Podarcis muralis (common wall lizard): 114584093
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Entry
114584093 CDS
T06059
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03440
Homologous recombination
pmua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114584093 (PALB2)
03460 Fanconi anemia pathway
114584093 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114584093 (PALB2)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
114584093 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
114584093 (PALB2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
114584093
NCBI-ProteinID:
XP_028561430
UniProt:
A0A670KH80
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Position
14:29892370..29906447
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AA seq
1277 aa
AA seq
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MAHAQRYSLAPGECCVSMDAVSLVQLLRRRSWREVRGAQRAGDMEPPRGHFPALNAQEKA
QLKEKLALLKREYSKTFHRLQRAERAEKVNNYVKKMVAEKNLLLMQEEAEGDLADGGCSK
KSAAKAASVTFKPEAFNQEDSLLGNLSSSCSNQDRKRVLFSPVLKKNQNSLSRSRTKVQQ
RASLALEEREESTWDAPLGNVGPQPESSQGSRSPVFNRSDSLWTDHSIPVASSGNTAEEG
RGSDVSPVLLHLDCLQETSGQATFLHDLSRENQESSPEHLCEEGLFDSSGGPAVKNIVSP
ADMQIESPQIEKEAGRFADLAVTIEAASHTHGMQQEVSRCQEPQKLELSGGDAPTSKPSG
NGLGDQLEETGSPLLDRAPATPAKDVLSSCTVVEGLLFPVEYYVRTTRRMSSQQREVNLA
AVIQTQLGKSRKGQRIVCKEKSTDPASSSSQGQTESGEQREAVPLPFPDSGASPGTSPLQ
SLSNENTSSSGDLVQSEGLVQPRRKRRLRGRSNHKALPATAEDPAENVELTIPKVDSSLV
PSEAQGRKENHHGRDKATVLYITAGGSVESKPSGRKWPAESAVSASTHPETELETVHVSQ
VVNSKASVPSSFMGSLGENDKTCCPDSGSPEQAGNWNNTGVNLAQVDRDPLPHYAPLVAS
VKCKRRGAPRGRRRASLPVESQDPTSLYLFGTGSPKLSLPFHGKRSKMSSLEWLPCGLEL
QEFHLPEDEFGLLKLEKLKACAVNLPETFDTGQSAKCLQDTSGAGFEKDSALGENPISLE
KEPPFPVGSPRKALPSTELFLSLALEGVPESQLPTPVFPRLGATPASQALPGTPGASALQ
AHASPEPGDSAGISALPRSRQEEEEGGGERMPSLSQGQREKSWKPEEDVASFEERLLSAG
ESVECYKESPKQEERAEEPMNEVTVEDLAEDSQRKGSLRMTSKLKSCSGSCSVDVGTVWW
EAADFTALCVVTACEASISLWRHLESGHWGCVHTWHFTKVPVIQIVPLPGVQSLVCVALG
GLEISEIRFLFYSSEDGCVKQPLIKTGNINAVLGLKNRRLVSSCGSLQDQEVEVLSFSET
GRSKERQVLMPPEETVLAFAEVDGMEEALIALTTTDCLVVWNLTTGQLLRKVPLGSSYPG
SVCHKAYSDSGLLFVVLSHPHAKESNSWVNPAFQVVVLNPKTARSARLMSLSLPLGITGR
YLEGEVKGASAAAVLTSGTIAVWDLFWGQCTALLPPNSEGSWSLARWSVTDTCLLAGQKD
GSVYIYSYTTALRDSLG
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatgcgcagagatattccctcgctccaggcgaatgttgcgtttccatggacgcc
gtttcgctggttcagctactgcgcaggcgcagctggcgcgaggtgcgtggcgcgcagaga
gcgggagatatggagcctccgcggggccacttcccggccctcaacgcgcaggagaaggcc
cagctgaaagaaaagttggccttattgaaaagagaatacagcaaaacattccacaggtta
cagcgtgctgaaagagctgaaaaggtgaacaactatgtcaagaaaatggttgcagagaaa
aacctgttgcttatgcaagaggaagctgagggggaccttgcagatggtggctgttcaaag
aagagcgctgcaaaagctgcatcagtcaccttcaagcctgaggccttcaaccaagaagac
agcttgctaggaaacttgagttcttcgtgtagcaaccaggaccgcaaaagggttctcttt
agtcctgttcttaagaaaaaccagaatagtttgtcaagaagtagaaccaaagtgcaacag
agagcatctttggctttggaggaaagagaagaatctacatgggatgcacctctgggaaat
gtgggaccccagccagagagctcccagggctccaggtcaccagttttcaacagaagtgac
agtttatggacggaccatagcatcccagtggcctcctcagggaacacagctgaagaagga
agaggcagcgatgtttctcctgtgttgctgcatctggattgtttacaggaaacatctggg
caagccacctttcttcatgatctgtcgcgtgaaaaccaggagtcttcacctgagcatctt
tgtgaggaaggtctgtttgatagctctggaggtccagctgtcaagaatattgtgtcacct
