcaactg
cttcagatcgcaggcgagcgattgactgccaccgcccttgaaggcttgctcgctaatccg
gcaatacagcagcagcaaggtttcagccaggacgatgccagtagccttagtcgctgttta
cagcgcacaggatttcgctggggacttgatgccgaggagcgtggtggtgatgagacccat
agcctcagctggtgcctggatcgctggctgcttggcttggtgttgcccagcacaccaggc
ctggcccctggaggagcagcacccttcgcagaggggctggaaccagcacagcttgcgaag
tggtggcagcttttggctcagttctgccggcagctgaaagagtttcgtcgtgctcgaact
tgtggagcttgggtagagcttctacagggttttgtcgaggagttgtttggtgatggtggc
tcttgggcctgggagcggcagtgcctgctgattgctttggaggattggcgtcagattggt
gctgactgcacgttgttgctggaagcggctgttgtagcagatgtgttgaatgaagctctc
tctgcagatagcggtcggtttggacatcgcactggtgccctcacagtgagtgctctggag
ccgatgcgtgccatccctcatcgtgtgatcgtgctgatgggattggacgccgatgttttc
cctcgccatcgtgagcgagctggctttcatctattggagcagcagcgtcagctaggtgat
ccacgcagtagtgatcaagatcgttatgtgcttttggaagcattgatgtcgacccgacag
catctgctgatcacctggaacagccgcgatgagcacacgggcgaatgtcgcccagctgct
agccctgtgcagcaatggcttggacggctgcagcatgagctcagcgatgagacatttgag
ggcctatgtcgagaaccagccgccaatccccttgagcgcagtaattttctatctcagggg
agccaaccacctcctagctgtgaccgtcgccatttcgaggcgcgccgctggttggataaa
actctagcgccaccaccccttgcccttgcgcttcctttgagttggggccctgtgaaagag
gaagtttcaactgctatctcatctgaattgttgttgcgctggttaatcgctccccaactg
atttggttggagcaatttcagttaacagcccgtgaatggcttgaccctgttgaagacctt
gagaccctcgatctagatgaatggcatcggcatggtttgctcaggcaacgtttgtcagag
ctgcttggcaatctccctactgatgagaatgcattgctgcaggaatcagcagcaggtgat
tggaagcatcgctatgccggtcaaggcacccttcctccaggagcagctgcgacgttggag
tgcgaacgtctcgagaagcgttggcaacatttacaggcaacgctactgagcatgggacca
tgctcgacacgacgtcttgagttggcggatggctccaggcaaatgctctgggctggggac
acggtcgtggtggtgcaaccaggtcagttgaagtcaaggggggtgatggagggatggcta
agccatttgcaggtctgcgcaaatcacacgcttacggcggcaactgtcgtcgtagcccgt
tgtggatcagcagccaagaaggatcaatttgagatagctctgcgttggcagccacttcca
gccgagcaagcaagagaacaactcattgctttgcaggctttggcctgtcagggtttgagt
cagtgttggccagtgccaccgatgagtggttgggcctacgccaacgccaacaacaaatcg
gctggtaggggtgaacaagccttccgtcagtcttggagtggcggatttaatgttcagggt
gagcgtgaacgggctgagatgcagctctgctttggtctgaactgcgaagcttcagagctt
ctcaacagcgctggttttgagcaggcatacacaagcctttatggccctttgtttgaggca
ttggcgatctag
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