KEGG   Podarcis muralis (common wall lizard): 114587615
Entry
114587615         CDS       T06059                                 
Symbol
FOCAD
Name
(RefSeq) LOW QUALITY PROTEIN: focadhesin
  KO
K27498  focadhesin
Organism
pmua  Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114587615 (FOCAD)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     114587615 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 114587615
NCBI-ProteinID: XP_028567937
LinkDB
Position
17:28437991..28568110
AA seq 1804 aa
MSEEIRKRLDFPNTLIQSQTVGHLVAAVLKENVSSNKISQSTNQTPALNLLWEKCCSDNV
VVRTSCCEALVTLVSQDHAELGYVLNGALNLIPSARNVHGLVKILVKLLQKQALKVNKSE
EEPLGEFYAIRNSPHPLITVLENRPDCWPALLPQLTAFFQQCPESAENSCVSVMRPFLRY
LYCEPCQLREHAELRMALLGVLLQPCGPRDKEKPCALERHLLQLLCDLVPHYQLKDLPQV
TEKLLFLEQLVRSLQRHPAFWKAQLRQLCLQLLCICEVCLQVTGECSSVICLLEENAELL
KEGFPSEMAVIGLGLLLLQAPASQQKPILKLAIKLLSCSETKMTLAVAPLLAMPALQILS
SSAVQGCSMEEDGGPTRQQLAINLLEIVQQEKLQEEKMQLASSEPFFPITSAYGSLHTTW
RLLGLLRETSSISDWLSSLKSVLPITTQVPAHVFLLLAYLLIQENGDCLRDVLAATTELA
KADSSQVPNLIPVLMFKLGTPLEPTLCREILYTLPALGVHKVCVAQILRALQVLGNTPEL
QAVALRLMTSLWEKQDRVYPELQRFMAMSDMASLSVGKDTQWEKVIAKAASIRDICKQRP
YQHGADMLAAISQVLNECTKPDQATPAVLVLQGLHALCQAEVVCIRSTWNALSPKLSCDT
RPLILKTLSELFSLVPSLTVNSNEYEKFKVQVVSFLWSHTQSKDPLVATSAYKSLSEFSS
EEHIILHLPEQARPELPQPEEVDINEEEEEEEEEKEVDLSVPGASYIKLLMLTPPPVLPA
FEEFAASLVKQEMASMPRGIYHSALRGGAVRSDQGKTVSGVPSFMLKMYERNKQPGLKPG
LAAGILLSYDLPIHVGKDGKPISRFLASRGRSFHQMLIALLHEVNIQPSEWHRSLLLPQS
WAGFMERSYHAILQGRQAELEMQLKHGKEGPEEVQYKQFTAWLWVRDMLTDVIKGASKES
PVVKGNCILALTGLAVAVAKHEKGLSTDSEEQFNTEVDFLLTNHWICMVIDTLLSIIDSH
YRPKGRVFPWFYQKSYSGENTASVIARSCAATALSLLVPVFIASYKEKVEEVLNLLVAML
PGKPNADESQAVQIHMGLALGMFVSRLCEEKVSDVSGKQMDLLLMKSLDALEGCCFDTSL
EYNTGCILGVGLVLSLMCRSSPSEGQADISASLHKLSKYLDDAEDQSRTFQEILAYAVAC
VCISAFSVKIIEATEAEEIMSKLQKLAETNQQTPGFALALGNIVHGLSASGHGKAEDLGN
RLFPAWMKIVLAEGGPTMQRLAAIHGLVAVVGSEGAMIQLKSESIQSSQFQSKLNEVIRI
LSQIISFSGVIGLQTNAAWLLGHLHLSTVSATHSRTSVPPDFSYLPEKSFLRAAIDFVIE
SGKKGPEQIRPHLVKAAMAPIALNGASYQYPPVNWASILSPLLRLNFGVEIQQLCLEVAV
TQAQSSQNAAMLLGMWVAPPLVCSLSAQAKRYLFTSLSVWMKHVAEDRLQAFTEVFMVQH
FEAKNQPQDLDLCWSILQGLSQAMKLPSSAQYSWSCLCRTAERIFELLPNGIRPSEVKMY
IHAAKCLSEMADTEIDRITQVSKNNLEKVTFVKVYIVSQGRFPLLRWNDVISIAVGCQQK
ETIVWMLLQSFYHARIVSHENTGVLKRMAWLLELMGYIKNISLKTTSIQNVAPKEAVSFL
LWIFAASVVAWADHSAPLLLGLSATWEGEARSALPANYLGKRPGDNLAARETLALFPGSL
QSLLAKEPWKEQTQKFIDWLFNLMESSDEVLSQSSRNLLKASLLALRSLPEFRKKAVWTK
AYGW
NT seq 5415 nt   +upstreamnt  +downstreamnt
atgtcagaagaaatcagaaagagacttgatttccctaacacccttatacagtcacagacg
gtgggccatcttgtcgctgctgtgctgaaagaaaatgtttcgtctaacaagataagccag
tccactaaccagacccctgccttaaacttgctctgggaaaagtgctgcagtgacaacgtg
gttgtccgaacctcgtgctgtgaggctctggtgacgctcgtctcgcaggatcacgcagaa
