Prochlorococcus marinus MIT 9313: PMT_1917
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Entry
PMT_1917 CDS
T00143
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03420
Nucleotide excision repair
pmt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMT_1917
03430 Mismatch repair
PMT_1917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_1917
Enzymes [BR:
pmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMT_1917
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMT_1917
MMR (mismatch excision repair)
Other MMR factors
PMT_1917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DEAD
NPHP3_N
ResIII
Ferritin
AAA_16
ALS2CR8
Motif
Other DBs
NCBI-ProteinID:
CAE22092
UniProt:
Q7V4N2
LinkDB
All DBs
Position
complement(2022796..2025204)
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AA seq
802 aa
AA seq
DB search
MSFLAGLNDAQRRAVDHHEGPLLLVAGAGSGKTRALTHRIAHLIGEHGADPSQILAVTFT
NKAAREMKERLELLLAQRLAQSQFGQPWSTLPPVEQRQLRTRIYREVTKELWIGTFHALF
ARMLRYDIDKFKDKEGLTWTKQFSIYDEADAQSLVKEIVTQELQLDPKRFEPKKVRWAIS
NAKNQGWFPDQLAAQVDGQRGKLTVETYRRYRKALAANNALDFDDLLLLPVQLLQQNEQI
RRYWHNRFRHVLVDEYQDTNRTQYELIKLLVTDGREPETFEDWQGRSVFVVGDADQSIYS
FRAADFTILMGFQDDFGDKASDDSTRTMVKLEENYRSTSTILEAANALIANNTERIDKVL
RATRGEGELITLTRCDDEIAEAEAVVHRMRMLEAAHPEFRWGDVAVLYRTNAQSRAIEES
LVRWRIPYIVVGGLRFYDRREIKDVLAYLRLLVNPADTVSLLRVINVPKRGIGKTTLQRL
ADAANQLGIPLWDVVSDAEAVRSLGGRSAKGLLQFCELINDLQCSSQDQIPSEMIQQVME
KSGYISELITEATDEAEERRRNLQELVNAALQYQEENEESNLEGFLASAALASDADSKDT
AADRVTLMTLHSSKGLEFPLVFLVGMEQGLFPSYRSLDDQSSLEEERRLCYVGMTRAKER
LFLSHASERRLWGGMRQPAVPSLFLAELPEGLVQGDLPQIGGVALRRERRLDRLTRVDRA
DNQRIKVGGVSGAPSNAVRRRQAGPAPGKAWVVGDRVVHSSFGEGEITHTFGSGEKVSIA
VKFAGMGPKILDPRLAPIEPLD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctggctggcctcaatgacgctcagcgaagggcggtggatcatcacgagggc
ccgttgttgttggtggccggtgcgggcagcggcaaaacgcgagctctgacccatcgcatc
gcccatctcatcggcgaacacggagccgatccgtctcagatccttgcggtgactttcacc
aacaaggcggcccgggagatgaaggagcgtcttgagctgttgctggctcagcgtcttgcg
cagagtcagtttgggcagccctggagcaccctgccacctgtggagcagcgtcagctgcgc
acccgcatctaccgcgaggtgaccaaggagctgtggatcggcaccttccatgccctgttc
gcgcgaatgttgcgttacgacatagacaagttcaaagacaaggagggactcacctggacg
aagcagttctcgatttacgacgaggccgatgcccagagtttggttaaggagattgtgact
caggagctacagctcgatcccaagcgctttgagcctaagaaggtgcgctgggcgattagt
aacgccaaaaatcaaggctggtttcctgatcaattggcagcacaggtcgatggtcagcga
ggcaagctcacggttgagacgtatcggcgttatcgcaaggcattagcggcgaacaacgct
cttgattttgacgacctgctgttgttgcccgtccagttacttcagcagaacgagcagata
cgacgttattggcacaatcgttttcgacatgtgttggttgatgaataccaagacaccaat
cgcactcagtacgagttgatcaagttgttggttaccgatggtcgtgaacctgaaaccttt
gaggattggcagggccgttcagtttttgtggtcggcgatgcagatcaaagcatctacagc
ttccgtgcggctgacttcacgatcttaatgggctttcaggacgactttggcgacaaagca
tcagacgattccactcgcaccatggtgaagttggaggagaattatcgctctacctcaaca
attctggaggcagctaatgccttgatcgctaacaatacagagcggattgacaaggtattg
cgagctacccgtggcgagggggagttgatcacccttactcgctgtgacgatgagatcgca
gaagctgaagctgtagtgcatcgaatgcgcatgctggaagctgctcatccagaatttcgc
tggggagatgtggcagtgttgtaccgcaccaatgcccagtcaagggcgattgaggagtcg
ttggtgcgttggcgtattccttacattgtcgtgggcggattacgtttttatgacaggcgt
gaaatcaaggatgttttggcctatttacgcttattggtcaaccccgccgatacggtgagc
ctgctcagagtcatcaatgtgcccaagcgaggcattggcaagaccaccttgcagagactt
gctgatgctgccaatcaacttgggattcctttgtgggatgtggtgagtgatgccgaagca
gtgcgctcactaggaggcagatcggcgaaggggttgttgcagttctgtgaattgatcaat
gacttgcaatgctcgagtcaagatcagattccttcggagatgattcagcaggtgatggag
aagagtggctatatcagtgagctgataactgaagctaccgatgaggcagaggagaggcga
cgcaatttgcaagaacttgtgaatgctgctttgcaataccaggaagaaaatgaagagagc
aatcttgagggctttttagcctccgctgcgttggccagcgatgctgatagcaaggatacg
gctgctgatcgggtgacgttaatgaccttgcatagcagtaagggactggagtttcccttg
gtctttctggttggtatggagcaggggcttttccctagctatcgctcccttgatgatcaa
tcctctttggaggaagaacgacgcctttgctatgtggggatgacacgtgccaaagaacgt
ttgtttttgtctcatgccagtgagcgaagactttggggtggcatgcgacagcctgctgtt
ccctcactatttcttgctgagttgcccgagggtttggtgcagggtgatctccctcaaatt
ggtggtgtggcattacggcgtgagcgacggcttgaccgtttgacgcgggttgatcgcgct
gacaatcaaaggatcaaagtcggtggtgtgagcggagcccctagcaatgcagtgcggcgg
cggcaggctgggcctgctccaggcaaggcatgggtcgtgggcgaccgggtcgttcattcc
agctttggcgaaggggagattacccataccttcggcagtggcgaaaaagtgtcgattgct
gtcaagtttgctggtatggggccaaagattcttgatccacgtttggccccgattgagcct
ttggattag
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