Podarcis muralis (common wall lizard): 114587440
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Entry
114587440 CDS
T06059
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114587440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmua03009
]
114587440
Ribosome biogenesis [BR:
pmua03009
]
Eukaryotic type
Pre-60S particles
RNases
114587440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
114587440
NCBI-ProteinID:
XP_028567485
LinkDB
All DBs
Position
17:24073298..24092932
Genome browser
AA seq
1063 aa
AA seq
DB search
MLPSAGFFRSLPCPFDARGCRRPHCQYRHEALRRRLQGEPPVPQPRPLSGSSAQGLDKNI
QELEMINKAIQSLKTEVEEQKKLFCYDWVQDFKNNVIFATNHNKGNKSFSDEGDACNSPV
EVKNNTISISKESKRSSKYILDHSCPATDLEYDPLLNYSAGLGSSLKEVDKNDTCHSKHF
KVSHCRDLQASIKTFPGENRFRSPRKRSVSSSPIKLQESDDDMLIIDAPPMNVSKKPRIS
KTYKKWNREVNEMSFGANLETVQNSGTSDILKNLEGERSEVITVGLHSVNQSDGNKSKIK
ISAAESAYLADVKASALNVGSKLWTKYYPATKGNNVSPQMKFEMNKETLKEESLNVTSVK
ACNMTEEVSNHKTLLKNKTQTNLYSRGSTKDRVTALQESSKKDPIPFGKWSIQLHGKSNA
LPIKRSCVPVLSGDTFVEKTGENCTDKTMKMDAKENEIIVLDSSEEDDVEEDNELSESDD
TMEECRRIFNEFVEHEAQKERLAKQQALAAQTDVNSDLKTSMLPGQKRRIAHTAKFDVNT
TKEIIVPLKAPLPQRTCHSRILKAQQQATQITTAVKSGQAFVAATCGPKRTASVIPATQI
QSMGPIVCLNVFEVQPVGTSTGQVNVLLPGNALTSVPCRLSNYPVKKNTPKPIKASSRRR
PPVIVELGSKVPHDTRQRYVNFFFEEFLKDCATVNEAFDKALIEEKAIYDRCGSKNIYLN
IAVNKLKKLRDHSSVSADGQPSDNKCTTSTGFRKEEKNDFTGITLYKLLKEYALTDEQLK
ENGFPEPNPEKPGSAILCSGAIKAALSDSSRRICCRCGEIYTVTSSGRHVRKEECSYHSG
RVLRHKVPGGLETRYSCCEGVVGSPGCQVAKLHVHDGRKENIDGFVKTFIKPPPLDGNHG
VFALDCEMCYTTRGLELSRVTVVDPSLHVIYDTFVKPDNEIIDFNNRFSGVTAEDMKNTV
TSIRDVQAILLNLFSADTILIGHSLESDLFALKLFHNKIVDTSVVFPHRLGLPHKRALRN
LMADYLQRIIQDNVGGHDCSEDATACMELMLWKVKEDTKGRRY
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctcccctcggcgggtttcttcaggagcctcccttgccccttcgacgctcgcgggtgt
cggcggccccactgccagtacagacacgaggcccttcggcgccggcttcaaggggagccg
ccggtccctcagccgcggccgctgagtggctcttccgcgcagggtcttgataaaaatatc
caagaattagaaatgatcaacaaagcaattcagtcactcaagactgaagttgaagagcag
aagaaactattctgttacgactgggtgcaagatttcaaaaataatgtgatttttgcaacc
aatcacaacaaaggaaataaatctttctctgatgaaggtgatgcctgtaatagtcctgta
gaagtaaaaaataataccatttcaatctcaaaagaatctaaaaggtccagtaaatatatt
cttgaccatagctgtccagctactgatcttgaatatgacccattactcaattattctgca
ggtctcgggtcttctttgaaggaagtagataaaaatgacacatgccactctaaacatttt
aaagtctctcattgtagagatttacaagcatctataaaaacttttccaggtgaaaataga
ttcagatccccaaggaagagatcagtaagttcttcaccaataaaactccaggaatcagat
gatgatatgcttataatagatgccccaccaatgaatgtatcaaagaaaccaagaataagc
aagacctataaaaagtggaatagggaagtaaatgaaatgagttttggagctaatttagaa
