Pasteurella multocida subsp. multocida Pm70: PM0034
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Entry
PM0034 CDS
T00046
Symbol
dnaE
Name
(GenBank) DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Pathway
pmu03030
DNA replication
pmu03430
Mismatch repair
pmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PM0034 (dnaE)
03430 Mismatch repair
PM0034 (dnaE)
03440 Homologous recombination
PM0034 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmu03032
]
PM0034 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmu03400
]
PM0034 (dnaE)
Enzymes [BR:
pmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PM0034 (dnaE)
DNA replication proteins [BR:
pmu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PM0034 (dnaE)
DNA repair and recombination proteins [BR:
pmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PM0034 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AAK02118
UniProt:
Q9CPK3
LinkDB
All DBs
Position
31764..35243
Genome browser
AA seq
1159 aa
AA seq
DB search
MSEPRFVHLRVHSDFSMINGIAKVKPLIKACVDNHMVAMGLTDFTNFCGLVRFYGEALSA
GVKPIIGADVLVRSELCGDEPFELTLLAKNNIGYHNITLLLSKAYERGYQDLPYLDQAWL
AEHREGIIVLSGGHNGDVGKKLLKGHAAEIESAVAFYQDFFPDHFYLSLSRTGRYEEERY
VSLALTLAEEKGLPVVATNDVLFLHEDDFEAHEIRVAIHDSYTLDDPKRPKLYTNQQYFR
SEQEMCDLFADVPSALENTLLIAQRCNVTIRLGEYFLPQFPTGDLSTEDFLVKKSKEGLE
ERLKFLFPDEKVRQARRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDHVAET
YGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFAAEPQL
QAVYDSDEEVKALIDMARKLEGVTRNAGKHAGGVVISPGLITDFSPLYCDSEGKHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALDMINTRLAKEGKPPVDIATIPLDDPASFELLK
RSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGNEVV
AYPDPEYQHDSLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMA
AQREIFEKGAIQKGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTSEMDNTDKIVGLYDECLRMGLKVAPPDINTGKHHFSVNEYGEIVYGIGAIKGV
GEGPIEALISAREQGGIFKDLFDLCARVDLKKINRRTFESLILSGAFDKLGPHRAALSKN
LEDALKASDQHAKDAAMGQADMFGVLTESHEDVEKAYASTPRWSEKVILEGERETLGLYL
SSHPISPYLKELAHYSATRLKDLVPNSRGQMSTVSGLLVSSRFAVTKKGNRLGIATLDDR
SGRLDITLFGEALDKYADKLQKDTVIIVSGQVSFDEFSGGLKMSVRELMSLDEARSRYAK
SLAICLSEENMKPTFIRELKALLTPYSGGTLPIYVYYASTAGQCRVKMGVQWSVNPTDQL
FTELAEKLGENAVELEFQS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccccgttttgttcacctgcgtgttcacagtgatttttccatgattaatggg
attgccaaagtcaagccattaattaaagcctgtgttgataatcatatggtggcaatgggc
ttaacagactttactaacttttgtggtttagtgcgcttttatggcgaggcattatctgct
ggtgtgaaacccattattggagcagatgtgctggtgagaagtgaactttgtggtgacgaa
ccttttgagctgacattactggctaagaacaatataggctatcacaatattactttgcta
ctctctaaagcctatgagcgaggctatcaagatctcccttatctagaccaagcctggctc
gctgaacaccgtgaagggattattgtactgtcggggggacacaatggtgatgtgggtaaa
aaattactaaaaggtcatgcggctgagattgaaagtgcggtcgctttttatcaagatttt
ttccctgatcacttttatttgagtttgagccgtacaggacgttatgaagaagaacgctat
gtgagtttggctttgacattggcagaagaaaaaggcttgcccgttgttgccactaatgac
gtgttatttttgcatgaagacgattttgaagcccatgaaattcgtgttgctattcatgac
