Podarcis muralis (common wall lizard): 114587604
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Entry
114587604 CDS
T06059
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03020
RNA polymerase
pmua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114587604 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
114587604 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114587604 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114587604 (POLR2B)
Enzymes [BR:
pmua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114587604 (POLR2B)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114587604 (POLR2B)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114587604 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
114587604
NCBI-ProteinID:
XP_028567918
UniProt:
A0A670K0J5
LinkDB
All DBs
Position
17:9071214..9091138
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggatgaagatatgcaatatgatgaggacgatgatgaaatcactccagat
ttgtggcaggaagcatgctggattgtgatcagttcctattttgatgaaaaaggcctggtc
cgacagcagctagattcgtttgatgaattcattcagatgtctgtgcagagaattgttgaa
gatgcaccaccaattgatctgcaagcagaagctcaacacgctacaggagaagtggaagag
ccaccacgctaccttttgaaatttgagcaaatttacctctccaagcctacacattgggaa
agagatggtgccccatcacctatgatgccaaatgaagccaggctgcgaaaccttacgtat
tctgctccattgtatgtggacataactaagacagttattaaggaaggagaggaccagttg
cagacgcagcatcagaaaactttcataggcaaaattcctatcatgctgcgatccacctac
tgcttattaaatggcttaacggaccgtgatctttgtgagctgaacgaatgccctcttgac
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaagatg
gctacaaataccgtatacgtgtttgcaaagaaagattccaaatacgcctacaccggagag
tgcaggtcttgcctggaaaattcttctcggcccacaagtacgatttgggtcagcatgctg
gccagaggcggccagggtgcaaagaagagtgccataggtcaacgtattgtggcaactttg
ccctacatcaagcaggaagtccctattattatcgttttccgcgcacttggctttgtgtct
gacagagatatactggaacatataatttatgactttgaagatcctgagatgatggaaatg
gttaagccttcattggatgaagcgttcgtcatccaggaacagaatgtcgcgctgaacttc
atcggctcaagaggtgcaaagccaggagtcaccaaggagaaaagaatcaagtatgcaaaa
gaagttttgcagaaagagatgcttccgcatgtcggtgtcagtgacttctgtgaaaccaaa
aaagcttactttcttgggtacatggttcataggcttctcctggcagctttagggagaagg
gagctggacgacagagatcactatggcaacaagcggcttgaccttgcaggccccctgctc
gctttcctgttcagaggaatgtttaagaacctgctgaaagaagttagaatatatgcacaa
aaatttattgacagagggaaagattttaacttggagctggccattaaaaccaggattata
tcggatggcttgaaatactcattagctacagggaactggggagaccagaagaaagctcac
caggccagagctggagtatctcaagtattgaaccgtctcacctttgcatctacgctttcc
cacttacgtcgtttgaattcccctattggcagagatggcaagctagcaaagcccagacaa
ctgcacaacaccttgtggggaatgatttgtcctgccgaaacaccagagggtcatgctgtg
gggcttgtgaagaacctagccctaatggcatatatctctgtggggtctcagccatcccca
attctggaatttttagaagaatggagtatggaaaacttagaagaaatctctccagcagct
attgcagacgctacaaagatctttgtgaacggctgttgggttgggatacacaaggacccg
gagcagctcatgaacacactgaggaaactgcggcgtcagatggacatcattgtgtcggag
gtgtccatgatcagggatatcagggagcgggaaattcgcatttacaccgatgctggcagg
atttgccgcccacttctaatcgtggaaaagcaaaagctgctgctgaagaagaggcatatc
gaccagctgaaagagcgtgaatataacaactacagctggcaggatctggtggccagtggt
gtagtagaatacattgacaccctagaagaggagactgtcatgctggccatgactccagat
gacttgcaggagaaaggcgttgcctactgttcaacctacacccactgtgagattcaccca
tccatgatcctaggagtctgcgcatcgattatcccatttcctgatcacaaccagtctcct
aggaacacataccagtctgctatggggaaacaggctatgggcgtttacattaccaacttc
catgtccgtatggatacccttgcccatgtcctgtattatcctcagaaaccccttgtgaca
acccgctctatggaatacctgcgattcagagagttgccggcaggcatcaactctattgtg
gccatagcttcatatactggatataaccaagaagactctgtcatcatgaaccgttcggca
gtcgataggggcttcttcagatctgtattctatcgttcttacaaagagcaagagtccaag
aaaggatttgaccaagaggaagtgtttgagaaacctactcgtgaaacgtgtcaagggatg
aggcacgccatctatgacaaactagacgacgatggcttgattgcacccggtgtgcgcgtc
tcgggagatgacgtcatcattggcaagacggtaactttgcccgagaacgaagacgagctg
gagagcaccaaccgccgttacaccaagagagactgcagcactttcttacgcactagtgaa
acgggcattgtggatcaggtcatggttaccttgaaccaggagggatacaagttctgtaaa
attagggtgcgctctgtgagaatcccacaaattggagataagtttgccagcagacatggg
cagaaaggtacctgtggtatccagtacagacaagaggacatgcctttcacctgcgaaggt
atcacccccgatataatcatcaatcctcatgccatcccttcacgtatgaccattggtcac
ttgattgaatgtctgcaagggaaggtatcagcaaataaaggagaaatcggtgacgccaca
cctttcaatgatgcagtcaacgtgcagaagatttctaacttgctgtctgactatggctac
catctaaggggaaatgaggttttgtacaatggcttcactggccgcaaaatcacatcgcag
atctttatcggccctacttactaccagcggttaaaacacatggtagatgacaaaatccat
tcccgtgcaagagggccaattcagatccttaataggcagcctatggaaggtcgatcccgt
gatggtggccttcgttttggagaaatggagagagactgtcagattgctcacggcgcagca
cagttcttacgagagagattgtttgaggcatcagacccgtatcaggttcacgtgtgcaac
ctgtgcggcttaatggcaatagcaaacaccaggacacacacctacgagtgcagaggctgc
cgtaataagacacagatttctctggttagaatgccgtacgcgtgcaaactccttttccag
gaactgatgtcgatgagtatcgcacctcgaatgatgagtgtgtag
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integrated database retrieval system
