Podarcis muralis (common wall lizard): 114582149
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Entry
114582149 CDS
T06059
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04518
Integrin signaling
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114582149 (COL6A3)
04518 Integrin signaling
114582149 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114582149 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114582149 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114582149 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114582149 (COL6A3)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114582149 (COL6A3)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114582149 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
114582149 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
DUF6559
Motif
Other DBs
NCBI-GeneID:
114582149
NCBI-ProteinID:
XP_028558777
LinkDB
All DBs
Position
1:complement(134712224..134817380)
Genome browser
AA seq
2949 aa
AA seq
DB search
MRKHRHLPLATIFCLLLSGYHNADAQQQGAAQESADIIFLIDGSNNIGAGAIAAIRDFLA
NFIEKLTVGAEHIRIGVVTYSDQPRTAFFLNSYTQKADILNAVKALSLPGGEEANIGEAL
EHVVQNHFTRSGGSRIEEGVPQILVLISGSESSDDLREGILAIKKASIFSFSIGVENADN
VELQQIATDGSFVYTALDTSNLGELQDLLLPNIVGVAQRLILLDGPTMLTEVVEVNRRDI
VFLIDGTAALGAAPFNAIRDFVAKIIQKLEIGPDLVQVAVAQYAETVRPEFYFNTFQNRK
DVLASVRKIRPMGGAALNTGSALRYVKDNLFTSAAGSRINEGIPSMLVLITGGTSQDDVA
EPAQEVKRNRIFILAVGARKADRAELEQIAYEPSLVFSPSEFRTPILVNTLNDILSPLKT
LSGWIEVTPSGKVLLNKRDIIFLLDGSANVGNANFPLVRDFVVSLVGSLDVGIDDIRIGL
VQFSENPKTEFFLNTFLTKAEVLDHLRQLRLLGGSVLNTGAALDFVRENHFTEAGGSRID
ESVPQVLVYLAAGRSVDSFDQAAQSLARAGVLTFCVGVKDADLTELQRIAYNPQMVFLKD
EFSSLANVPQEMIGQITTYYVEESAVPENKFDILFLIDGSANLMGQFVAVRDFLHRIISD
LDVGPDAIRVAVAQFSDNVQLEFNFEDIPNKQDILQKVKRMKIKTGRLLNIGAALDYAKR
EVFVTSAGSRIEEGVPQLLMLLAAGRSSDSVDVPADALKQSGIIPFAIKSRTADRSELER
IAFDPQFVLVADSLSRIGDLQFQIGSLLKAIPSQPSAEESPKKDVVFLIDGSDGMRSIFP
EVKSFVQGLVDNLDIGPDKVQVAVAQYSSRVQPEFLLNRYQDKAEVIRAIQRLSAMRGPA
PYTGAALNYLRSNVFTSQAGSRLSEGVPQILFLLTAEKSSDDVTRPALDLKTSGAVPFGI
GIGNADATEMQTISFVPQFVYLVPGVAQLGSLKSTLSQTVAELTGPKITSLATALPSPVD
ERRDVVFLIDGSQFAAAEFPSVVEFIERLVNNMNVGSATTRVSVIQFSNDPRVEFLLNAH
STKDEVQAAVRRLRPKGGRQVNLGSALEYVSKNIFTKPSGSRIEEGAPQFLIILFSRPPD
DDLEDPVVQVKSVGVAPFPIGVNMDYEELVKIALSPQYVFQISTYQDLPSLEQKLLAPVT
TLTSQQIQSLIGDTSYPPIDIDSEAKDIVFLIDTSDNVKRDDAAHIRDFIIQIVQMLEIA
PSKTRVGVVQFSNDVFPEFSLREHKTRGAVIDNLRRLRYRGGAPLNVGKALEFVMKNYFV
KSAGSRREDGVPQHLVLLLGGRSEDDVSRPAAKMQTSGIKSLGVGSGNADNEELRIITND
PRTVFFVREFTELPSIGKRFYASFEAPQEPTLSPPDVFPDGKKQADVVFLLDGSINFGKD
NFQEVINFIYGIIDAIYEDGDSINVALVQYNSDVSDEFFLKDFSKKDDILTAVEKVTYKG
GRVADTGAAIKHVQAKHFVKEAGSRADQKVPQIAFIITGGKAEDDAQAASLALARSGVKV
