Podarcis muralis (common wall lizard): 114585453
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Entry
114585453 CDS
T06059
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03440
Homologous recombination
pmua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114585453 (BRIP1)
03460 Fanconi anemia pathway
114585453 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114585453 (BRIP1)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114585453 (BRIP1)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
114585453 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
114585453 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
114585453
NCBI-ProteinID:
XP_028563963
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All DBs
Position
15:4930820..5173322
Genome browser
AA seq
1307 aa
AA seq
DB search
MASSASEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNSKQHCLLESPTGSGKSLALLCSA
LSWQQSLYDKPLDDLPCSKECKKPETMMPCGCRCHAAQAQNSVAVSQDASCSFTNSGTVT
PVKSGTKSRNKADEISRTTLASKLSAKKQASLHEDGDDDFIVDRKRIRSLETDQQARKRH
RLSQGTQLVDALEVYRQQKNGELTVCSEKSAPFSLKTLQPSSACIQCSCSSVEAKVKEAT
DKKKKENGGKAFVPKIFFGTRTHKQIAQITREMRRTAYSDIPMTILSSRDHTCVHPTVSS
CSSKNEKCVELLEAKNGTSCSYYHGVHKLSEHHALKSARKKYQAWDIEDLVSLGKKLRAC
AYFAARELMAEARIVFCPYNYLLDSQIRESMEIDLKDQVIILDEAHNIEDCARESASYNV
TETQLKLAREELDTMVNNNIRRKDHEPLRAVCCSLTNWLRETIGQLVERNYETSSKVWSG
KQMVAFLHDMGITNATFPILQKHFAAVLEKEEKVNLFNGGEELVSVPIISPSTQIMLKGL
FMVLGYLFKENHRFAEDYRVALQQAYIWTNENPVDTPDENGFFARSKRRSRQKTAVHTLS
FWCLNPAVAFSDMCGNVRSVVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVGT
VGAGPKGRSLCATFQHAETFDFQDEVGELLLSVCQTIGQGVLCFVPSYKMLDKLKDRWLH
TGLWEKLELIKTVIVEPKGGNKADFDELLQVYYDAIKFKEGKDGALLIAVCRGKVSEGLD
FSDDNARAVVTIGIPFPNVKDLQVELKRKYNDLHSKDRGLLPGSQWYEIQAFRALNQALG
RCIRHRSDWGALILVDDRFRRNPNKYIAGLSKWIRQLVQHHENFDCALGSLDAFAKTNQK
STDSLTQGNDRSALMSSSSKDLSSSSFLEATLHLSPGVTVEREVHDLTLETLSAADVIAI
NPATSSQSCNISANQQNLQPFCQTVKQENLTDSKPKTLIGKNKREKANNLLSSVSIKQYF
SKPLTSTPLLALNEKDLSKAKCQPKIPMDESTQLVANEPQQNVFLLEQQRATGLSPCREP
ISFSAGKAIQEYPTEQQLWAHEEGRDVAFSPVRGNANLSTSDIAAETDANDDSIYFTPEL
FNSVESAVQKKELSTHTCSETGISFETASSIKVEELYDASALKLVDAMVSIKTDADTKAE
EPGIVQSSESTGGAVRAAGHSTNSIGEAEQEAKRKKLSRSQNKGLKVQRTYKRRIRKPSI
KGGAKSLTGDAESSNLQVGTVLYSLEVRNIALSNCLHADPPGCSEPV
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcagcgtcagaatacaccattggaggtgtgaaaattctcttcccttgcaag
gcatacccttcacagcttgctatgatgaatgcaattgtgaaggggctcaactccaagcag
cactgcctgttggagagtcctactggaagcgggaaaagcctggcgttgctttgctctgca
ttgtcatggcaacagtcactttacgacaaaccgcttgatgacttgccatgttcaaaggaa
tgcaagaagccagagactatgatgccatgcggctgtcgctgtcatgcagctcaggcccag
aacagtgtagcggtgagccaagacgcatcttgttccttcaccaacagcggaacagtgaca
cccgtgaaaagtggaaccaagtcaagaaacaaagcagatgagatatcaagaaccacactc
gcttccaaactatctgcaaagaagcaggcgtctttgcatgaagatggagatgatgatttt
atagtagataggaaaaggattcgttcattagaaacagaccagcaggcaaggaaacggcac
cggctgtcccaaggaacccaattggttgacgctctggaggtttaccggcagcagaaaaat
ggggaattgactgtgtgctctgaaaaatcggcccctttctctctcaaaacattacagcct
tccagtgcctgcattcagtgctcctgttcttcagtcgaagcaaaagtcaaagaagcaact
gataaaaagaagaaagaaaatggaggaaaggcatttgtccccaaaatattttttggaact
cgcacccacaaacaaattgctcagattaccagggagatgcggaggacggcatattcagat
atccccatgactattctttctagcagggaccacacttgtgtccatccaacagtgtccagc