gcagacatgcagattgaatctccacagatagagaaggaggcaggccgatttgcagactta
gctgtgaccattgaggctgcctctcatacacatggaatgcagcaagaagtcagccgatgc
caggaacctcagaaattggagctcagcggcggtgacgctcccaccagcaagcccagtgga
aatggtttaggggatcagcttgaagaaactggatctcccctcctggatagggctccagcc
acacctgctaaggatgtgctgagctcttgcacagtagttgaggggctcctgtttcctgtt
gagtattacgtaaggacaacacggcgaatgtccagtcaacagagggaggtgaacttggcg
gccgtcattcaaacccagctgggcaaaagtaggaaaggacagagaattgtgtgcaaggag
aagagcacagatccagcctcgtcgtcctcccaagggcagacagaaagtggtgagcagagg
gaggctgttcctttgccatttcccgattctggtgccagccctggcacttctcctcttcag
tctctttctaacgagaacacatcttccagcggggatctagtacagagtgaaggcctagtg
cagcccagaagaaagagaaggctaagagggaggtctaatcacaaggccttgcctgccaca
gcagaggacccagcagagaatgtggagctgacaattcccaaggttgatagttctcttgtg
ccaagtgaagctcagggaaggaaggaaaaccaccatggaagagacaaagccacagtgctt
tacattacagctggtggcagcgtggaatccaagccaagtggcagaaaatggccggcagag
tctgcagtttctgcttccacacaccctgagactgagttagagactgtccatgtctcacag
gtggtgaactcaaaggccagtgttccctccagcttcatgggaagcctgggagaaaatgac
aagacatgttgccctgacagtgggtctcctgagcaggctgggaattggaacaacactggg
gtcaatctggcacaagtggatagagaccccttgcctcactatgcacccctagttgcctct
gtgaaatgcaagcggaggggagcaccccgaggtagaaggagggccagcctgcctgtggaa
tctcaggatcctacctcactttacctctttgggacaggttcccccaaattgtcccttcct
tttcatggcaagagaagtaagatgtccagtcttgaatggctgccctgtggcttagagctc
caagaattccacctacctgaagatgaatttgggctccttaaactggaaaagctcaaagcc
tgtgctgtaaatctgccggagacttttgacactggccagtcagccaagtgcctccaggac
actagtggggctggctttgagaaagattcagcactaggagagaatcccatttccctggag
aaagagccaccctttccagtgggctcccctcggaaagctcttccatcaactgagttgttc
ctctctctagccctggagggtgtcccagagtcccagctgcctaccccagttttcccccgt
ttgggggcaaccccagcctcccaggccttgccaggcacacctggcgcatctgctctgcaa
gctcatgccagccctgagccaggggactctgcaggtatttctgccttgcccaggagcagg
caagaggaagaagagggaggtggcgaaaggatgccctcattgtcacaaggccaaagggaa
aagagctggaagcctgaagaggatgtggccagctttgaagaaaggctgctatcagctggc
gagtctgttgagtgttacaaggaatcccccaaacaggaagaaagagcagaggagcctatg
aatgaagtgaccgtagaagacctagcggaggacagccagagaaaagggagcttgcggatg
acctcaaaactaaagagctgctctggatcatgctcggtggacgtgggcaccgtgtggtgg
gaggccgctgacttcacagcactgtgtgttgtgacagcttgtgaggcttccatttcgctc
tggaggcatctggagtctggccactggggctgtgtgcacacctggcactttacaaaggtt
ccggtcattcagattgtccctcttccaggtgtccagagccttgtgtgtgttgcattggga
ggactggagatttcagagatcaggttcttgttttattcttctgaagatggctgtgttaag
caacccctcatcaaaactggaaacataaatgctgtccttggactaaagaataggaggctg
gtcagtagttgtgggtcactccaagaccaagaagtggaagtcctctctttctctgagaca
ggaaggagtaaagagaggcaggttttgatgcctcctgaagagactgttttggcttttgct
gaagtggatgggatggaggaggctttaattgccttgactaccacagattgcttggtggtc
tggaacttgacaactgggcagctgctgaggaaggtgccccttggttcttcctacccagga
tctgtctgccacaaagcctattctgactcgggcctcctgttcgtagttctgagccacccg
catgccaaggagagcaactcatgggtgaaccctgccttccaggtggttgtgctcaacccc
aagacagcgaggagtgccaggctgatgtccttatcccttcccctgggaatcacaggaagg
tatttggagggtgaagtgaagggcgcttctgcagcagctgtgctaacatctggaaccatt
gctgtctgggatttattttgggggcagtgcacggctctgctgccccccaactctgaaggg
agctggtctctcgccaggtggtctgtcactgacacttgtctgctggctgggcaaaaggac
ggcagtgtttacatttacagttacacaacagctttgagggactcgcttggttag
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integrated database retrieval system