FAVGVKNIDLGEVTKLSSDGTTAFRAATAQELSELNEAVLVTLSDTMKEQLCRPVGEVSK
DCDLDVILGFDVSDVGPGQSIFASQKVLESKVNHILNTITQMQKISCTASQAPRVRVALL
AQTRSGVVEAFDFSEYQPELFEKFQALHNGGPYVLTAETLKSYQNKFRASPAGTVKVVIH
LTDGIDGARGQLAAASDDLKREGVKALIFVGLERAANFDEVMKLEFGRGFTYNRPLRVNL
QDIDFELAEQLDNIAEKACCGVPCKCSGQRGDRGLPGSIGPKGSSGENGYRGYPGDEGGP
GDRGPPGINGTQGFQGCPGERGTKGGRGFQGEKGELGEAGLDGIDGEEGDRGHPGSPGDR
GGPGRRGAKGVKGERGERGDRGLRGDSGTPGPDVTQPGAKGQKGELGQTGEPGRDGPAGT
PGGPGRNGEQGRRGPAGIKGNRGPAGTPGSVGEPGPRGPQGAPGTIGTPGLRGEQGLPGP
RGGGGPPGVAGERGRLGPLGKKGEPGNPGPKGPNGPTGPRGETGDDGRDGVGRAGAKGRK
GEPGFPGYPGIRGAPGDNGGVGDPGPKGSRGLRGSAGAPGVRGQKGENGYPGPEGLKGDR
GEARDQCTLVRSIKDKCPCCYGPRECPVYPTELAFAIDTATGGSADIFNRTKQAVLTIVN
NITIAESNCPRGARVALVTYNSEVTTEIRFADSRRKGNLIKQIQELQMPQTSKQRSLETA
MSFVARNTFKRARSGFLMRKVAVFFSNGPTRASPQLNDAVMKLYDAGVVPVFLTSREDRP
LINALQINNTGGQAIVFSGNRDQLSQIIRRVMTCHVCLDVCDPDSSCGPTRPFNRDRRAA
PTDVDIDIAFILDSSESTTHLQFREMKNYISYVVSQLETSSDPKVSRHHARVAVIQHAPY
EFESNSSTSPVQVELSLTDYGSKDKMMDFISNKMAQLYGTRAMASAIEYTTRHIFESAPN
PRDLKVIVLMMTGEIKSKELEHLQRVIVEAKCKGYFFVILGIGRKVNIKSIYSLASEPND
VFFKYVDKPSELHEEALLRFGNLLPSFISSENAFYLSPDIRKQCDWFQGDQPVKKFGQKE
VNIPNNVTSTPTTTTKEKLEVVKHAGEVQITDITENSAKLHWVNPEPQHVFVYDITITSA
HDHSLVLKLNLTGTERVIGGLRSGQKYNVFVTGYHNAQAKATYRGTFSTKSMPLPKLPAA
AVANLMVNTAPLEGPETDPCLLDLDMGTQCKEYQVKWFFDFKNKICTQVWYGGCGGNANR
FETEADCISRCLKPSDERVMQLPVLGKSPLSGQKVHKKKLRRKLPRRKLESRAKKVARAA
TDICQLQKEEGTCRNFILKWYFDLKTKSCARFWYGGCGGNENRFDTQKDCEKVCISAPVN
PGVVTTIGT
NT seq
8850 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacaccggcatttgcctttagcaaccatcttttgtcttttactctcaggctac
cataatgctgatgcccagcagcaaggagctgcacaagaatctgctgacattattttcctt
attgacggatcaaacaacatcggcgctggcgctatcgcagccattcgtgatttccttgca
aattttattgaaaaactcacagttggagctgagcacatacgcattggggtagtgacgtat
agtgatcaacccagaactgcattcttcttgaacagctacacccaaaaagctgacatttta
aatgcagtgaaggcccttagcttgccgggtggcgaggaagcgaatatcggggaagctctt
gagcatgtggtgcaaaaccacttcacccggtccggaggcagcaggatagaggagggtgtc
ccccagatcttagtgctgataagcggcagtgagtctagcgatgaccttagagaggggatt
ttggccataaagaaagcgagtatattttcatttagcattggggtcgagaatgctgacaat
gtagagcttcagcaaattgctactgacggaagcttcgtgtatactgccctggacacaagt
aaccttggcgaacttcaagatctcttactgccaaacattgttggagtggcccagaggctc
attttgttagatggcccaaccatgcttacagaagttgttgaagtcaataggagggacata
gtcttcctgatagatggcacagcagccttgggagctgcccctttcaatgcaattcgtgat
tttgtggccaaaatcatccagaaactggaaattggaccggaccttgttcaagttgcagtg
gcacaatatgcagaaactgtaagacccgagttctatttcaataccttccagaacagaaaa
gatgtccttgcaagtgtcaggaaaataaggccaatgggtggtgctgcactcaacacaggc
tctgcactgaggtatgtgaaagacaacttattcaccagcgctgctggaagcaggatcaac
gaaggcataccatcaatgctggtccttattactggtggaacgtcccaagacgatgttgcc
gaaccagcacaggaagtgaaaaggaatcgcatattcatcctggctgttggagcccgaaaa
