Podarcis muralis (common wall lizard): 114586096
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Entry
114586096 CDS
T06059
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114586096 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114586096 (SMG5)
03032 DNA replication proteins [BR:
pmua03032
]
114586096 (SMG5)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114586096 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
114586096 (SMG5)
DNA replication proteins [BR:
pmua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
114586096 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
WHD
Motif
Other DBs
NCBI-GeneID:
114586096
NCBI-ProteinID:
XP_028564874
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All DBs
Position
16:16934992..16968224
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AA seq
1059 aa
AA seq
DB search
MSQGSGSGGGGGGGGGEPEAKALHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISL
RNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHL
IAGIGFYQHLLLYIQSHYQLELQGCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCL
VYLGDLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSNYYNVEATYCY
LRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQ
SLLQPKSSSADSELTSLCQSVLEDFNLCLFYLPSSPNTSSANDDEEECENGYSFLPDLLI
FRMVIVCLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFRN
DGTEDLEARESLNSIEREAEGDLANHRPSEEQRKSESKKGKKYSRLSCLRRRRHVQKVDE
SDLSEGFDSDSSPDSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDE
PDAEGGSQAKGMKNGAPEALDSAEGDVGRLVDLKSPGVAKTEPLLEPPVANGPGLLGASD
ASIASNLQAMSTQLFQTKRCFRLAPTFSNVLLKPNCELPAPKEVADSKPCVNGDVEKSKM
TEQDDVSESEESVSSSKSCRNERSLQEKLEIITNEGLLPTVKVFLDWLRTNTDLIIMCAQ
SSQSLWNRLSVLLNLLPSAGDLQDSGLFLCNEVKSMLPGCELPDLPACLLLPEDMALRNL
PPLKNAHKRFNFEQDRPLLAEVEESVVRICCIRSFGHFITHLQGSILQFNPEVGIFISIA
QSEQDGLLQQAQAQFRMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQCVMSPYL
VPDTQALCQHLCTIRQLAASGRFIVIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGN
RYIRCQKEVGKSFERHKLKRQDLDAWNLYKILDSCKQLTTSQGGSEDDSSGMVTILTGFQ
LDDPSKLSAPMKSAIQAAANASVEIKNVLEFYKQWKEMG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggcagcggaagcggaggaggaggcggcggcggcggcggggaacccgaggcc
aaagctctccacaccaagaggctctaccgagctgtggtagaagccgtgcatagactggat
ctcattcttggaaacaaggcagcttatcaagaagtttttaaaccagagaacatcagcctg
agaaacaagttacgtgaactatgtgtgaagctgatgttcttgcacccagtggattatggg
aggaaagcagaagagctgctgtggaggaaagtttactatgaagtcattcagctcattaaa
acaaacaaaaagcacattcacagtcgcagcaccctagagtgtgcctaccggactcacctt
attgctggcatcggcttttaccaacaccttcttctctatatccagtctcattatcagtta
gagctgcagggctgtattgactggacacatgttacggatcctctgataggctgcaagaag
cctgtatctgcatcggagaaggagatggaatgggcgcagatggcctgccaccggtgtctg
gtttacctgggggatttagctcggtatcagaacgaattagcaggtgtggacacagaattg
ctggccgagagattttactatcaagccctttctgttgcaccacaaattggtatgcctttt
aaccagctggggacactggcggggagcaactactacaacgtggaagccacctactgctac
ctgcgctgtatccagtctgaagtgtcctttgaaggtgcttatgggaatctcaaacgcctg
tatgataaggcggccaaaatgtatcaccagctgaagaaatgtgaaaccaggaaactgtca
cccagcaaaaagaggtgcaaagacattaagaggttactggtgagtttcatgtacttgcag
agcctccttcagccaaagagcagttctgcagactctgagctgacgtctctctgccagtca
gtactggaggatttcaacctctgcctcttctacttgccctcttcgcccaacacgagctct
gccaatgacgacgaagaggagtgcgagaatggctactccttcctgccagacctcctcatc
ttccggatggtcattgtctgtctgatgagcgtccacagcctcaagagggcaggctccaag
cagtatagtgcagccattgcattcacactggccctcttttcgcacctcatcaaccacgtc
aatattcgcctgcaagcagagctggaagaaggcgagaatccagttccagcctttcggaat
gatggcacagaggatctggaggcccgggaatccttgaactccattgagagagaagccgaa
ggggacctggccaaccaccgacccagcgaggagcagcggaagagcgagagcaagaagggc
aagaaatactcgcgcctctcctgcctgcgccgtcgccgccatgtccagaaggtggacgag
agcgacctgagcgagggcttcgactccgactccagcccggattccaccaaagggagtgac
ggctcagagagcggctcagagaagagcgacgaggaggccgaggcggcttttgacgtggag
accgactcggacatgaacagccaggagtcacgctcagacctggaagacatggaggacgag
ccagacgccgaggggggcagccaagccaagggcatgaagaacggcgccccggaggctttg
gattctgcggaaggggatgttggcaggctggtggacttgaaaagccctggcgttgccaag
actgagcccctgctggagcctcctgtggccaacgggccaggcttgctgggcgccagtgat
gccagtatagccagcaacctccaggccatgtccacgcagctcttccagaccaagcgctgc
ttccgactggcccccactttcagcaacgtcctcctcaaaccaaactgtgagctgcctgcc
ccgaaagaggtggcggacagcaagccatgtgtcaatggggacgtggagaagtccaaaatg
actgagcaagatgatgtttctgagtcggaagagagcgtctctagcagtaaatcctgcagg
aacgagcgttctctccaggagaagctggagatcatcaccaacgaggggttgctgccgact
gtcaaagtatttctggactggctgagaaccaacactgatctcatcatcatgtgtgcacag
agttctcagagtttatggaacagactttctgtccttctgaacctgcttccttcagctgga
gaccttcaggactcagggctgttcctctgcaacgaggtgaagagcatgctgcctgggtgt
gagctgccagacttgcctgcttgcctgctgctcccagaggacatggccctccgcaacctt
cccccgctgaagaacgcgcacaagaggttcaacttcgagcaggacaggcctctcctcgca
gaagtggaggagtccgtggttcgcatctgttgcatccggagtttcggacacttcatcacc
cacctgcaaggcagcatcctgcagttcaacccggaggttgggatcttcatcagcatcgct
cagtcggagcaggacggcttgctccagcaggcccaggcccagttccgcatggccgctgag
gaagctcgccggaacaggctcatgagagacatggctcagcttcggctgcagctggaggtg
tcgcagctggaagggagcctccagcagcccaaagcacagtgtgtgatgtccccctacctg
gtccccgacacccaggctctctgccagcacctctgcaccatcaggcagctggctgccagt
ggaaggtttattgtgatcatcccacggacagtaattgatggcttagacttcctgaagaaa
gagaatgcgggagctcgtgacagcatccgatatctagaggcagaatttaaaaagggaaac
aggtacatccgctgccagaaagaagttgggaaaagctttgagaggcataaactgaagagg
caagatctagatgcttggaacctctataagatactggatagctgcaaacagctgacaacc
tctcaagggggcagcgaagatgactccagtgggatggtgaccatcctcacaggcttccag
ctggatgacccaagcaagctttctgcacccatgaagtctgcgatccaggcggcagccaac
gccagcgtcgagataaagaacgttctggaattctacaagcagtggaaggaaatgggttga
DBGET
integrated database retrieval system
