Podarcis muralis (common wall lizard): 114581829
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Entry
114581829 CDS
T06059
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114581829 (CASC3)
03015 mRNA surveillance pathway
114581829 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114581829 (CASC3)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114581829 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
114581829
NCBI-ProteinID:
XP_028558302
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All DBs
Position
13:complement(26351383..26370480)
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AA seq
708 aa
AA seq
DB search
MADRRRQRASQDSSEDEESDSPPGSAAPSPRGAHRSGLAVAGGGGGSGAAVDAVSAEAPV
TVGGSPADSECESEDGIEGDAVLSDYESADDSEAEEGEYSEEETSKVDLKRESNETNELT
RKSDKGDEKPESKGTVAGERQSGDGQESTEPIENKVGKKLPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRS
THNPDDIKPRRVRKPRFGSPPQREPDWANERPSKPPRHQSLESTPMPPRTFINRNSAGTG
RMPPPRTFPRPGGYKETRPCYRAVDVNSQHAPRFSEQSKHENNYRSRRLEPLPPREPSPE
VEIPHIRNSPVKKEEVVSESPAAPADVLQPPPDRPVEKKSYSRARRTRTKAGETGKLAEE
VPLPLGLTPAPLKTTEVIPSPSPAKTGNWEVPVEASLDGLEQDITQLNITEQNWSPGQPQ
FIQPQGIPNQMHIGAAPPPQFNRMEEMGVQAGRAKRYSSQRQRPVPEPAPPVHISIMEGH
YYDTLQFQGPIYTHSENPAPLPPQGVIVQPEMHLSHPGLHPHQTPAPLTNPGLYPPPVSM
SPGQQPPPPPPQQLLAPTYFSPPPGVMNFGNPSYPYPPGPLPPPPPPHLYSNAQAQSQVY
GGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSRNEKSKERNNT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtcggaggcagcgcgcctctcaggacagcagcgaggacgaggagtccgac
tcgccgcccggcagcgcggccccttccccgcggggcgcccaccgctctggcctggccgtc
gcgggagggggcggcggcagcggcgctgctgttgacgccgtgagcgcggaggcgccggtg
acggtgggaggcagcccggccgactcggagtgtgaaagtgaagatggcatagaaggagat
gctgttctttctgactatgaaagtgctgacgactcagaggctgaagagggggaatacagt
gaggaggaaacatccaaagtggacctgaagcgggagagtaatgaaactaatgagctgaca
agaaaatcagacaaaggggatgaaaaaccagaatcgaaaggcactgtggcaggcgagagg
cagagtggagatggccaggaaagcactgaaccaattgagaacaaggttggcaaaaagctt
cctaagcacctggatgatgacgaggaccggaagaaccctgcatacatacctcgcaaaggt
cttttctttgagcatgaccttcgtgggcaaactcaggaagaggaagtccggcctaagggc
cgccagcgcaagctgtggaaagatgagggacggtgggagcatgacaagttccgggaagac
gagcaagcaccgaaaacaaggcaggagctgattgctctttatgggtatgatatccgctca
acgcacaaccctgatgacatcaagcccaggagagtgcgcaaaccaagatttgggagtcca
ccacagagagagccagattgggccaatgaaaggcctagtaagccaccacggcaccagagc
ctagaaagtactcccatgccgcccaggacattcatcaacaggaactccgcagggacaggg
cggatgcccccaccgaggactttcccaagacccggtggctacaaagagactcgtccatgc
taccgtgctgtggatgtgaacagccagcacgcacctcgcttcagtgagcagtcaaagcat
gagaacaattaccgttccaggcgtttggagcccctcccgccacgagagccttctcctgaa
gtagagattccacacattcgcaacagccctgttaaaaaggaagaggtggtttcagaaagc
ccagcagctcccgcagatgttctgcagccaccaccggataggccagtggagaagaaatca
tactcccgggcaaggaggactcggaccaaagcaggcgagacggggaagttggctgaggaa
gtcccgcttccattggggttgactcctgcaccactgaagactactgaggttataccatcc
ccctcaccagcaaagactggtaactgggaggtgcctgttgaagccagcctagatgggctc
gagcaagacataacccagttaaatataacagagcagaactggagcccagggcagccccag
ttcatacaacctcagggtattcctaaccagatgcacattggagcagccccaccccctcag
ttcaacaggatggaggagatgggtgttcaggcaggccgtgcaaagcgttactcatcgcag
cgtcagaggcctgtcccagagcctgctccgcctgtgcacataagcataatggaagggcac
tactatgacacactacagttccagggaccgatctacactcacagcgagaatcctgccccg
ctgcctccccaaggggtgattgttcagccagaaatgcatctctcccatccagggttacat
ccacaccagacaccagcacctttgaccaaccctggtttatatcctcctcctgtctccatg
tcgccgggacagcagccgccgcctcccccaccgcaacaactgctagcaccgacctacttc
tcccctccccctggagtgatgaattttggcaatcccagttacccctaccctccaggacca
cttccgccaccaccacctccccatctgtattccaatgctcaagcccagtctcaggtgtat
ggaggggtcacctattacaacacagtccagcagcaagtgcagcccaaaccttcaccaccc
cgaagaacttcgcagcctgtcactatcaagccgccacctcctgaggacagcagaaatgag
aaatccaaagaaaggaacaacacttaa
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