ctcggttatgttctcaacggagctctcaacctgattccttctgccaggaacgtccacggt
ttggtaaaaatccttgtcaaactgctgcagaagcaggccttgaaggtgaacaaaagcgaa
gaggagccgttgggggagttctatgcaatcaggaactctcctcatcccttgatcaccgtt
cttgagaacagacctgactgctggccagcgctcctgccacagcttacagcctttttccag
cagtgtccagagagcgcagagaattcatgtgtctctgtaatgagacctttcctgcgatac
ctgtactgtgagccttgccagctgagggaacatgcggaattgcgaatggctctgcttgga
gttttgcttcagccgtgtgggcctcgggacaaggagaaaccttgtgccctcgagcgccat
ctccttcagctgctttgtgacttggttccacattatcagctaaaagacctgccgcaggtc
acagaaaagctgctgtttttggagcagctggtccgaagtctgcagcgccaccctgctttt
tggaaagcccagttgcgccagctctgcctgcaacttttatgcatctgtgaggtttgcttg
caggtcactggggagtgttcgtccgtgatttgcttactggaagaaaatgctgagctgctg
aaagagggctttccatcggagatggccgtaattggattaggtttgctactgcttcaggct
ccagccagtcagcaaaaaccaatcttaaagctagccatcaagctcctttcctgctctgaa
accaagatgactcttgcagttgcccctctcctggcgatgcccgctctgcagatcttgtct
tccagcgccgtgcagggctgctcgatggaggaggacggtggccccactcggcagcagctg
gccattaatcttttagaaatcgtgcagcaggaaaaattgcaggaagagaaaatgcaactg
gcctcttccgaacctttctttcccatcaccagtgcttatggttcattgcatacgacctgg
aggctcctggggctcctgagagagacgtcttccatttccgactggctatcttctcttaaa
tccgtgctgcccattacaacacaagtccctgcccacgtgttccttctgctggcttacctc
ctcattcaagaaaacggagattgccttcgtgacgtattagctgccactacagaactcgcc
aaagcagattcgtcccaggtgccaaatctgattcccgtcctgatgtttaagttggggacg
ccactggagcccacgctgtgccgggaaatcttgtatactttgcctgctttgggtgttcat
aaggtctgcgtggctcagattttacgtgccctacaggtgttgggaaacacgccagagctt
caagctgttgcattacgcctgatgacatctttatgggagaagcaggatcgtgtttaccca
gaactgcagcgattcatggcgatgtcggatatggcttccttatccgttggaaaagatact
cagtgggagaaggtgattgccaaagctgcttctatcagagacatatgcaagcaaaggcct
taccaacacggagcggatatgttggctgcaatttcccaggtgctgaatgaatgtacgaag
cctgaccaagccactcctgctgtcctcgtgctgcaaggtctccatgccctttgtcaggca
gaggttgtctgcattcgctctacatggaacgccctgtcgccaaagctgagctgtgacacc
cggccactcattttgaaaaccctgagcgaactgttctctcttgtgccttccttaacggtg
aactcaaatgagtatgagaaattcaaagttcaagtcgtcagcttcctgtggagccacaca
cagagcaaggatccacttgtagccacatcggcatacaaatctctctctgaatttagctca
gaagaacacatcattctccatcttcccgaacaggcaagaccagaattgccccaaccagaa
gaggtggatatcaatgaagaggaggaagaggaagaggaagagaaagaggtggatctctct
gttcctggtgcctcctatatcaaattgttgatgctcactcctcctccagttctaccagcg
tttgaggagttcgcagcatcgctcgtgaaacaggagatggccagcatgcctcgtggaata
taccattctgcactgagaggcggtgctgtccggtcggaccaagggaagacggtgtcgggc
gtgccaagctttatgctgaaaatgtacgagagaaacaagcagcctggactgaagcctggc
ctcgcagccggcatattgctgagttacgatctcccaatccacgtggggaaggatggaaag
cctatcagccgatttctagccagtaggggacgcagtttccaccagatgttgattgctctc
ctccacgaggtcaacattcagccttctgagtggcatcgctccctgctacttccccagtcc
tgggccggatttatggagagaagctatcatgcaattctacaaggaaggcaggccgagctg
gagatgcagttaaaacacggcaaggagggacccgaagaagtgcagtacaagcaatttaca
gcctggctctgggtcagagatatgctgacggatgtgatcaagggcgcttccaaggaaagt
