Podarcis muralis (common wall lizard): 114582535
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Entry
114582535 CDS
T06059
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmua03016
]
114582535 (TSEN34)
Enzymes [BR:
pmua01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
114582535 (TSEN34)
Transfer RNA biogenesis [BR:
pmua03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
114582535 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
SVIP
Motif
Other DBs
NCBI-GeneID:
114582535
NCBI-ProteinID:
XP_028559458
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All DBs
Position
13:complement(37698188..37704157)
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AA seq
281 aa
AA seq
DB search
MIRIHILEGKAFVWNAADARRLREEHRIVGTLVGALARKPRQNVRLGLPLQLLPEEVRLL
AEKGLAALFKNAASQPLRDDKSQDPSALEEVAAYQNEQEESYQEQVRLAAEQRKAVLGTL
AERIAQGRAKKRRQEEGDPPAEPESTFVLPRQSMMVQLPTERVHPGPEEEVDWHVPSQDW
PYAGQEEHEIHYRIFQNLWERGYYVTSGSKFGGDFLVYPGDPMRFHAHYIALCVSKDTPL
SLCDVVSAGRLGTNVKKTVLLCSVDQDGTAVFTSLQWSGMQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatccatatcttggagggaaaggcttttgtgtggaatgctgctgatgcgcgg
agattgcgggaggagcatcgtattgtcggcacactggttggagcgttagctcggaagccg
cggcagaatgtgcggctggggctgcccctgcagctgctcccggaagaggtccggttactg
gcagaaaaggggttggcagccttgttcaaaaacgcagcgtcccaaccccttcgagatgat
aaaagccaggatccttcagcccttgaggaggtggccgcctaccaaaacgagcaagaggag
agctatcaggagcaggttcggctggcggctgaacagaggaaagctgtgctgggtactctt
gcggaacgtatagcccagggccgggcaaagaaacggcggcaggaagagggagatcctcct
gcagaaccggaatccacctttgtgcttcctcgacaatctatgatggtccagctcccaaca
gaacgagtacatccaggcccagaagaagaggtggactggcatgtcccatcccaagactgg
ccttatgctggacaggaggagcacgagatacattaccgcattttccagaatctttgggaa
cggggctactacgtcaccagtgggagcaaatttgggggcgacttccttgtttatccaggt
gaccccatgcgtttccatgcccattacatcgccctgtgtgtctctaaagacacccctctc
tccctgtgtgatgttgtcagcgcaggacgccttggcaccaacgtgaagaagacggtgctt
ctgtgttcggtggaccaggatgggactgcagtctttacgtccttgcagtggagtgggatg
cagtga
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