gcggatcgtgcagaactagaacaaattgcctatgaaccatccctagtattcagtccttcc
gagttccgcacacctatcctggtaaatactctcaatgatattttgtcacccctgaagaca
ctgtccggatggattgaagtaacaccaagtggaaaagttctgttaaataaaagggatatc
atctttcttttggatggatcagccaacgttggaaatgccaacttcccattggtccgtgac
tttgttgtgagcctagttggctcccttgatgttggaattgatgatatacgaatcggccta
gtgcaatttagtgagaatccgaaaacagaattctttttaaacacttttctaaccaaggca
gaggtcctcgatcatctaaggcaattgagactccttgggggatcagtactgaatactggt
gctgcactagactttgtccgtgaaaatcatttcaccgaagccggtgggagcaggatagat
gaaagcgttcctcaggttctagtctaccttgcggcagggcgatctgttgattcattcgat
caggccgcccaatctttagctcgtgcaggagtgctgaccttctgtgttggtgtgaaagat
gctgatttgacagaacttcagcggattgcatacaatccacaaatggtatttcttaaggat
gaattcagttctctggcaaacgtgccacaggaaatgattggtcaaataacaacatattat
gttgaagaatcagcagttccagaaaacaagtttgatatcttgttcttgattgatggctcg
gctaaccttatgggtcagtttgttgctgttcgggactttttgcaccggattatttctgac
ctggatgtgggtcctgatgccatacgtgtagctgtggcacagtttagtgataacgtgcaa
cttgagttcaactttgaagacatcccaaacaagcaagacatccttcagaaagtgaaaaga
atgaagataaaaacagggaggttgctcaacattggtgctgcgttagattacgccaagagg
gaagtatttgtgacgagtgctggaagcaggattgaggaaggagtgccacaactacttatg
ctccttgctgctgggagatcaagcgatagtgtggatgtccctgctgatgctctgaaacaa
agtggaattattccctttgctatcaaatccaggactgcagatcgtagcgaattagaaagg
atagcgtttgaccctcaatttgtgctagttgctgactccctttccagaattggagaccta
caatttcaaataggcagtttgctgaaagccattccgtctcagccatcagctgaggaatct
ccgaagaaagatgttgtgtttctgatagacggttcggatggcatgcgaagcattttccca
gaggtgaagtcctttgtgcaaggtttggtcgacaatttggacattggtcccgacaaagtt
caggtggccgtggcccagtacagcagccgtgtgcagccggagtttcttctgaatcgctac
caagacaaggccgaagtgatcagggccatccagagattgtctgccatgcgaggccctgcc
ccttatacaggggctgcccttaactacctgaggagcaatgtattcaccagccaggctgga
agcaggttgtctgaaggggtcccacagatattgttcctgctgactgcagaaaagtcaagc
gatgatgtcacaaggcctgccttggatctcaagacgagtggtgcggtgccgtttggcatt
gggattggaaatgcagatgccactgagatgcagacaatttctttcgttcctcagtttgtg
taccttgtcccaggtgtcgctcagctgggctccttaaaatcaacgctttcacaaacggtg
gctgagttgaccgggccaaaaataacctctttggccacagcgcttcctagcccagtggat
gagaggagagatgttgtcttccttattgacggctcccagtttgcagctgctgaatttcct
tcagttgttgagtttattgagagacttgtaaacaatatgaatgtgggctctgctactact
cgggtttctgtgattcagttcagcaatgaccccagggttgagtttctgctgaatgcacat
tccaccaaggatgaggtccaagctgcagtgagaagactcagacccaaaggagggaggcaa
gtcaaccttggatcggccctagaatatgtgtcaaagaacatatttacgaagccctcagga
agtcgcatagaagagggcgcacctcagtttttaataattctcttttcccgcccacctgat
gatgatttagaggatcctgtagtccaagtcaagagtgttggtgtggcaccatttcctatt
ggagtgaacatggattatgaggaattggtcaaaatagctcttagccctcagtatgtgttc
cagatatcaacctatcaggatcttccaagtctggaacagaaattgctggcccctgttaca
acactaacttcgcagcagatacaaagccttattggtgacacaagttatccccctatagat
attgacagtgaagcaaaggacattgtctttctcatcgacacctctgacaatgtcaagcgg
