Podarcis muralis (common wall lizard): 114582405
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Entry
114582405 CDS
T06059
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmua01001
]
114582405 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmua04121
]
114582405 (TRIM28)
Enzymes [BR:
pmua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114582405 (TRIM28)
Protein kinases [BR:
pmua01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
114582405 (TRIM28)
Ubiquitin system [BR:
pmua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114582405 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
zf-RING_2
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
YaaC
Motif
Other DBs
NCBI-GeneID:
114582405
NCBI-ProteinID:
XP_028559246
UniProt:
A0A670JGJ5
LinkDB
All DBs
Position
13:28621056..28654445
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AA seq
864 aa
AA seq
DB search
MSAPATAPAPAEAAGGGGAGDKQRSSTAAAAAPLNVEGIDLLEKCGVCRERLRSERDPRL
LPCLHTVCKECMKVEPAAAAAAAAAGGNNKDGQVVDCPVCKHQCYLKDIVENYFLRDGAT
ESFGDAREANQCCTSCEDNAPATSYCVECQEPLCETCVEAHQRVKYTKEHTVRSTGSSKS
QEREKTVYCSVHKHEPLVLFCDTCDTLTCRDCQLNVHKDHQYQFLEDAVKNQRKMLASLV
KRLGDKHANLQKSTKEVRTSIRQVADVQKRVQVDVKMAILQIMKELNKRGKVLVNDAQKV
TEGQQEKLERQHWAMTKLQRHQEHILRFANWALESDNNTALLLSKKLIYFQLHRALKMIV
DPVEPHGDMKFQWDLNAWTKSAETFGQIVSERSGLLATPNAQTPQQRANATSAASGGVAV
RQGSVPPSQGVQQMSLQTSILNKGALLQPVLPSNSQRQAIPDCYINDASASSAGQPMDMG
DGFGVEGSYSGEANVSGMKRSRGQDGEGGTVRKVPRVSLERLDVDLTSDNQPPVFKVFPG
SSTEDFNLIVIERGVQQAAAAAAAAAHLAGLPAAVKEEQMEAAIDHPASLDAKDTKPVVL
PQDALLPEGSLAPRLISPSGSTSSAMEMQSVHSHDGTANGDEAASCRVCMKAGAVVMCDG
CKKCYHLDCHLPALLEIPSQEWKCLLCEQPVRSIEEDGTDLTPVSIDGEVKILSAADQQR
CEQVLLELLCYEPCRPLHRLSNTIEGQNTIDLTLIRAKLQRKLSPPYGSPDEFADDVWKM
FRQFNKLTEDKEDVQSIIGLQRFFEAKLSAAFGDRKFSALRDPINVDEPQESGLLPVRGS
PATDLGEATSSKPDGSGEDEGMAT
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcctgcgacggcccctgcccctgcggaagctgctggcggaggcggcgctggg
gacaagcagcgctcttccaccgctgccgccgccgccccgctcaacgtggaaggcatcgac
ctgctggagaaatgcggcgtgtgccgggagaggctgcgctccgagcgggacccgcgcctc
ctgccttgcctccacaccgtctgcaaggagtgcatgaaggtcgagcccgccgccgccgcc
gccgctgcagcagccggcggcaacaacaaggatggccaagtggttgactgcccagtgtgc
aagcaccagtgttacctaaaagacatagtggagaactacttcctgcgggatggtgcaaca
gagtcttttggggatgccagagaagctaaccagtgctgcaccagctgtgaagacaatgcc
ccggccaccagctactgtgtggagtgccaagagcccctgtgtgagacttgcgtggaggct
caccagagagtgaagtacactaaggaacacactgtccggtccacaggctcttccaaatcc
caggagagagagaagacagtgtactgctccgtccacaagcatgagccactggtgctgttc
tgcgacacttgcgacaccctcacctgccgcgactgccagctgaatgtgcacaaggatcac
cagtaccagttcttggaggatgcggtcaagaaccaacgcaagatgctggcttcgttggta
aagcgcctgggagataagcatgccaacctccagaagtccaccaaggaagtgcgaacctcg
atccggcaggtggcagatgtgcagaagcgagtgcaggtggatgtgaagatggccatcctg
caaatcatgaaggagctcaataagcggggcaaggtgctggttaatgatgcgcagaaagtc
accgaagggcagcaggagaaactggagagacaacactgggccatgacaaagctccagcgc
caccaggagcatatcctacgctttgcaaattgggccctggagagcgacaacaacactgcc
ttgctgctttcgaagaagctgatttacttccagctgcacagggctctcaaaatgatcgtc
gatcccgtggagccccatggagacatgaaattccagtgggacttaaatgcttggaccaag
agcgcagagacatttggtcagatagtctcggagcggagtggcttgctggcgacccctaat
gcccagaccccccaacagcgggccaatgctacctctgctgcatctggaggagtggcagtc
aggcagggctctgttcctccttctcagggtgtccagcagatgtctctgcagacaagcata
ttgaataagggagctctgcttcagcctgtgctgccttccaacagccagcggcaggcaatc
cccgactgctatatcaatgatgctagtgcctcttctgctggacagccaatggacatgggt
gacggctttggcgtagaaggatcatactctggtgaagccaatgtttctggaatgaagagg
tcccgtggccaagatggagagggtggcaccgtgcgcaaggtgccccgtgtcagtctggag
cggctggatgtggacctgacatcggacaaccagccacctgtcttcaaggtgtttcctggt
tcttccactgaagacttcaatctcattgtgatcgaacgtggggttcagcaagctgcagct
gcggcagctgccgctgcccatttagcagggctgccggcagcagtgaaggaggagcagatg
gaggcagctattgaccacccagcttctcttgacgctaaagacactaagccagtggtgctg
ccccaggatgctttgcttccagaaggctccttagcgccccggctcatctcccccagtggc
agcaccagctctgctatggaaatgcagtctgttcacagccatgatggcactgccaacggg
gacgaagctgcttcctgcagagtctgcatgaaagctggtgctgtggtcatgtgtgatggc
tgcaagaagtgctaccacctggattgtcacctgcctgctctcctggaaatccccagccag
gaatggaagtgtctgttgtgtgagcagccagtgagatccattgaagaggatgggaccgac
ttgactccagtctccatagatggggaggtgaagatactgtcagctgctgaccagcagaga
tgtgagcaggttctccttgagttactgtgttatgagccatgcaggcctctccaccgactc
tccaataccatagaggggcagaacaccattgacttgaccttgatcagagccaagctgcag
cggaagctctcgccaccctatggctctcctgatgagtttgcagatgatgtctggaagatg
ttcaggcagtttaataagctgacagaggacaaggaggatgtccagtccatcattgggctg
cagcgcttctttgaggccaagctgagcgctgcctttggcgaccggaagttctcggcactc
cgcgaccccatcaatgtggatgagccgcaggaaagcggccttcttcctgtccgtggctcc
ccagccaccgacctcggtgaggccacctcttctaagcctgatgggagcggtgaggacgag
ggaatggccacctaa
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