Prochlorococcus marinus MIT 9313: PMT_2270
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Entry
PMT_2270 CDS
T00143
Name
(GenBank) Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter
KO
K03701
excinuclease ABC subunit A
Organism
pmt
Prochlorococcus marinus MIT 9313
Pathway
pmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMT_2270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_2270
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMT_2270
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PMT_2270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_21
AAA_25
AAA_33
nSTAND3
AAA_22
AAA_23
NACHT
AAA_18
DnaJ_CXXCXGXG
Viral_helicase1
ATPase
MeaB
cobW
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAE22444
UniProt:
Q7V3S1
LinkDB
All DBs
Position
complement(2402240..2405200)
Genome browser
AA seq
986 aa
AA seq
DB search
MARAAAKIADSAGSLATQDDVIRVRGARQHNLNNVDVTIPRNKLVVFTGVSGSGKSSLAF
DTIFAEGQRRYVESLSAYARQFLGQVDKPDVDAIEGLSPAISIDQKSTSHNPRSTVGTVT
EIQDYLRLLFGRAGEPHCPKCGRSIKPQSIDEMVDQILLLPEGTRYQLLAPVVRGKKGTH
TKLISGLAAEGFARVRINGEVRELADNIELDKNHSHNIEVVVDRLVAREGIQERLTDSLR
TALKRGDGLALVEVVPKKGEELPDGVERERLYSENFACPVHGAVMEELSPRLFSFNSPYG
ACEACHGIGHLRKFTVDRVIPDPSQPVYAAVAPWAEKDNSYYFSLLYSVGEAFGFEIKTP
WNELTDEQWDVLLNGSREPILIQADSRYRKGKGGYTRPFEGILPILERQLRDASGEAQRQ
KLEKYLELVPCEACGGQRLRPEALAVKVGPYRITELTSISVALTLERIEKLMGVGAANGS
EPLLNSRQIQIGDLVLREIHMRLRFLLDVGLEYLSLDRPAMTLSGGEAQRIRLATQIGAG
LTGVLYVLDEPSIGLHQRDNDRLLATLRRLRDLGNTLLVVEHDEDTIRAADHLVDIGPGA
GVHGGHIVVEGSLDHLLMAEESLTGAYLSGRRSIPTPRQRREGSSRRLRLIDCDRNNLKN
LTVDFPLGRLVAVTGVSGSGKSTLVNELLHPALDHSLGLKVPFPQGLGELRGVNAIDKVI
VIDQSPIGRTPRSNPATYTGAFDPIRQVFAASVEAKARGYQVGQFSFNVKGGRCEACRGQ
GVNVIEMNFLPDVYVQCDVCKGARFNRETLQVTYKGHTIADVLQMTVEQAAEVFSAIPQA
ADRLRTLVDVGLGYVKLGQPAPTLSGGEAQRVKLATELSKRATGKTLYLIDEPTTGLSFY
DVHKLMDVMQRLVDKGNSIIVIEHNLDVIRCSDWIIDLGPEGGDCGGDLLVTGTPEQVAS
HPTSHTGHYLKKVLAKHPPETVSVAA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagctgctgccaagatcgctgattcagctggctcgctggcgactcaggacgac
gtgattcgcgtgaggggtgccaggcagcacaacctcaataacgtcgacgtcaccatcccc
cgcaacaagctggtggtgttcaccggagtcagtggcagcggcaagagttcgctggccttc
gacacgatctttgcggagggacaacgccgctatgtcgaaagtctgtcggcctatgccagg
cagttcttggggcaggtggacaagcccgatgtcgatgcgatcgagggtctctcgccggcg
atctcgatcgaccagaaatccaccagtcacaacccgcggtcgacggtgggcaccgtcacg
gagattcaggattaccttcgtttgttgttcggtcgcgctggcgaaccccactgccccaaa
tgtggccgctcgattaagccgcagagcatcgacgagatggtcgatcagatccttcttttg
ccggaggggacccgctatcagttgttggcgccggtggtgcgcggcaagaagggcacccac
accaagctgatcagtggcctggcagcagagggtttcgcccgggttcgcatcaacggtgag
