Prochlorococcus marinus MIT 9313: PMT_1993
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Entry
PMT_1993 CDS
T00143
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmt
Prochlorococcus marinus MIT 9313
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_1993
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PMT_1993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Rubredoxin_2
AAA_22
ChlI
AAA_16
GvpD_P-loop
Lon_C
AAA
PAXNEB
AAA_5
AAA_14
Elong_Iki1
TniB
ATPase_2
nSTAND3
AAA_24
DAP3
SLFN-g3_helicase
zf-RING_10
DZR
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CAE22167
CyanoBase:
PMT1993
UniProt:
Q7V4F9
LinkDB
All DBs
Position
complement(2106948..2108342)
Genome browser
AA seq
464 aa
AA seq
DB search
MRTASVYVCQSCGAKTSQFFGRCASCGTWNSLVEQVAHSTDGRRRSNSFDPAVEPVARRS
MAMASLGDQPVRRLASGYEELDRVLGGGLVPGSMVLVGGDPGIGKSTLLLQSATAMALQH
SVLYVSAEESAQQVKLRWLRLEGVTSDLQLLAETDLELVLEELEALRPAVAIIDSIQALH
DGSLSSAPGSVAQVRECAAALQRLAKRQETALVLVGHVTKEGMLAGPKVLEHLVDAVLTF
EGDRFASHRLLRAVKNRFGATHELGVFEMQGKGLAEVGNPSELFLKGESASGVATIVAFE
GTRSLVVDLQALVGVTSYASPRRTATGLGTNRLHQILAVLEKHMGLPLSRYDCYLAVAGG
LEVEEPAADLGVAAAVVSSYRDLMLPKGTVLLGELGLGGQLRPVGQLGQRLKEAVRLGFH
RAVVPQGSGLGPIGKELELELLEAASVTEALVMALGVNPADDGC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcactgcttccgtctacgtctgtcagagctgtggcgctaagaccagccagtttttt
ggtcgctgcgccagttgcgggacttggaattctttggtcgaacaggtcgctcattcaacc
gatggccgccgccgcagtaacagttttgatccggccgtggaaccagtggcgcggcgctcg
atggcgatggcttctctcggggatcaacccgttcgccgtcttgccagtggctacgaagag
ttggatcgagtcctgggcggcgggctggtgcctggatcaatggtgttagttggaggtgat
cctgggattggcaagagcacgttgctgttgcagagcgccacggctatggcactgcaacac
tctgtgctttacgtgagtgctgaggagtctgcccagcaggtgaagttgcgttggctgcgc
cttgagggggttacgtcggacctgcagcttttggcggaaacggacttggaattggtgctt
gaggaattggaagcactgcggcctgcggtggcaattatcgacagcattcaggctttgcat
gatgggtcgctttccagtgcgcctggctctgtcgctcaggtgcgcgagtgtgcagcagct
ttacagcgtttggctaagcgtcaggaaacagccttggttttggtgggccatgtcaccaag
gaggggatgctggcgggccccaaggtgcttgagcatttggtcgatgcagtactcactttt
gagggcgatcgatttgccagtcatcgccttctgagggctgtaaaaaatcgctttggagcc
acccatgagcttggggtgttcgagatgcaggggaagggcttagctgaagtcgggaatcca
agcgagctctttctcaagggtgagtctgcttctggggtggccaccatcgtggcctttgaa
ggcacccgttcattggtggtggatctgcaggctttggtgggtgtaaccagctatgccagt
cctcgccgtaccgctacaggattaggcaccaaccgcttgcaccaaattctggccgtattg
gagaagcacatgggcttgccattgtcacgctatgactgttatctggctgttgctggcgga
ttagaagtcgaagagcctgctgctgatttgggtgtcgccgctgccgttgtttccagttat
cgagatctcatgctgccaaaaggcacagttttgcttggggagttgggcttaggggggcaa
ttgaggccagtggggcagcttgggcagcgtcttaaggaagcagttcgcttaggttttcat
cgtgcagtagtgccgcagggcagtggcctaggacccatcggcaaggagctggagttggaa
ctacttgaggctgcgagtgtgactgaggctttggtcatggccctcggtgtgaatccagct
gatgatggctgctga
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