Podarcis muralis (common wall lizard): 114586298
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Entry
114586298 CDS
T06059
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03030
DNA replication
pmua03410
Base excision repair
pmua03420
Nucleotide excision repair
pmua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114586298 (RFC5)
03410 Base excision repair
114586298 (RFC5)
03420 Nucleotide excision repair
114586298 (RFC5)
03430 Mismatch repair
114586298 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmua03032
]
114586298 (RFC5)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114586298 (RFC5)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114586298 (RFC5)
DNA replication proteins [BR:
pmua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114586298 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
114586298 (RFC5)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114586298 (RFC5)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114586298 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
114586298 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
AAA_24
AAA_14
AAA_assoc_2
RuvB_N
DUF815
DEAD
ResIII
AAA_5
ATPase_2
AAA_19
AAA_7
TIP49
PhoH
AAA_30
TniB
DNAX_ATPase_lid
nSTAND3
Gp44_lid
Mg_chelatase
bpMoxR
AAA_3
NPHP3_N
Thioredoxin_6
AraA_central
Motif
Other DBs
NCBI-GeneID:
114586298
NCBI-ProteinID:
XP_028565413
LinkDB
All DBs
Position
16:complement(20149611..20162728)
Genome browser
AA seq
344 aa
AA seq
DB search
MERAAAAAAAAPAGRTVAGRNANLPWVEKYRPQTLSDLISHQDILSTIQKFISEDRLPHL
LLYGPPGTGKTSTILACAKQLYKDKAFSSMVLELNASDDRGIDIVRGPILNFASTRSIFK
KGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGP
LTPELMVPRLQHVIEEEGVDVSDDGMKALVTLSNGDMRRSLNILQSTSMAFGKVTEETVY
TCTGQPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALQDILTEIHLFVHRVDFPSS
VRIQLLIKMADVEHRLAAGTSEKIQLGALVGAFQVTRDLITAEA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcggcggcggcggcagcggcggcgcctgcggggaggacggtggccgggagg
aacgcgaacttgccctgggtagaaaaataccgacctcagacgctgagtgatctgatttct
catcaggacattctgagtaccattcagaagttcatcagtgaagatcgactgcctcatctc
cttctctatggacctccagggactggcaagacgtccaccattttggcctgtgctaaacag
ctttacaaagacaaagcgtttagctcaatggtcctcgagctcaatgcttcagacgacagg
ggaattgacattgtccgggggcccatcctgaactttgccagcacaaggagcatctttaag
aaaggctttaagctggttattctggatgaagcagatgccatgacacaggatgcccagaat
gcccttaggcgtgtgatagagaagttcaccgagaacaccaggttttgcctcatctgcaac
tacctctccaagatcatcccagccctgcagtccaggtgcaccagattccgctttgggccc
ctgactcctgagctcatggttcctcggctgcagcacgtcatcgaggaggagggagttgat
gtaagcgatgatgggatgaaagccctggtgacgctttccaacggcgatatgcgcaggtct
ctgaacatcttacagagcacatccatggcctttggaaaggtgaccgaggagacagtctac
acctgcactggacagccgctcaagtctgacattgccaacatcctcgattggatgctgaac
caagatttcaccaccgcctatcgcaatatcatggagctgaaaacattgaagggtttagct
cttcaggacatcctgacagaaatccacttgtttgtccaccgagttgacttcccatcatct
gtacgaatccagttgctgatcaagatggcggatgttgagcaccgcctggctgcagggaca
agcgagaagattcagctgggagcccttgttggtgccttccaggtcaccagagacctgatc
acagcagaggcttag
DBGET
integrated database retrieval system
