Prochlorococcus marinus MIT 9313: PMT_1449
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Entry
PMT_1449 CDS
T00143
Name
(GenBank) GroEL protein (Chaperonin cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMT_1449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmt03019
]
PMT_1449
03110 Chaperones and folding catalysts [BR:
pmt03110
]
PMT_1449
03029 Mitochondrial biogenesis [BR:
pmt03029
]
PMT_1449
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmt04147
]
PMT_1449
Enzymes [BR:
pmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PMT_1449
Messenger RNA biogenesis [BR:
pmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PMT_1449
Chaperones and folding catalysts [BR:
pmt03110
]
Heat shock proteins
HSP60 / Chaperonin
PMT_1449
Mitochondrial biogenesis [BR:
pmt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PMT_1449
Exosome [BR:
pmt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PMT_1449
Exosomal proteins of other body fluids (saliva and urine)
PMT_1449
Exosomal proteins of breast cancer cells
PMT_1449
Exosomal proteins of colorectal cancer cells
PMT_1449
Exosomal proteins of bladder cancer cells
PMT_1449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAE21624
UniProt:
Q7TUS4
LinkDB
All DBs
Position
complement(1535444..1537078)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKKGID
KASDFLVSKIEELAKPISDSNAIAQCGTIAAGNDEEVGQMIADAMDKVGKEGVISLEEGK
SMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIGLVQDLVPVLEQIA
RTGKPLLIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLI
TEDAGLKLDNAKLEMLGTARRVTINKDTTTIVAEGNETAVKGRCEQIKKQMDETDSTYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLTHL
ASDLQKWANSNLSGEELIGSNIVEASLAAPLMRIAENAGANGAVVAENVKSRPISDGYNA
ATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGGMGG
DFDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgcattatttacaacgagcaagctcgacgtgcccttgagcgcggcattgac
atcctggccgaatccgtggccgtcacactggggcccaaaggccgcaatgtggtgcttgag
aaaaagtttggtgcaccccaaatcatcaacgatggcgtcaccatcgctaaagagattgag
cttgaagatcacattgagaacactggtgttgctctgatccgtcaggcagcttcgaagacc
aatgacgctgcaggtgatggcacgacaacagccactgttttggcccatgccatggtgaag
gccggcttgcgcaatgtggcggctggtgccaatgcaatctccttgaaaaaggggatcgac
aaggcttccgacttcctcgtgagcaagattgaggagctcgccaagccgatcagtgacagc
aacgccatcgctcagtgtggaaccattgctgccggcaacgacgaggaagtgggtcagatg
attgctgacgccatggacaaagttggcaaggaaggtgtgatctctcttgaagagggcaag
tcgatgaccactgaactggaggtcaccgaggggatgcgtttcgataagggctacatctcc
ccttacttcgctactgacactgagcggatggaggctgtgctggatgagccctacattctc
ctcactgacaagaagattggcttggtacaggatctggtgcctgtgctcgaacagattgcc
cgcactggcaagcccctgctgatcattgctgaggacattgagaaggaagctctcgcaacc
ttggtggtcaatcgtcttcgtggtgtgctgaatgtggctgccgtgaaggcgcctgggttt
ggtgatcgccgtaaggccatgctcgaagacatggcagtgctgaccaatggtcagttgatc
accgaagacgccggtcttaaattggacaatgccaagctggaaatgcttggtacagcgcgc
cgtgtgaccatcaataaggacaccacaacgatcgttgccgaaggcaatgagacggcggtg
aaagggcgttgcgagcagatcaaaaagcagatggacgagactgactcgacctacgacaag
gagaagctgcaggaacgacttgccaagctggccggtggcgttgctgttgtgaaggttggt
gctgccaccgaaaccgagatgaaggacaagaagctccgtcttgaagacgccatcaacgcc
accaaggcagcagttgaggaaggcatcgtcccaggtggcggcaccacactgactcacctc
gcttctgatctgcagaagtgggctaatagcaacctcagcggtgaggagctgattggttcc
aacattgtggaagcttccctggctgctcccttgatgcgcattgctgagaatgcaggcgcc
aatggtgctgtcgtggccgagaacgtcaagagcaggcctatcagtgacggctataacgct
gctactggggattacatcgacatgcttgctgcaggcattgttgaccctgccaaagtcacc
cgttctggtttgcagaatgcggcctcgattgctggcatggtgctgaccactgagtgcatc
gttgctgatttgcccgagaagaaggaggcagctcctgcaggcggtggcggcatgggtggt
gacttcgactactga
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