gacgacgctgctcacattcgagattttattatccagattgtccagatgttggaaattgca
ccaagcaaaacaagagttggtgttgtccaattcagcaatgatgtattccctgagttctcc
ttaagagagcacaaaacaagaggtgccgtcatagacaaccttcggcgcttgcggtacaga
ggaggtgctcccctgaatgttgggaaagccttggagtttgttatgaagaactactttgtt
aaatctgcaggcagtagaagagaagatggagtcccacagcatttagttcttttgcttggg
gggagatcggaggatgatgtcagcagacctgctgccaagatgcagacatctgggattaaa
agcctgggtgtaggatcagggaatgcagacaatgaagaattgcgaataattaccaatgat
ccccgaactgtatttttcgtgagagagtttactgagctcccatcaatagggaaaaggttt
tatgcatcatttgaggcaccccaagaaccgacactctcgccgcctgacgttttccctgat
ggcaaaaaacaagcagacgttgtctttttgctggatggctccatcaactttgggaaagac
aatttccaagaagtgattaactttatatatggcatcattgacgctatttatgaagacggc
gattccattaatgttgccttggtgcagtacaactcagatgtgagtgatgaattcttcctg
aaggatttctccaaaaaagacgatatcttaactgctgttgagaaagtaacatacaaagga
ggcagagttgctgatactggagcagccatcaagcatgtccaagcaaaacactttgtgaag
gaggctggcagcagggcagatcagaaggtccctcagattgcatttattataacaggaggc
aaggcggaggacgatgcgcaggcagcttctttagcactggcgcggtcaggtgtcaaggtg
tttgcagttggagtgaaaaacattgaccttggtgaagttaccaaactctccagtgacggc
accacagctttccgggcagcaacggcccaggaactctcggagttgaatgaggctgtgctg
gttaccttgagtgataccatgaaagagcagctgtgcagaccagtgggggaagtctcaaaa
gattgcgatctggatgttatactcggatttgatgtatcagatgtcggaccagggcaaagc
atatttgcttcgcagaaggtgctggagtcaaaggtcaatcacattctgaacacgattact
cagatgcagaaaattagctgcactgccagccaagcacctcgagtgcgggtggctctcctg
gcgcagactcgctctggagttgtggaagcatttgacttttctgagtaccagccggagttg
tttgaaaagttccaagctttgcacaatggtggcccatatgtcctaactgcagagacactc
aaatcttaccagaacaaattcagagcatctcctgctggaaccgtgaaggttgtaatacac
ttaaccgatggcattgatggtgctagagggcagctagcagctgcatctgacgatctgaag
agagaaggtgtcaaggctctcatttttgttggcttggagcgagcagcaaatttcgacgaa
gtgatgaagctggaatttgggcgtggtttcacttacaatcgacctcttcgagtgaatctg
caggatatagactttgaactggcagagcaactagacaacattgcagaaaaggcatgctgt
ggtgtcccatgcaaatgttcaggacagaggggagacagaggactgccagggtctattgga
ccaaagggatcttcaggggaaaatggctacagaggttatcctggagatgaaggcggacca
ggtgaccgtgggcctccaggtataaacggaactcaaggattccaaggttgtcctggtgaa
agaggaactaagggaggtcgtggatttcaaggggaaaagggtgaattgggtgaggctggt
ctcgatggaatagatggggaagaaggagacagaggccatcccggttctcctggggacagg
ggaggccccggtagacggggtgccaaaggagtcaaaggagaaagaggagagcgtggcgac
cgtggattgcgaggagattcgggcacaccaggacctgatgtcactcagccaggagctaaa
ggccaaaagggtgaacttggacaaacgggagaacctggaagagatggaccagcaggtacc
cccggaggacctggaagaaatggagaacagggcagaagaggacctgcagggatcaaagga
aacagaggtccagcaggtacaccaggatctgtgggagaaccgggtccaagaggaccacag
ggagcgcctgggaccattggaactccaggtcttcgaggagagcaaggcctgcctggtcca
aggggcggtggaggcccaccgggagttgctggggagcgtggccggctgggtcctcttggg
aaaaagggcgaacctggcaatcctggtccaaagggtcccaatggtcccactgggccccga
ggagagacgggagatgatggacgagatggagttggcagggcaggagctaaaggcagaaag