actgttcagaactctggaacatcagatattttaaaaaatttagagggagaaagatcagaa
gtcatcactgttggcctgcatagtgtgaatcaaagtgatggaaataaaagtaaaataaaa
atttcagcagcagaaagtgcttatttagcagatgtcaaagcgagtgctttgaatgtagga
agcaaactttggacaaaatattaccctgctactaaaggcaataatgtatctcctcagatg
aagtttgaaatgaacaaagaaactttgaaggaggagtcactgaatgttacttctgttaaa
gcatgcaatatgactgaggaggttagtaatcataaaactttgctgaaaaacaaaactcag
actaacctatattctagaggcagtacaaaagatagagttacagcactacaagaaagctct
aaaaaagatccaataccttttgggaaatggagtattcagctacatgggaaaagcaatgca
ttgcctattaaacgaagctgtgttccagttttgagtggggatacatttgtcgaaaaaact
ggtgaaaattgtactgataaaactatgaaaatggatgccaaagaaaatgagataatagta
ttagactcttccgaagaagatgacgttgaagaggataatgaactttctgaatcagatgat
actatggaagaatgtcggagaattttcaatgagtttgttgaacatgaagcacaaaaggaa
agattagcaaagcagcaggcccttgcagcgcaaacagacgtaaactcagatttgaagaca
agtatgcttcctggacagaagagaagaattgcacacactgcaaaatttgatgttaatacc
actaaagaaataattgtgcctttaaaagcacctcttccacagcggacttgtcattccaga
atactgaaagcacagcaacaagcaacacaaataacaactgctgttaaaagtggtcaagct
tttgttgctgcaacttgcggcccaaagagaactgcatctgtaataccagctactcagatt
caaagcatgggccccatagtttgtttaaatgtgtttgaagttcagcctgttggaacaagc
actggccaagtgaatgtactacttcctggaaatgcattaacatcagtgccatgtagactt
tccaattatcctgtaaaaaaaaatactcccaagccaattaaggcatcaagtcggagaagg
cctcctgtgattgtggagctgggatccaaagtaccacatgacacaaggcaacgatatgtc
aattttttttttgaagaattcttgaaagattgtgcaacagtcaatgaagcttttgacaag
gcattgatagaagaaaaggcaatatatgaccgttgtggtagtaaaaatatatacttgaac
atagctgtgaacaagcttaaaaaattgagggatcatagcagtgtgtcagcagatggccag
ccctcagacaataaatgcactacttcaactggctttagaaaagaagaaaaaaatgatttt
acaggaattactctctataaacttctaaaagaatatgctttgactgatgaacagttgaag
gaaaatggcttccctgaaccaaatcctgagaaacctggcagtgctatactatgcagtggc
gccataaaagcagctttatctgactcttccagaagaatttgttgtcgatgcggagaaata
tatactgtaacttcatcaggaagacatgttcggaaagaagaatgcagctaccattctggt
agggtattaaggcataaagttccgggtggtttggaaacacgttacagttgttgcgaagga
gtggtaggatctcctggatgccaggttgcaaagctccatgttcatgatggcagaaaagaa
aatatagatggctttgtgaagactttcatcaaaccacctccacttgatggaaatcatggt
gtatttgcgttagattgtgaaatgtgttacacaacacgtggattggaactctccagagtg
acagtagttgatccttcacttcatgtcatctatgacacgtttgttaagcctgataatgaa
ataatagattttaataataggttttctggagtgacggcagaagacatgaagaatactgta
acatcaattcgggacgtgcaggcaatattgttaaacttgtttagtgcagacacaatttta
attggacatagtttagagagtgatttgtttgctcttaagctgtttcataataagattgtg
gatacatccgtagtttttcctcatcgtttaggcctgcctcataaaagagcacttagaaat
ctaatggctgattatctccaaagaattattcaagataatgttggtggtcatgactgtagt
gaagatgcaactgcttgtatggaacttatgctttggaaagtaaaagaggatactaaaggc
agaagatattaa
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