Podarcis muralis (common wall lizard): 114586461
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Entry
114586461 CDS
T06059
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03082
ATP-dependent chromatin remodeling
pmua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114586461 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114586461 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmua01009
]
114586461 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114586461 (SMARCB1)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114586461 (SMARCB1)
Protein phosphatases and associated proteins [BR:
pmua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114586461 (SMARCB1)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114586461 (SMARCB1)
SWI/SNF complex
114586461 (SMARCB1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114586461 (SMARCB1)
PBAF complex
114586461 (SMARCB1)
SWI/SNF complex
114586461 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
114586461
NCBI-ProteinID:
XP_028565782
UniProt:
A0A670JZS1
LinkDB
All DBs
Position
16:complement(28723129..28729476)
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFFMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctggag
gaggacggcgagttcttcatgataggctctgaggtgggcaactacctgcggatgttccgg
ggctccctgtacaagcgctacccgtcgctctggaggcgcctggccacggtggaggagcgc
aagaagatcgtcgcctcttcccacgaaaaccaacggagtcacagtcccagaagatatcac
ggttataccacactggccacaagtgtgactctcttgaaagcctctgaagtagaagagatc
ctggatggaaatgatgagaaatacaaggcagtctccatcagcactgagcctcccacctac
cttagagaacagaaggcaaaaaggaacagtcagtgggttccaacccttcccaacagctcc
caccaccttgacgctgtgccatgctcgaccaccattaacagaaatcggatgggcagagac
aagaagagaaccttccccctctgctttgatgaccacgacccagccgtgatccatgagaac
gcctcccagccagaggtgctggttcccatccgcctcgacatggaaattgacgggcagaaa
ctgagagacgcttttacatggaacatgaatgagaaactaatgaccccggaaatgttttcg
gagattctctgcgatgatctggatttgaatcccctgacctttgtcccggcgattgcgtca
gcaatacggcagcagattgaatcttaccctacagacagtattctggaggaccagtcagat
caacgcgtcattattaagctcaacatccatgtggggaacatctccctggtagaccagttt
gagtgggacatgtctgaaaaggagaactccccagaaaagtttgccctgaagctgtgctca
gaacttgggctgggcggcgagttcgtcaccaccatcgcttacagtatccgggggcagctg
agctggcatcagaagacgtacgctttcagtgagaaccccctgccaacggtggagattgcc
attcgtaacactggggatgccgaccagtggtgccctctacttgaaaccctgacggatgca
gagatggagaagaaaattcgagaccaagacagaaacacaaggcggatgagacgtttggct
aacacagctccagcttggtaa
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