Pasteurella multocida subsp. multocida Pm70: PM0611
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Entry
PM0611 CDS
T00046
Symbol
sbcB
Name
(GenBank) SbcB
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Pathway
pmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PM0611 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmu03400
]
PM0611 (sbcB)
Enzymes [BR:
pmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
PM0611 (sbcB)
DNA repair and recombination proteins [BR:
pmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PM0611 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PM0611 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PM0611 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AAK02695
UniProt:
Q9CN34
LinkDB
All DBs
Position
712101..713528
Genome browser
AA seq
475 aa
AA seq
DB search
MSTSPDFSFFIYDYESFGVDPASDRPAQFAGIRTDINFNIISDPVMFYCKQTNDYLPAPE
AVLVTGITPQECNEKGIPEPEFAERILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFID
PYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGIEHSNAHD
AMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGMLGNHRGN
TTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGILPVPLKL
VHINKCPILAPAKTLLPENAARLGIDRTFCLENLQRLKLSPPIRDKVTEIFNEERHFAPS
INVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDTRIPKLLFHYRARHYFNSLT
RAEQIQWQKYRHKKLDQVALQFEQSLQRLIAENSENPTNLALLQKVYEYGAKILA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcacctgattttagctttttcatttatgattatgagagttttggcgttgac
cccgcttctgatcgtcctgctcaattcgctggtattcgcactgacatcaatttcaatatc
atcagtgaccctgtcatgttttattgtaaacaaaccaatgattatttacccgcgcctgaa
gcggttttagtcacagggattacaccacaagaatgtaatgagaaggggattcctgaacca
gagtttgcggaacgtattttgcaagagttcagtcgtccaaatacgtgtgtgatgggattt
aataatattcgttatgatgatgaaatgacacgctataccttttatcgcaatttcattgat
ccctatgaatatagctggaaaaatggcaattcgcgttgggatttattggatttggttcgt
gcttgctatgctttacgcccagaaggtattaattgggcttatgatgaagaagggatgccg
tcatttcgtttagagaaattgactaaagccaatggcattgaacatagcaatgcacatgat
gcaatggcggatgtatatgccaccattgcgatggcaaaactgattaaagaaaaacaaccc
aaattatttcaatatttctttgaaaatcgcggtaaaaaagaagttgagaaactgattgat
actgcaaatctgacgccattggttcatgtttcaggtatgcttggtaatcatcgtggtaat
actacctggattgtgcctttagcctggcatccgaccaatcaaaatgctgtcatttgttgt
gacttagccgcaaatataacagatttactcaataaagatgctaacgaattacgtcaaaat
ctttatactcctaaagctgaattaattgaaaaggggattttaccggtaccattaaaattg
gtgcacattaataagtgtccaattcttgcgcctgctaaaaccttattacctgaaaatgca
gcgcggttaggtattgatcgtacattttgtttggaaaacttacagcgcctcaaattatca
ccacctattcgtgacaaggtcactgaaattttcaatgaagaacggcattttgccccaagc
atcaatgtagaaacagaactgtataatgggttctttgattacaatgataaaaacaacatg
gcgattttacgccatttaccagaagaaaagctggccgagcatggtttagcgtttaaagat
acgcgtatccccaaattattattccattatcgggcaagacattattttaatagcttaact
cgcgcagaacaaattcaatggcaaaagtaccgtcataaaaagttggatcaagttgcactg
caatttgagcagagcttacaacgtttaatcgcagagaatagtgaaaatccgactaattta
gccttattacaaaaagtctatgagtatggcgcaaaaatattagcctaa
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