ccagtggtcaaggggaattgtattctagccttaacaggccttgcagttgcggtagccaag
cacgagaaagggctttctacagacagcgaagaacaattcaataccgaggtggactttctt
ctgacaaaccattggatctgcatggtgatagacacccttcttagcatcatcgacagtcac
tatcgccccaagggccgagtcttcccgtggttctatcagaaatcctactctggtgaaaac
actgctagtgttatcgcccgttcctgtgcagcgacggctttgtctctcttggtgccggtt
tttattgcatcctacaaggaaaaggttgaggaagtcctgaatttgctggttgccatgtta
cctgggaaaccaaatgcagacgagtctcaggctgttcaaattcacatgggccttgctttg
gggatgtttgtctcgcgattatgtgaagagaaagtcagtgatgtctctggaaaacaaatg
gatctgctgttgatgaagtccttggatgccctagagggctgctgctttgacacaagcctg
gagtacaacaccggatgcatcttgggtgtcggccttgttctgtcactgatgtgtcgcagc
agcccatcggaaggccaggctgacatctctgcctcccttcacaaactgagcaaatatttg
gatgatgcagaagaccaaagcagaacatttcaggagattcttgcctatgcggtcgcctgt
gtctgcatttctgcctttagtgttaagatcatcgaggccacggaggcggaggagatcatg
agcaagctgcagaaattagcagaaactaatcagcagacgcctgggtttgccttagcattg
gggaacattgttcatggattgtctgcaagcggacatggcaaagcggaagacctcggcaac
aggctgtttcctgcatggatgaaaattgtccttgcagagggaggtcctacaatgcaaagg
cttgcagcgatccatgggctggttgctgtggtgggttctgaaggagccatgatacagctg
aaatctgagtccatccagtcttctcagtttcagagcaaacttaatgaggtcatcagaatc
ctgagtcagataatcagcttttctggggtgatcggccttcagacaaacgcagcatggctg
ttgggacatttgcatctctccactgtgtctgcgacccacagtcgaacatctgttccgcca
gactttagctacctgcctgagaaaagtttcctgagggcagccatcgactttgttatcgaa
agtgggaagaaaggccctgaacaaattcggcctcacttggtcaaagcagctatggctccc
atagcattgaatggagcaagctaccagtacccacctgtgaactgggcatcgattctttcc
cctctcctgagactaaattttggagtagagatacagcagctgtgccttgaagtagctgtg
acccaggcccagtcgtcacagaacgctgccatgcttttgggcatgtgggtagccccacct
ctcgtctgcagtctaagcgcacaagccaagagataccttttcacgtccttatctgtgtgg
atgaaacatgtagcggaagacagattgcaggctttcacagaagtcttcatggttcagcat
tttgaagcaaaaaaccagccgcaagatctggatctttgctggagtattttgcaaggcctc
agccaagccatgaaactgcctagctctgcccagtacagctggagctgcctttgcaggact
gcggagaggatatttgaacttctgccaaatgggattcggccaagtgaagtgaagatgtat
atacacgcagcaaaatgtctctcggaaatggcagacacagaaattgaccgaattacccaa
gtttcaaagaacaatttggaaaaggtcacatttgtcaaagtttatatagtttcccaaggc
agatttcctttgctgagatggaacgacgtgattagcattgccgttggatgccagcagaaa
gaaaccattgtgtggatgttgctgcagagcttctaccatgcaagaattgtgagccacgaa
aacacaggagtcttaaagagaatggcgtggctcttggaactaatgggatatattaaaaac
atttccttgaagacaacatccatacaaaatgtggctccaaaagaggcggtcagcttcctg
ttgtggatctttgctgcctccgtggtggcctgggctgaccactctgcgccgctgctgctt
ggcctcagcgccacctgggaaggggaagcaagatcagcgttgcctgcaaattatttgggc
aagcgcccgggagataatctggctgcgcgggagaccctcgctcttttcccaggcagcctg
cagagtctgttggctaaagagccttggaaggaacaaacacaaaagttcattgactggcta
tttaacctgatggagagctcagacgaagtgctatcccagtcttctaggaatcttttgaaa
gcatctctgctggctctgcggtctctcccagagttcaggaagaaggcagtatggacaaag
gcttatggctggtag

DBGET integrated database retrieval system