KEGG   Prochlorococcus marinus MIT 9313: PMT_1089
Entry
PMT_1089          CDS       T00143                                 
Name
(GenBank) possible exodeoxyribonuclease V gamma chain
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
pmt  Prochlorococcus marinus MIT 9313
Pathway
pmt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PMT_1089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmt03400]
    PMT_1089
Enzymes [BR:pmt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PMT_1089
DNA repair and recombination proteins [BR:pmt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PMT_1089
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C Metal_resist
Other DBs
NCBI-ProteinID: CAE21264
UniProt: Q7V6Q7
LinkDB
Position
complement(1179591..1182902)
AA seq 1103 aa
MLTIYRSNRAEWLARVLAEQLRLAPPGLFDSVDVLVNTWPTSRWLGEQLASVNGISALVR
FPFPGSRLRQLVRMILGIDSDAEDPWRASRLVWPLLDLLPQLLETEEAAPLREWVNRQPS
RPGHLNRVQWQLARSIADAFDDYALYRPKLIHQWLEGSDRLLNSSQEMPLTLRWQPQLLR
LLAERLQVEPFGIQVHRAVSKLRSGDNPAMALPSQLRLFGLSSLAPVQVELIQALSGFVD
VQIFLLTPCPDLWQRCRSRREMLGHQWTEPADGLWLLEAPRLEAILGRMGAEFQQLLEGG
GESQLGQWQEGDLFAAPATMACESGKEPTLLEQLQQQLVSPEDHQPLRRRQEDSSLQFLA
CPGQWRQVQLVRDQILQWFAADPSLEPRDVLVMTPQVNRFAPLLASVFNDAAATGVELPW
RLTDRSQQDSPGLTQGMLQLLQIAGERLTATALEGLLANPAIQQQQGFSQDDASSLSRCL
QRTGFRWGLDAEERGGDETHSLSWCLDRWLLGLVLPSTPGLAPGGAAPFAEGLEPAQLAK
WWQLLAQFCRQLKEFRRARTCGAWVELLQGFVEELFGDGGSWAWERQCLLIALEDWRQIG
ADCTLLLEAAVVADVLNEALSADSGRFGHRTGALTVSALEPMRAIPHRVIVLMGLDADVF
PRHRERAGFHLLEQQRQLGDPRSSDQDRYVLLEALMSTRQHLLITWNSRDEHTGECRPAA
SPVQQWLGRLQHELSDETFEGLCREPAANPLERSNFLSQGSQPPPSCDRRHFEARRWLDK
TLAPPPLALALPLSWGPVKEEVSTAISSELLLRWLIAPQLIWLEQFQLTAREWLDPVEDL
ETLDLDEWHRHGLLRQRLSELLGNLPTDENALLQESAAGDWKHRYAGQGTLPPGAAATLE
CERLEKRWQHLQATLLSMGPCSTRRLELADGSRQMLWAGDTVVVVQPGQLKSRGVMEGWL
SHLQVCANHTLTAATVVVARCGSAAKKDQFEIALRWQPLPAEQAREQLIALQALACQGLS
QCWPVPPMSGWAYANANNKSAGRGEQAFRQSWSGGFNVQGERERAEMQLCFGLNCEASEL
LNSAGFEQAYTSLYGPLFEALAI
NT seq 3312 nt   +upstreamnt  +downstreamnt
ttgctgacgatctaccgcagcaacagagcggagtggttagctcgagtgttggcggagcag
ctgcgtctggcaccaccaggtctatttgactcagtggatgtcctggtgaacacctggccc
acaagccgctggctgggggaacagttggcaagcgtgaatggcatcagtgctttggtgcga
ttccctttcccaggatcacgtttaaggcaattggttcggatgatattggggatcgatagt
gatgctgaagatccctggcgggctagtcgactcgtttggcctctgcttgatttgttgcca
cagcttttggagactgaagaagctgcgccattgagagaatgggtcaatcggcagccatct
cggccaggccacctcaaccgagtgcaatggcagttagccagaagcattgccgatgccttt
gacgactatgcgctttaccgccccaagttgatccatcaatggctggagggcagtgatcgg
cttttgaactcatcgcaggagatgcctttaaccctgcgctggcaaccccagttgctgcgt
ttattggctgaacgtttgcaggttgaaccgttcgggattcaggtgcatagggctgtttca
aagctgcgcagcggagacaaccccgccatggcattgccaagtcaactgcggctttttggt
ctgagcagtcttgctccggtgcaagtggagttgattcaggccctctcgggttttgtggac
