Prochlorococcus marinus MIT 9313: PMT_1506
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Entry
PMT_1506 CDS
T00143
Name
(GenBank) RNA polymerase gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMT_1506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmt03021
]
PMT_1506
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_1506
Enzymes [BR:
pmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMT_1506
Transcription machinery [BR:
pmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PMT_1506
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PMT_1506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
DUF7337
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
CAE21681
UniProt:
Q7V5P2
LinkDB
All DBs
Position
complement(1591304..1593208)
Genome browser
AA seq
634 aa
AA seq
DB search
MTNSNLRTENHFDYVKITLASPDRVMEWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGL
FCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWY
LKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDPGDHKELKYKQLLTEDEWLEIEDEIYAE
DSTIENEPMVGIGAEALKQLLEDLDLPDVAEQLREEISSSKGQKRAKLIKRLRVIDNFIA
TNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDY
SGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVM
QVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVH
VPLAIESQTEARMLMLASNNILSPATGDPIITPSQDMVLGSYYLTALKPGASVPEFGDQS
RTYSGLEDVIHAFEDKRILLHDWVWVRFNGEVEDEDEIEEPIKAELLSDGTRIEQWTYRR
DRFDEDGALISRYILTTVGRVVMNYTIIDAVAVA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactaacagcaacctccgtacagagaaccacttcgactacgtcaagatcacacttgct
tcaccagatcgggtgatggagtggggtcagcggacacttcctaatgggcaggtagtgggt
gaagtgacgaagccggagacgattaattaccgcaccctgaagcctgagatggacgggctc
ttttgcgagaagatcttcggcccttcaaaggattgggagtgtcattgcgggaaatataag
cgggttcgacaccgtggcattgtctgtgagcgttgtggcgtggaggtcactgaaagtcgg
gttcggcgtcatcgcatgggcttcatcaagttggcagctcctgtctcccacgtttggtat
ttgaaagggatacctagttatgtggcgatcttgttagatatgccactacgtgatgttgag
cagattgtttacttcaactgttatgtcgtgcttgatcctggcgatcataaggaactcaag
tataagcagttacttactgaggatgagtggttagagattgaagatgagatctatgcagaa
gattccacgattgagaatgagccgatggttggcatcggtgctgaagctctaaagcaattg
ctagaagatttagatttgcctgatgtagctgaacagttgcgagaggaaatctcatctagc
aagggtcaaaagcgggccaagttaattaagcgtttgcgtgtgattgataatttcattgct
accaatgcaaggcctgagtggatggtgctggatgcgattccagtcattcccccggatctt
cgtccaatggtccaattggatggcggacgtttcgcgacctccgacctgaacgacctttac
cgtcgggtgattaatcgcaacaaccgtcttgctcgacttcaggaaattctggcccctgaa
attatcgtcagaaatgagaagcggatgcttcaggaggcagtggatgctctgatcgataac
ggtcgtcgcggcagaactgttgttggtgctaacaatcgtccgttgaagtccctcagcgac
atcattgagggcaagcagggtcgcttccgtcagaacttgcttggtaagagggttgattac
tcaggtcgttccgtgatcgtggtgggccccaagctgaagatgcatcagtgcggcttgcct
aaagagatggcgattgagttgtttcaaccgttcgtgatccaccgtctgattcgtcagaac
attgtcaacaacatcaaggctgcaaagaagttgattcagcgtgctgatgatgaggtgatg
caggtgctgcaagaggtcatcgaggggcatccgattctgttaaaccgcgctccaactctt
catcgtctcggtattcaggctttcgagccaaagctggtcgatggtcgtgcgattcagtta
cacccgttggtctgtcctgcttttaatgccgacttcgatggtgaccagatggcggttcat
gtgccgctcgcgattgagtctcaaacggaggcacgcatgttgatgttggccagtaacaac
atcctttcgcctgccaccggtgatccgatcatcactccctcgcaggacatggtgcttggt
tcttattacctcacggcgctcaagcctggagcttctgtgcctgagtttggcgatcaatcc
agaacctattcaggtttagaggacgtcattcatgcgtttgaagataaaaggatcttgcta
catgactgggtttgggttcgttttaacggtgaggttgaggacgaagatgagatagaagag
cccatcaaagctgaactactcagcgatggaactcgcattgagcagtggacttatcgccga
gatcgtttcgacgaagacggagcattgatcagtcgctacatccttacaacagtgggccgc
gtggtgatgaattacacaattattgatgcggtggccgtcgcctga
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