tgcagcagcaagaatgaaaaatgtgtagagttgctggaagccaaaaatggcacatcttgt
tcttactaccatggagtccataagcttagcgaacaccatgccttaaaatctgcacgtaag
aaataccaggcttgggacattgaagacctagtgagcctcgggaagaagctacgtgcctgt
gcctatttcgcagctcgagagcttatggctgaggctaggattgtgttttgtccttacaac
tatcttctagactcacaaataagagagagtatggagattgacttgaaagaccaggtgatc
attttagatgaagctcataatattgaggattgtgcacgggaatcggccagctacaacgtg
acggaaactcaactcaaattggcccgagaggagctggacaccatggtgaataacaacatt
aggaggaaggatcacgaaccattgcgtgctgtatgctgcagtctgacaaattggttgagg
gaaactattggtcagcttgtggagagaaattatgagacctctagtaaggtttggagtgga
aaacaaatggtggcgttcctgcatgatatgggaataaccaacgccacatttcccatctta
cagaaacattttgctgctgttcttgaaaaggaggaaaaagtaaacctgttcaatggagga
gaagagcttgtttcggttccaattataagcccttcgactcagattatgctgaaggggtta
ttcatggtcctggggtatctttttaaagagaatcacaggtttgctgaagactacagagtt
gcattgcagcaagcctacatttggactaatgaaaatccagttgatactccagatgagaat
ggtttctttgcacgatcaaaaagaagatcccgacaaaaaacagcagtgcatacactcagt
ttctggtgcttgaatccagctgtggccttctcagacatgtgtggcaatgttagatcagtc
gtgttgacctcaggaacgctctctccgatggactccttttcttctgagcttggtgtgaag
ttttccattcaacttgaagcaaaccatgttattaggaattcccaggtgtgggttggtact
gttggagctgggcctaaaggcaggtcattatgtgctacgttccagcacgctgagaccttt
gatttccaggatgaagttggggagcttctgctctcagtttgtcagaccatcggccaaggg
gttttgtgctttgtgccatcttacaagatgttagataaactgaaagatcgctggctgcac
actggcttatgggaaaagcttgaactgattaagacagtcatcgtggaacctaaaggaggc
aacaaagctgactttgacgagctgctgcaagtatactacgatgccataaaatttaaagaa
ggaaaagatggggcacttcttattgctgtctgcagaggcaaagttagtgaaggcttggat
ttctctgatgacaatgcccgtgctgttgtaaccataggaattccatttccaaacgtgaaa
gaccttcaggttgagcttaagaggaagtataatgacctacattccaaagacagaggactt
ctaccaggcagccagtggtatgaaatccaggccttcagagctctcaaccaagcattgggc
aggtgtattcgccacaggagcgattggggagcacttattttagttgatgaccgcttcaga
aggaacccaaacaaatacatagctggattgtcaaaatggattcgtcagctagtccagcac
cacgaaaacttcgattgtgcccttggttctttggatgcgtttgctaaaacaaaccagaag
agcacagattctttgactcagggtaacgacagatctgcgctcatgtcttcaagctcaaaa
gatctgtcatcaagttctttcctggaggcaactcttcatctatcaccaggtgttactgtt
gaaagagaagtgcatgatttaaccctagaaacactttctgctgcagacgtcattgcaatt
aatccagcgacatccagtcagtcatgtaacatatctgcaaatcaacaaaatcttcagcca
ttctgccagactgtaaagcaagaaaacctaaccgactccaaacccaaaaccttgatcggg
aagaacaagagggagaaagcaaataatctgctctcatctgtcagtataaaacagtatttc
agtaaaccattgacttcaacacccctgcttgccctgaatgagaaagacctctccaaagct
aaatgccaaccaaagataccaatggatgaaagtactcagcttgttgcaaatgaaccccag
cagaatgtgtttttgcttgagcaacagagggcaactggattgtcaccatgtagagaaccg
attagcttttctgctggaaaggccattcaagaatatcctaccgagcagcagctctgggct
catgaagaggggagggacgtggcgttttctccagtgagaggaaacgcgaacctttcaaca
tcagatatagctgcagagacagatgccaacgatgacagtatctatttcacacctgaactt
ttcaacagtgtcgagtcagcagtacagaaaaaggagttgtcaactcatacttgcagcgag
actgggatttcctttgaaactgcaagctctattaaagttgaagagctttatgatgccagt
gctctaaagctagtagatgcaatggtcagcattaaaactgatgctgacacgaaggcagag
gagcctggaatcgttcagagcagtgagagtactggaggggcagtcagagcagctggacac
agtactaatagcataggtgaagctgagcaggaggcaaagagaaagaagctttccagatca
caaaacaaaggactgaaagtacagagaacatataaacgaagaatcaggaaaccatctatt
aaaggaggggccaagtcactgacaggagatgctgagagttccaacttgcaagtcggtact
gtgttatattctctggaggtgagaaatattgccttaagtaactgtctccatgcagaccct
cctggctgttctgagcctgtatag
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integrated database retrieval system
