Podarcis muralis (common wall lizard): 114585078
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Entry
114585078 CDS
T06059
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03030
DNA replication
pmua03420
Nucleotide excision repair
pmua03430
Mismatch repair
pmua03440
Homologous recombination
pmua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114585078 (RPA1)
03420 Nucleotide excision repair
114585078 (RPA1)
03430 Mismatch repair
114585078 (RPA1)
03440 Homologous recombination
114585078 (RPA1)
03460 Fanconi anemia pathway
114585078 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmua03000
]
114585078 (RPA1)
03032 DNA replication proteins [BR:
pmua03032
]
114585078 (RPA1)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114585078 (RPA1)
Transcription factors [BR:
pmua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114585078 (RPA1)
DNA replication proteins [BR:
pmua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114585078 (RPA1)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114585078 (RPA1)
MMR (mismatch excision repair)
114585078 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
114585078 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
114585078
NCBI-ProteinID:
XP_028563176
LinkDB
All DBs
Position
15:complement(786164..818824)
Genome browser
AA seq
623 aa
AA seq
DB search
MAARLSEGAIAAMMQGENVNNPVLQLITIRAISTGTGPQRYRMLMSDGVQTLSSFMLATQ
LNDLVNDQGLSANAICKINRFIINVLKDGRKVVIVMDLEVLQTADMVAGKIGNPVQYTEG
TLQAGQQQSSGSLATNQAPSRPAHPNESTAAAATAAGSASKYITPSKVPGKAGGSSFLST
PGGSQTKVVPIASLNPYQSRWTICARVTQKGQVRAWSNSRGEGKLFSIELVDESGEIRAT
AFNEQVDKFFPLIELNKVYYFSKGHLKTANKQYTTVKNDYEITFSNETSVVACDEAQHLP
SVKFDFVPIGDLESADRDALVDVIGICKSCEDLTKITIKSSNREVLKRVVHLMDMTGKGV
NVTLWGNDAENFDGSKQPVVAIKGVKVSDFGGRTLSVVSSSSILINPDIPESFKLRGWFD
SEGQLLESTSISGTRTGPMGGADTNWKTLHEAKSENLGQGDKADYFSCLATVVYLRKENC
MYQACPSPDCNKKLVDLQNGLYRCEKCDREFSNFKYRMILSVNIADFQDNLWLTCFQESA
ETILGQNTAFLGELKEKNENAFDEVLQKASFTTHVFRVRVKQETFNDESRLKATALDVKP
VNHQEYSRRLIGTIRKNAAQLGC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggctcagcgagggggccatcgcggccatgatgcaaggagagaatgttaat
aatcctgtcttgcagctcattaccatccgagctatctccactggaaccggcccacagcgt
taccggatgctgatgagtgatggcgtgcaaaccctttcctctttcatgctggcaacacag
ctgaacgacctggttaacgaccagggcttgagtgcgaatgccatctgcaagattaacagg
ttcatcattaacgtcctgaaggatggaaggaaggtggttattgtgatggatttagaagtc
ctccagacggccgacatggtggcagggaagataggcaacccagtgcagtacactgaaggc
actttgcaagcagggcagcagcagagctctgggagcctggcaaccaaccaagcccctagc
aggccagcacatccgaatgagagcacagccgcagcagccacagcagcagggtctgcgtca
aaatacatcaccccttcaaaggtgcctgggaaggcaggcggctccagcttcctgagcacc
cctgggggctcccagaccaaagtggtgcccattgccagtctgaacccgtaccagtccagg
tggacaatttgcgcccgggtgactcagaagggccaggtccgtgcatggagcaactcacgc
ggggaagggaagcttttctccatcgaattggttgatgaaagtggtgagatcagagcaacg
gccttcaatgaacaagtggacaagtttttccccctcattgagttgaacaaggtctattac
ttctcaaagggccacctgaagacggccaacaagcagtacacgaccgtgaagaacgactac
gagatcacgttctccaacgagacgtccgtcgtcgcctgcgatgaagcgcagcacctcccc
tctgtgaagtttgacttcgtccccattggtgacctggagagcgcagacagagacgccctt
gtggatgtaattgggatctgcaagagctgcgaggacctcacgaaaatcaccataaagtct
tccaatcgagaggtgctgaagagagttgtgcacttgatggacatgactgggaaaggagtg
aacgtcactctgtggggaaacgacgcagagaacttcgacggctctaagcagcctgtggtg
gccatcaagggagtcaaagtctcggattttggtggccggactctctctgttgtttcatcg
agcagcatcctcatcaaccctgacatcccagagtccttcaagctgcgtggatggtttgac
tctgaagggcagctcctggagtccacctccatctcaggcacaaggactgggcccatggga
ggtgcagacaccaactggaagactctgcatgaggccaaatccgagaacctggggcaagga
gataaggcagactacttcagctgcttggccacagtggtgtacctgcgcaaggagaactgc
atgtaccaggcctgcccatccccagactgcaacaagaagctggtcgacctgcagaacggg
ctctaccgctgcgagaaatgtgaccgggagttctccaacttcaagtaccgcatgatcctc
tcggtcaacattgctgatttccaggacaatttgtggttgacttgtttccaggaatcggca
gagaccatccttgggcagaacacagccttcctgggagaactgaaggaaaagaatgagaac
gcctttgatgaggtgctccagaaagccagcttcaccacccatgtattccgggtcagagtc
aagcaagagactttcaacgacgaatcgcgcctgaaggcgacagcgttggacgtcaagcct
gtcaaccaccaggagtacagcaggaggctgatcgggaccatcaggaagaatgctgcccag
ctgggatgctga
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