Pasteurella multocida subsp. multocida Pm70: PM0615
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Entry
PM0615 CDS
T00046
Symbol
topA
Name
(GenBank) TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmu03032
]
PM0615 (topA)
03400 DNA repair and recombination proteins [BR:
pmu03400
]
PM0615 (topA)
Enzymes [BR:
pmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PM0615 (topA)
DNA replication proteins [BR:
pmu03032
]
Prokaryotic type
DNA Topoisomerases
PM0615 (topA)
DNA repair and recombination proteins [BR:
pmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PM0615 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_LysW
Zn_Ribbon_TF
DUF7351
Toprim_2
Toprim_4
CEP104_ZnF
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AAK02699
UniProt:
Q9CN30
LinkDB
All DBs
Position
complement(715517..718123)
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGSNYVVKSSVGHIRDLPTVGSSNGEKAKAISTKGLSAEE
KSAIKQEKDRNALVKRMGIDPYHQWKANYQILPGKEKVVAELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGDDARFSRVVFNEITKNAIQQAFEKPEQLNLDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLVVEREREIKAFQPEEYWEIDVLTQTQAKQAL
RLAVTQFKGKKFEPKNATQAQSAVDFLQHADYVVSDLETKPTHSRAKAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALKMVRGYIQSHYGESYLPSKPVF
YSSKENAQEAHEAIRPSDVNTLAEQLTGMDKDAVRLYDLIWRQFVACQMPAAQYDSTTVT
VRAGEYELKAKGRILRFDGWTKVLPTMSKNAEDQVLPDVQLNEKLHLEHVLPEQLFTKPP
ARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRVENRRFYAEKMGEIVTDRLNQSF
TALMNYDFTANMENILDQIANGEKNWKTELNQFFKDFSQQLSQAELDELEGGMKPNSLVP
TDINCPTCGRKMAIRTASTGVFLGCSGYALPPKERCKTTMNLIPEAELLNVLDEASETKA
LMERKRCPKCGTAMDSYLIDPERKIHICGHNPNCDGYVLEQGSFKIKGYDGPIVECDKCG
ADMHLKLGRFGKYMGCTSCDNTRKILKSGEVAPPKEEPTHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRAPKVAELALYRDRLPEKLRYLADAPQHDPEGNDAIVRFSRKEKR
QYVTSEKNGKATKWIVDYLGNQWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttggttattgtggagtcgccggcaaaggcaaaaaccattaataaatat
ctaggcagtaattatgttgttaaatctagtgtgggccatatccgtgatctccctacggtc
ggttcaagtaatggtgagaaagcaaaagcaatttccacgaaaggattaagtgcggaagaa
aaaagcgcgattaagcaagaaaaagatcgcaatgcgttagtcaaacgtatgggaattgac
ccttatcatcaatggaaagccaattaccaaattttgcctggcaaagagaaagtagttgcc
gaattaaaatcgttagccaaaaaagccgatcatatctatcttgcgaccgacttggataga
gaaggagaagccattgcttggcatttgcgtgaggtgatcgggggggatgatgcacgtttt
agtcgtgtcgtatttaacgaaatcacgaagaacgcgattcaacaagcctttgaaaaacca
gaacaactgaatttagatcgtgtaaatgcccaacaaacccgtcgctttttagaccgcgtg
gtcggttttatggtgtcgcctttattatggaaaaaagtagcccgaggcttatctgctggg
cgtgttcaatctgttgctgtcaaattagtagtagaacgtgagcgtgaaattaaagccttt
cagcccgaagaatattgggaaattgacgttttaacgcaaacgcaagcgaaacaagcatta
cgtttagccgtgacccaatttaaagggaaaaaatttgagccgaaaaatgccacgcaagca
caaagtgcggtagattttttacagcatgctgactatgtggtttccgatttagaaacgaaa
ccaacccattctcgagcgaaggccccttttattacctcgacattacagcaaaccgccagt
acacgtctagggtttggtgtaaagaaaaccatgatgctcgcacagcgtttatatgaagct
ggttatattacctatatgcgtacagactccacgaatttgagtcaagatgcgttaaagatg
gtgcgtggctatattcaatcacattatggtgaaagctatttgccgagcaaacctgtgttt
tattcaagtaaagaaaatgcacaagaagctcatgaagcaattcgtccatcggatgtcaat
acattagcagagcaattgacaggcatggataaagatgcggtacgtttatatgatctgatt
tggcgtcagtttgtcgcttgccaaatgccagcggcgcaatatgacagtacaacggttacg
gttcgcgcgggagagtatgaattaaaagcgaaaggacgtattttacgttttgatggttgg
acaaaagtcttacctacaatgagtaaaaatgctgaagatcaagtgttgccagatgtgcag
ctgaatgaaaaattgcatttagagcatgttttacccgaacagttatttaccaaacctcca
gcacgttttagtgaagcggcgttggtcaaagaacttgaaaaacgtgggattgggcgtccc
tctacatacgcagcaattatttcaacgattcaagaacgtggctatgtacgagtggaaaat
cgtcgtttttatgccgaaaaaatgggcgaaattgtcactgaccgtttaaatcaatctttc
accgcgttgatgaattacgatttcaccgccaatatggaaaacatcttagaccaaattgcg
aacggtgagaaaaattggaaaaccgaacttaatcaattctttaaagatttttcgcaacag
ttaagccaggcggaactggatgaattagaaggtggaatgaaaccaaatagtttagttcca
accgatattaactgtccaacttgtggtcgtaaaatggcaattcgcaccgcaagtactggg
gtgtttttaggttgcagtggttatgccttgccaccaaaagagcgctgtaaaactacaatg
aacttaattccagaagctgaattgctcaatgtgttagatgaggcttctgaaaccaaggcg
ttaatggaacgtaaacgctgtccaaaatgtggtacagcaatggacagttatctaattgat
ccagaacgtaaaattcatatttgcgggcataatccgaattgtgatggttatgtgttagaa
cagggcagtttcaagattaaaggctatgatggtccgattgtcgaatgcgataaatgcggt
gcggacatgcatttgaaattgggtcgttttggtaaatacatgggctgcaccagctgtgat
aatacccgtaagattctaaaaagtggggaagttgcaccaccaaaagaagaaccgactcat
ttcccagaactgaaatgtgaaaaatcggatgcttattttgtattacgtgatggggcaagt
ggtgtgtttatgtccgctcataattttccaaaatcgcgtgaaacccgcgcaccgaaagtg
gctgaattagcattatatcgtgatcgtttgccagaaaaattacgttatttagctgatgca
ccacaacatgatcccgaaggtaatgatgctattgtgcgttttagtcgtaaagaaaaacgt
caatatgttacttctgaaaagaatggtaaagcaacaaaatggattgtggattaccttggt
aatcagtgggtagagcgaaaaaaataa
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