gtacagatatttctgctgaccccctgcccggatctttggcagcgatgtcgtagcagaagg
gagatgttggggcatcagtggaccgagccggctgatggtttgtggttgctcgaagcgccg
cgcttagaagccatccttggacgcatgggcgcggaatttcagcagttgctggaaggtggc
ggtgagagtcagcttggccagtggcaggagggtgatctatttgccgcgccggccaccatg
gcttgtgaatccgggaaagaacctacgttgcttgagcagcttcagcagcagcttgtctcg
ccggaggatcatcaacctctgcggcgcaggcaagaggacagttctttgcagtttttggct
tgccctgggcaatggcgccaggtgcagttggtccgcgatcagatcttgcaatggtttgct
gccgaccccagcctcgaaccccgtgatgtgttggtgatgaccccacaggtcaatcgtttt
gctcctctgctcgcctcggtgttcaacgatgctgcagccactggcgtggagcttccctgg
cggctcacagatcgcagccagcaggacagccctgggctgacgcaggggatgttgcaactg
cttcagatcgcaggcgagcgattgactgccaccgcccttgaaggcttgctcgctaatccg
gcaatacagcagcagcaaggtttcagccaggacgatgccagtagccttagtcgctgttta
cagcgcacaggatttcgctggggacttgatgccgaggagcgtggtggtgatgagacccat
agcctcagctggtgcctggatcgctggctgcttggcttggtgttgcccagcacaccaggc
ctggcccctggaggagcagcacccttcgcagaggggctggaaccagcacagcttgcgaag
tggtggcagcttttggctcagttctgccggcagctgaaagagtttcgtcgtgctcgaact
tgtggagcttgggtagagcttctacagggttttgtcgaggagttgtttggtgatggtggc
tcttgggcctgggagcggcagtgcctgctgattgctttggaggattggcgtcagattggt
gctgactgcacgttgttgctggaagcggctgttgtagcagatgtgttgaatgaagctctc
tctgcagatagcggtcggtttggacatcgcactggtgccctcacagtgagtgctctggag
ccgatgcgtgccatccctcatcgtgtgatcgtgctgatgggattggacgccgatgttttc
cctcgccatcgtgagcgagctggctttcatctattggagcagcagcgtcagctaggtgat
ccacgcagtagtgatcaagatcgttatgtgcttttggaagcattgatgtcgacccgacag
catctgctgatcacctggaacagccgcgatgagcacacgggcgaatgtcgcccagctgct
agccctgtgcagcaatggcttggacggctgcagcatgagctcagcgatgagacatttgag
ggcctatgtcgagaaccagccgccaatccccttgagcgcagtaattttctatctcagggg
agccaaccacctcctagctgtgaccgtcgccatttcgaggcgcgccgctggttggataaa
actctagcgccaccaccccttgcccttgcgcttcctttgagttggggccctgtgaaagag
gaagtttcaactgctatctcatctgaattgttgttgcgctggttaatcgctccccaactg
atttggttggagcaatttcagttaacagcccgtgaatggcttgaccctgttgaagacctt
gagaccctcgatctagatgaatggcatcggcatggtttgctcaggcaacgtttgtcagag
ctgcttggcaatctccctactgatgagaatgcattgctgcaggaatcagcagcaggtgat
tggaagcatcgctatgccggtcaaggcacccttcctccaggagcagctgcgacgttggag
tgcgaacgtctcgagaagcgttggcaacatttacaggcaacgctactgagcatgggacca
tgctcgacacgacgtcttgagttggcggatggctccaggcaaatgctctgggctggggac
acggtcgtggtggtgcaaccaggtcagttgaagtcaaggggggtgatggagggatggcta
agccatttgcaggtctgcgcaaatcacacgcttacggcggcaactgtcgtcgtagcccgt
tgtggatcagcagccaagaaggatcaatttgagatagctctgcgttggcagccacttcca
gccgagcaagcaagagaacaactcattgctttgcaggctttggcctgtcagggtttgagt
cagtgttggccagtgccaccgatgagtggttgggcctacgccaacgccaacaacaaatcg
gctggtaggggtgaacaagccttccgtcagtcttggagtggcggatttaatgttcagggt
gagcgtgaacgggctgagatgcagctctgctttggtctgaactgcgaagcttcagagctt
ctcaacagcgctggttttgagcaggcatacacaagcctttatggccctttgtttgaggca
ttggcgatctag

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