Pasteurella multocida subsp. multocida Pm70: PM0192
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Entry
PM0192 CDS
T00046
Symbol
recJ
Name
(GenBank) RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Pathway
pmu03410
Base excision repair
pmu03430
Mismatch repair
pmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PM0192 (recJ)
03430 Mismatch repair
PM0192 (recJ)
03440 Homologous recombination
PM0192 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmu03400
]
PM0192 (recJ)
DNA repair and recombination proteins [BR:
pmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PM0192 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PM0192 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PM0192 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
AAK02276
UniProt:
Q9CP64
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All DBs
Position
214795..216516
Genome browser
AA seq
573 aa
AA seq
DB search
MNKLIQRRAVPLGEAVSSDPLLDRLYRARQIQHPQQLDRTLAALLHPQQLDGIEAAVTLF
VQAYKQQEKIVIVGDFDADGATSTALAVLALRQLGFTQVAFLIPNRFEQGYGLSIAVAEQ
ALEKDVQLLMTVDNGVSSVEGVAFLKAQGVKVLITDHHLPPTQLPDADAIVNPNLSSCAF
PSKALAGVGVTFYLMLALRAKFRELGIFNQQTQPNFTDLLDLVALGTIADVVPLDQNNRI
LAYQGLARIRAERCRCGIRALAEVANRDMRQLSTSDLGFSLAPRLNAAGRLDNMSVGVEL
LLAEDMASARALALELDGLNQTRKEIEQGMKLEALEICRQLTALQQTLPFGIALYQADWH
QGVLGIVASRIKDHFHRPVVAFAQEQAGILKGSARSVEGLHLRDALERIHCLYPDMILKF
GGHAMAAGLTIQESRFADFQQAFNQIVGDWLDEGQRQGIVWTDGELDSVQLSLTTAECLK
EAGPWGQAFPEPVFDGEFKILQQRLVGEKHLKMMVEPKQGGPLLDAIAFNVDTRYYPDLS
IKLAKLAYKLDINEFRGNRHLQLLVDYIVPIGT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattaatccaacgtcgtgctgttcccttaggtgaggcggtgtcttctgatccc
ttacttgatcgcctctatcgtgcacggcagattcaacatcctcaacaattagaccgcact
ttagctgcccttttacatccgcaacaactggatggaattgaagcggcggtcactctcttc
gtacaagcctataagcaacaagaaaagattgtaattgtgggcgattttgatgcagatggt
gcgactagcaccgccttagctgtactcgcattacgtcaattaggctttacacaagtggcg
tttttaattcctaatcgttttgaacaaggttatggtttgagcatcgcggtagcagagcaa
gctttagaaaaagatgtacagctattaatgaccgtcgataacggggtatcctcagtcgag
ggggtggcttttttaaaagcgcaaggggtcaaggtcttaattactgatcatcatttgcct
cctactcaattgcccgacgcggatgccattgtcaatcctaatttatcaagctgtgctttt
ccatcaaaagccttagccggtgtcggggttactttctatttaatgttagcattgcgcgcg
aaatttcgtgagttggggatatttaatcagcaaactcaaccaaatttcaccgacttattg
gatctcgtcgccttaggtaccattgccgatgtggtgcccttagatcaaaataatcgtatt
ttagcctatcaaggtttagcacgtattcgcgcagaacgttgtcgttgcggtattcgtgcg
ttagcagaagtggctaatcgagatatgcgtcagttatctacttcggatttaggtttttct
cttgcaccacgtttaaatgcggcagggcgtttagataatatgtcagtcggtgttgagctt
ttattggctgaagatatggcaagcgcgcgagcattggcacttgaattagatggtttgaat
caaacgcgtaaagaaattgagcaaggcatgaaacttgaggcattagaaatttgccgtcaa
ttgaccgcacttcaacaaacccttccgttcggcattgcgctgtatcaagcggactggcac
caaggggtgttagggattgtggcttcacgtattaaagatcattttcatcgtcctgtggtt
gcatttgcgcaagagcaagccggtattctaaaaggctcagcccgttccgttgagggatta
catttacgtgatgcgttagagcgcattcattgtttgtatcctgacatgattttaaagttt
ggtgggcatgcgatggcggcaggcttaaccattcaagaaagccgttttgctgattttcag
caggcatttaatcaaattgttggtgattggcttgatgaaggtcagcgacaaggtattgtg
tggacggatggtgagcttgatagtgttcaattaagtttaacaaccgcggaatgcttgaaa
gaggcgggaccttgggggcaagcgtttccagaacccgtatttgacggcgagtttaaaatt
ttacagcaacgtttagttggcgaaaaacatcttaaaatgatggtcgaaccaaaacagggt
ggaccattgctcgacgccattgcctttaacgtcgatactcgttattatcctgacttgtcg
ataaaattagcaaaattggcatataaattagatattaatgagtttcggggcaatcgtcat
cttcagttattagtggattatattgtaccgatagggacttaa
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