agttacacccttgatgatcctaaacgtcctaaactttataccaatcagcaatattttcgc
tctgaacaagaaatgtgcgatctttttgcagacgtgccttctgcattagaaaatacctta
ctgatcgcgcaacgttgtaatgtgaccattcgtcttggagagtattttttaccacaattt
ccaacgggcgatctgtccacagaagattttttggtaaaaaaatcgaaagaaggtttggaa
gagcgccttaaatttcttttccccgatgaaaaagtgcgtcaagcacgtcgccctgaatat
gatgaacgtttacaagtggaattagacgtgattaatcaaatgggttttccggggtatttc
ttgatcgtgatggagtttattcagtggtcgaaagataacgatattcctgtcggtccagga
cgtggttcaggtgctggatcgttggtggcgtatgcattaaaaattactgatcttgatccg
ctagaatttgatttactttttgaacgcttcttgaacccagagcgagtctccatgcctgac
tttgacgtggatttttgtatggatggtcgcgatcgcgtgattgatcatgtggcagaaacc
tatggtcgtggtgcagtatctcagattatcactttcggtaccatggcagcaaaagccgtg
atccgagatgtggggcgtgtacttggtcatccttatggttttgtggatcgcatctcaaaa
ttaattccgcctgatcccggcatgaccttggcaaaagcatttgccgcggagccacaatta
caagcagtatacgactccgatgaggaagtcaaagccttgattgatatggcgcgcaagctt
gaaggagtcacccgcaatgcaggtaagcacgccggaggcgtggtaatttcccctgggtta
attacagatttctcgccgctttattgtgactctgaaggtaaacatccagtcacccatttt
gataaaaatgatgtggagtatgccggtctggtgaagtttgactttttaggtttacgcaca
ctgaccattatcaaatgggcattagacatgattaatacgcgtcttgctaaagaaggcaaa
ccgcctgtggatattgccacaatcccgttagatgatcctgcttcttttgaattattaaaa
cgttcagaaaccactgccgtattccagctcgaatcgcgtggtatgaaggatttgatcaaa
cgtcttcagcctgactgttttgaggacattatcgcgttagtagcattgttccgtcctggt
ccattagagtcaggcatggtacaaaactttattgatcgtaagcatggcaatgaagtagtg
gcgtatcccgatccagaatatcaacacgacagtttaaaaccgattttagaaccgacttat
ggcgtaattgtatatcaagaacaggtcatgcagattgcccaagaattggctggatatact
ctcggtggggcggacttattacgtcgtgcgatggggaagaaaaagccagaagaaatggca
gcacaacgtgaaatttttgagaaaggcgcgattcaaaaaggagtggatggcgagttagcc
atgaaaatctttgacttggtggagaaattcgcgggttatggctttaataaatcccactct
gcggcttatgctttagtgtcttaccaaaccctgtggttgaaaacccattatcctgccgag
tttatggcggcggtaatgacatcagagatggataacaccgataaaattgtcggcttatac
gatgaatgtttgcgtatggggttaaaagttgctccgccagatattaacaccggtaagcat
catttcagcgtgaatgaatatggcgaaattgtgtatggtattggtgcgattaaaggggtg
ggagaaggacccattgaagcgttaatttcagcccgtgagcaaggcggcattttcaaagat
ttatttgatttatgtgctcgagtcgatttgaaaaagatcaatcgtcgtacttttgaaagt
ctgattttatctggtgcgtttgataaattaggtccacaccgtgccgcgttatcgaaaaat
cttgaagatgcgttaaaagcctccgatcagcacgcgaaagatgcggcaatggggcaagcg
gatatgtttggtgtgctgactgaaagtcatgaagacgtggaaaaagcgtatgccagtacg
ccacgttggagcgagaaagtaattttggaaggggaacgtgaaacccttgggttatattta
agtagccatcctattagtccgtatttgaaagagttagcgcattacagtgctacgcggtta
aaagatttagtaccaaattctcgtggacaaatgagtacggtcagtggtttacttgtctca
tctcgttttgctgtaaccaagaaaggcaatcggcttggcatcgctacactagatgatcgt
tcagggcgattagatatcacgttatttggtgaagccttggataaatatgcagacaaatta
caaaaagatacggtaatcattgtatcagggcaagtcagttttgatgagttttcgggtgga
ttaaaaatgtcagttcgcgaactgatgagcttagatgaagcgcgtagtcgctatgcgaaa
agtttggcgatatgtttatctgaggaaaacatgaaaccgacatttattcgtgaattgaaa
gcgttattaacaccttatagtggcggaaccttacctatctatgtttattatgcgagtaca
gcggggcaatgtcgtgtcaaaatgggagtacagtggtctgtgaatccgaccgatcaatta
tttactgaactggctgaaaaattaggtgaaaatgcagtggagttagagtttcaatcatga
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