Prochlorococcus marinus MIT 9313: PMT_1442
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Entry
PMT_1442 CDS
T00143
Name
(GenBank) putative DNA-directed RNA polymerase (omega chain)
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMT_1442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmt03021
]
PMT_1442
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_1442
Enzymes [BR:
pmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMT_1442
Transcription machinery [BR:
pmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PMT_1442
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PMT_1442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CAE21617
UniProt:
Q7V5U8
LinkDB
All DBs
Position
complement(1528625..1528852)
Genome browser
AA seq
75 aa
AA seq
DB search
MITSGVEPKDLAKRGESLIRQSSNRYLTTVRIAFRAKQRRFDDFDGLLEESSVKPVQRAI
VELSDEQDQPDLLPG
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacatcgggagtggaacccaaagaccttgccaagcgtggggagagtctcatccgt
cagtcgagcaaccgctacctcactacggttcgaattgcgtttcgggcgaagcagcgccgt
ttcgatgattttgatggccttttggaggaatcgagtgtgaagccggttcagcgagccatc
gttgaactaagcgacgagcaggaccaaccggatctgctgcctggctga
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integrated database retrieval system
