Pasteurella multocida subsp. multocida Pm70: PM1840
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Entry
PM1840 CDS
T00046
Symbol
srmB
Name
(GenBank) SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pmu
Pasteurella multocida subsp. multocida Pm70
Brite
KEGG Orthology (KO) [BR:
pmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmu03009
]
PM1840 (srmB)
Enzymes [BR:
pmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PM1840 (srmB)
Ribosome biogenesis [BR:
pmu03009
]
Prokaryotic type
rRNA helicases
PM1840 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
WSD
Cas3-like_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AAK03924
UniProt:
Q9CJZ8
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All DBs
Position
2079149..2080477
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AA seq
442 aa
AA seq
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MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLL
PAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHG
EIFNSNQDIVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFASRLLTEPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLA
RFIDEEQVSRGIVFVRRREEVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVT
VLVATDVAARGIDIEDVSHVMNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLL
GKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKARIKAKREEKQKQEQKKKVKL
RHKDTKNIGKRRKSNTPPANAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacattagccacttttcaagattttgatctcgctcctgccttactgaaagcactcgct
aaaaaaggctacactcgtccaacagcgattcagcaagaaacgattcccgccgccatggaa
caacgtgacgtgctaggttctgcaccaacaggtaccggtaaaacagccgcctttttactg
ccagccattcagcacttactcgattatccacgtcgcaaaccaggcgccccacgtatttta
attttaacgccaactcgtgaacttgctatgcaagtagcagagcaggcagaaagctttgcg
gaattcacgaatttgagtatcgcgaccattaccggtggtgtggcttaccaaaaccatggg
gaaatttttaacagcaatcaagatatcgtagtggcaaccccaggacgcttattgcaatac
attaaagaagaaaactttgattgtcgttccgtcgaaatgctcatcttcgatgaagcggat
cgcatgcttcaaatgggttttggacaagatgctgaaaaaattgccgctgaaactcgctgg
cgtaaacaaaccttgctattttccgccacattagagggcgaattactggtggatttcgcc
agtcgattattaacagaacccgtgcaaattgacgctgagcccagtcgccgtgagcgtaaa
aaaattcagcaatggtattatcatgctgacagcaatgaacacaaaatcaaattattggca
cgttttattgatgaagaacaagtgagccgaggtattgtgttcgtacgtcgacgtgaagag
gtgcgtgaactgtccgaaactttgcgtaaacgcggtattcgttccacctatttagaaggt
gaaatggcacaaactcaacgcaataacgctattgataaacttaaaaatggtattgtgacg
gtcttagtagcaactgatgtcgccgcacgtgggattgatatcgaagatgtcagccatgtc
atgaacttcgacttaccatacagcgcagatacctatttgcaccggattggacgtactgca
cgcgcaggtaaaaaaggcgtagcggtgtcttttgtggaagcccatgattataaattgttg
ggtaaaatcaaacgttacacccaagaattactgaaagcacgtattatcgaaggcttagcc
cctcgcaccaaagcaccgaaagagggagaagttaaaacggtcagtaaaaagcaaaaagcc
cgcattaaagcaaaacgtgaagagaagcaaaaacaagagcaaaagaaaaaagtgaaactg
cgtcataaagatacaaaaaatattggtaaacgtcgcaaatccaataccccccctgctaac
gcagaataa
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