Pasteurella multocida subsp. multocida Pm70: PM0342
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Entry
PM0342 CDS
T00046
Symbol
cafA
Name
(GenBank) CafA
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmu03019
]
PM0342 (cafA)
03009 Ribosome biogenesis [BR:
pmu03009
]
PM0342 (cafA)
Messenger RNA biogenesis [BR:
pmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PM0342 (cafA)
Ribosome biogenesis [BR:
pmu03009
]
Prokaryotic type
rRNA processing factors
PM0342 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AAK02426
UniProt:
Q9CNT3
LinkDB
All DBs
Position
403136..404611
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AA seq
491 aa
AA seq
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MDSVELLVNVTPSETRIALVDMGILKEVHIERQAKRGIVGNIYKGRVTRVLPGMQSAFVD
IGLEKAAFLHASDIVSHTECVEESEQKQFVVKDIAELVREGQDIVVQVVKDPLGTKGARL
TTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKELVLPLCDELGGFIIRTAADGATE
EELKQDADFLKRLWRKVLERRAKYPTKSMLYGELALTQRILRDFIGAGLEKIRIDSKLCF
TEVKQFTEEFMPTLVDKLVLYSGNQPLFDVYGVEAAIQTALNKRVNLKSGGYLIIEQTEA
MTTIDINTGAFVGHRNLEETIFNTNIEATKAIAQQLQLRNLGGIIIIDFIDMQTDDHRVR
VLESLQEALSKDRVKTSVNGFTQLGLVEMTRKRTRESLEHVLCGDCPACEGRGRIKTVET
VCYEIMREIIRVHHLFASEQFVVYASRAVADYLINEESHGLLAELEVFIGKQVQIKTEVY
YNQEQFDVVVM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggattctgttgagctgttagtgaatgtcacaccgagtgaaacacggattgccttagtc
gatatggggatcttaaaagaggtacatattgagcgtcaggcgaaacgtggtattgtgggt
aatatttataaagggcgtgttacaagagtattgccgggtatgcaatcggcatttgtggat
attggtttagaaaaagccgcttttttgcatgcttcagatattgtttcgcacactgaatgt
gtggaagaaagcgagcaaaagcagtttgtggtgaaagacattgcggaactggtacgcgaa
ggacaagatattgtggtgcaagtggtgaaagatcctttaggaaccaaaggggcacggtta
accacagatatcaccttgccttcacgttacttagtgtttatgcctgaaaatagccatgta
ggggtatcacaacggattgaaagtgaagaagaacgcgccagattaaaagagttagtcctg
ccgctttgtgatgaacttggtggttttattatccgtaccgcagccgatggtgcaacagaa
gaagaacttaaacaagatgcggattttttaaaacgtttatggcgtaaggtcttagaacgt
cgggcaaaatacccaacaaaatccatgttatatggtgagcttgcattaacccaacgcatt
ttacgtgattttatcggggcgggattagaaaaaattcgtattgactcgaaattatgtttt
acggaagtgaagcaatttactgaggaatttatgccgacgttggtggataagttggtgttg
tattcggggaatcagcctttgtttgatgtgtatggcgtggaggcggcgattcaaaccgcg
ttaaataaacgggttaatttgaaatctggtggctatttaatcattgagcaaaccgaagcc
atgaccactattgatattaatacgggggcatttgtagggcatcgtaacctcgaggaaacc
atttttaataccaatattgaagcgacaaaagccattgcccagcagcttcaattacgtaat
ctcggtgggattatcattattgattttattgatatgcaaaccgatgatcaccgtgttcgt
gtattagaatccctgcaagaagcactctctaaagaccgtgtcaaaacgagcgtaaatggc
tttacacaattaggtttggtagaaatgacgcgtaaacgaacacgtgaaagtttagaacat
gtgttatgtggcgattgccctgcttgtgagggacgtggacgtatcaaaacagtggaaacc
gtctgctacgaaattatgcgtgagattattcgtgtacaccatttatttgccagtgagcaa
tttgtggtctatgcctcaagggctgtggcagattatctcatcaatgaagaatcgcatggg
ttattagctgagttagaagtctttatcggcaagcaagttcaaatcaaaacagaagtgtat
tataaccaagagcagtttgatgtagtggtgatgtaa
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