ggagagcctggtttcccaggatatccaggaataaggggtgcgcctggagataatggtggc
gttggagatcctggccccaaaggaagcagaggtctcaggggaagtgcaggggcacctggc
gtacgaggccaaaaaggagagaatggatatcccgggccagagggactcaagggtgacaga
ggagaagcaagagaccaatgcacccttgtacgcagcatcaaagataaatgcccctgctgt
tatggtcccagggaatgtccagtttaccccacagaactggcatttgctatagacaccgcc
actgggggaagtgcagacattttcaacagaacgaagcaagcagtgttgacaattgtcaac
aacatcacaattgctgaaagcaactgtcccaggggtgcccgggttgcgttagttacctat
aacagcgaagtcaccactgagatccgttttgctgactcccggaggaaaggaaatctcatc
aaacagattcaagagctccaaatgccacagacctcaaaacagcgaagcttagaaacggcc
atgtcttttgtggccaggaataccttcaaacgtgcccgcagtggcttcctcatgcggaag
gtggctgttttcttcagcaatgggccaacaagagcatctcctcaacttaacgatgctgtc
atgaaattatatgatgcgggagttgtgcctgtgttccttacctccagggaggacagaccc
ctcataaatgcactgcagatcaacaatactggtgggcaagccatcgtattttctggcaac
agggatcaactgagccaaattattaggagagtaatgacgtgccacgtttgtctagatgta
tgtgatcctgattctagctgtggtcccacaagaccttttaacagagacagacgggctgct
cctacagatgttgacattgatatagcattcattctagacagctctgaaagcaccacccac
ctgcaattcagagagatgaagaactacatttcgtatgtagtaagccagctggaaacaagc
tctgaccccaaggtatcccggcaccatgccagggtggccgtcatccaacatgctccctat
gagtttgaatcaaactcaagtacatctcctgtccaggtggagttgtcactgacagattat
ggatccaaagacaagatgatggatttcattagcaacaaaatggcacagctgtatggcaca
cgggctatggcgagtgcaattgaatatacgacaaggcacatctttgagagtgcgccaaac
cctagagatctcaaagtcatagtcttgatgatgactggagagattaaaagcaaagaactc
gaacaccttcagagagttattgtagaagctaaatgcaagggatacttctttgtcattttg
ggcattggcaggaaagtgaacatcaagagcatctacagtttggcaagtgagcccaacgac
gtcttcttcaaatatgtcgataagccctctgagctccatgaagaggctttgctgcgcttt
gggaacctcttgccgtcttttattagcagtgaaaatgccttttacctgtctccagacatc
aggaaacaatgtgattggtttcaaggtgatcagccagtcaaaaaatttggccagaaagaa
gtaaacattccaaataatgttacctctacacctactactacaacaaaagaaaaactggaa
gtggttaagcatgcaggtgaagtccaaataactgatatcacagaaaacagcgctaaactg
cactgggtgaaccctgaacctcaacatgtctttgtctacgacatcacaatcacctccgca
catgaccactctctagtcctgaagctcaatttaactggcactgaacgggtcattggaggc
ctccggagtgggcagaaatacaatgtctttgtgactggctaccacaatgcacaggccaaa
gcaacctacagaggaacatttagcacaaagagtatgccattgcccaagctacctgcagca
gctgtagccaatctgatggtgaacactgcccctttggaaggtccggaaacagatccttgc
ttgctggaccttgacatgggcacgcagtgcaaggagtatcaggttaagtggttctttgac
ttcaaaaacaagatctgcacccaggtttggtatggtgggtgtggcggtaacgccaataga
tttgagacagaagctgactgcattagcagatgcttgaagccatcagatgaaagagtcatg
cagctgcctgtccttgggaaaagtcccttatcaggacagaaagtgcacaagaagaagtta
cggaggaaattacccagaaggaaattggaaagcagagcaaaaaaggtagcaagagcagcc
acagatatctgtcaattgcaaaaagaggaagggacctgcaggaactttatcctcaagtgg
tattttgatctaaaaaccaaaagttgtgctagattctggtatggtggctgcggtggaaat
gaaaacagatttgacacacagaaagactgtgaaaaagtctgcatttcagctcctgtcaat
cctggtgttgtaacaacaatagggacttaa
DBGET
integrated database retrieval system
