KEGG   Pasteurella multocida subsp. multocida Pm70: PM0906
Entry
PM0906            CDS       T00046                                 
Symbol
hfq
Name
(GenBank) Hfq
  KO
K03666  host factor-I protein
Organism
pmu  Pasteurella multocida subsp. multocida Pm70
Pathway
pmu02024  Quorum sensing
pmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PM0906 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PM0906 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmu03019]
    PM0906 (hfq)
   03036 Chromosome and associated proteins [BR:pmu03036]
    PM0906 (hfq)
Messenger RNA biogenesis [BR:pmu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PM0906 (hfq)
Chromosome and associated proteins [BR:pmu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PM0906 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AAK02990
UniProt: Q9CMC6
LinkDB
Position
1064798..1065088
AA seq 96 aa
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARSVSHHNNSNNSNQQNYQQEQQTDSNVEKAE
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcaaaaggacaatctttacaagatccttatttaaacgcattacgtcgtgaacgtatc
cctgtttccatttacctcgtaaatgggattaaactacaaggtcagattgaatcatttgat
caatttgttattttattaaaaaatacagttaatcaaatggtgtacaaacacgcaatttca
actgttgttcctgcgcgctcagtgtctcatcacaataatagcaataattccaatcaacag
aattatcaacaagagcaacaaactgacagcaacgtagaaaaagcagaatag

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