gtgcgcgagctggccgacaacattgagctggacaagaaccacagccacaacatcgaagtg
gtggtcgatcgtcttgttgcccgtgaggggatccaggaacggctgaccgattccctccgc
acggctctcaaacgcggcgatggtttggcgttggtggaggtggtgcccaagaagggtgag
gaacttcccgacggcgttgagcgggagcgtctctattccgagaacttcgcctgcccggtg
cacggcgctgtgatggaggaactgtcgccacggctgttttccttcaacagtccctatggc
gcctgtgaggcttgccatggcattggccatctgcgcaaattcaccgtggaccgggtgatt
ccggatccatcccagccggtgtacgccgctgttgctccctgggcggaaaaagacaacagc
tattacttctctctgctctattcagtgggtgaagcctttggctttgagatcaagacccca
tggaatgagctcacggacgaacagtgggatgtgttgctcaatggaagccgcgaaccgatt
ctgattcaggccgatagccggtatcgcaagggcaaaggggggtacacccgcccgtttgag
ggcattcttccaatccttgagcggcagctccgtgatgccagcggagaagcccagcgccag
aagttggagaagtacctcgagctggttccttgtgaagcctgtggcggtcagcggctccga
cccgaagccctggcggtgaaggtgggtccttatcggattactgaactcacttctatcagc
gtggcgctgactcttgaacgcatcgaaaagctgatgggcgttggagcagctaatggatct
gagcctttgctcaattcacgtcagatccagatcggtgatttggtcttgcgtgagattcat
atgcgtcttcgctttcttcttgatgttgggctcgaatatctcagtttggatcgacccgcg
atgaccttatctggcggtgaggctcagaggattcgtttggcgacacagatcggtgctggt
cttacgggtgtgctttatgtgcttgatgaaccaagcattggtttgcatcagcgggacaat
gatcgtctgttagccacgctcagacgtttaagggatctgggtaacactttattggtggta
gaacacgatgaggacaccattcgtgccgctgaccatcttgtcgatattggtccaggggca
ggggtgcatgggggtcatattgttgttgaaggatctttggatcatctgttgatggctgaa
gaatctttgacaggtgcatatctcagtggccgccgctctattcctacacctagacagagg
agagaaggaagcagtcgcaggcttcgtttgattgattgtgatcgcaataatcttaaaaat
ctcaccgtagattttcctttagggcgccttgttgcggtcacaggagtcagtggtagtggt
aagagcactttggtgaatgagttacttcatcctgccttagatcacagtttgggtttgaag
gtgcctttccctcaaggcttgggcgagttgcgaggtgtcaatgcgatcgacaaggtgatc
gtgattgaccagtctccaatcggccgtacaccgcgctctaatccagccacctacaccggt
gcgtttgatccgattcgtcaggtatttgctgcttccgttgaggcaaaggctcgtggttat
caagttggtcagtttagtttcaatgtgaaaggtggtcgctgtgaggcttgtcgtggtcaa
ggggtgaatgtgattgaaatgaactttttgccagatgtttatgttcagtgcgatgtctgc
aaaggtgctcgatttaatcgggagaccttacaggtcacttacaagggccacaccattgca
gatgttttgcagatgacggttgagcaggctgcagaggttttttctgctattccccaggcg
gctgatcgattgcgcacgttggttgatgtgggactgggatatgtgaagttaggtcagcct
gcgcccacgctttcaggtggtgaagctcaacgtgtgaagcttgctaccgagctctcaaag
cgcgctactggcaaaaccctttatttgattgatgaaccaaccactggcctcagtttttac
gacgtgcataagttgatggatgttatgcagcgtcttgttgataaaggcaattcaattatc
gtgatagaacacaacttggatgtaattcgttgttctgattggattattgatcttggccct
gaaggaggagattgtggtggcgatcttctggtcacggggactccagaacaggttgcatcc
catcccactagccatacgggccattatctcaagaaggtgttagcgaagcatcctcctgag
actgtgtctgttgcagcttga
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