Podarcis muralis (common wall lizard): 114587615
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Entry
114587615 CDS
T06059
Symbol
FOCAD
Name
(RefSeq) LOW QUALITY PROTEIN: focadhesin
KO
K27498
focadhesin
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114587615 (FOCAD)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114587615 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
114587615
NCBI-ProteinID:
XP_028567937
LinkDB
All DBs
Position
17:28437991..28568110
Genome browser
AA seq
1804 aa
AA seq
DB search
MSEEIRKRLDFPNTLIQSQTVGHLVAAVLKENVSSNKISQSTNQTPALNLLWEKCCSDNV
VVRTSCCEALVTLVSQDHAELGYVLNGALNLIPSARNVHGLVKILVKLLQKQALKVNKSE
EEPLGEFYAIRNSPHPLITVLENRPDCWPALLPQLTAFFQQCPESAENSCVSVMRPFLRY
LYCEPCQLREHAELRMALLGVLLQPCGPRDKEKPCALERHLLQLLCDLVPHYQLKDLPQV
TEKLLFLEQLVRSLQRHPAFWKAQLRQLCLQLLCICEVCLQVTGECSSVICLLEENAELL
KEGFPSEMAVIGLGLLLLQAPASQQKPILKLAIKLLSCSETKMTLAVAPLLAMPALQILS
SSAVQGCSMEEDGGPTRQQLAINLLEIVQQEKLQEEKMQLASSEPFFPITSAYGSLHTTW
RLLGLLRETSSISDWLSSLKSVLPITTQVPAHVFLLLAYLLIQENGDCLRDVLAATTELA
KADSSQVPNLIPVLMFKLGTPLEPTLCREILYTLPALGVHKVCVAQILRALQVLGNTPEL
QAVALRLMTSLWEKQDRVYPELQRFMAMSDMASLSVGKDTQWEKVIAKAASIRDICKQRP
YQHGADMLAAISQVLNECTKPDQATPAVLVLQGLHALCQAEVVCIRSTWNALSPKLSCDT
RPLILKTLSELFSLVPSLTVNSNEYEKFKVQVVSFLWSHTQSKDPLVATSAYKSLSEFSS
EEHIILHLPEQARPELPQPEEVDINEEEEEEEEEKEVDLSVPGASYIKLLMLTPPPVLPA
FEEFAASLVKQEMASMPRGIYHSALRGGAVRSDQGKTVSGVPSFMLKMYERNKQPGLKPG
LAAGILLSYDLPIHVGKDGKPISRFLASRGRSFHQMLIALLHEVNIQPSEWHRSLLLPQS
WAGFMERSYHAILQGRQAELEMQLKHGKEGPEEVQYKQFTAWLWVRDMLTDVIKGASKES
PVVKGNCILALTGLAVAVAKHEKGLSTDSEEQFNTEVDFLLTNHWICMVIDTLLSIIDSH
YRPKGRVFPWFYQKSYSGENTASVIARSCAATALSLLVPVFIASYKEKVEEVLNLLVAML
PGKPNADESQAVQIHMGLALGMFVSRLCEEKVSDVSGKQMDLLLMKSLDALEGCCFDTSL
EYNTGCILGVGLVLSLMCRSSPSEGQADISASLHKLSKYLDDAEDQSRTFQEILAYAVAC
VCISAFSVKIIEATEAEEIMSKLQKLAETNQQTPGFALALGNIVHGLSASGHGKAEDLGN
RLFPAWMKIVLAEGGPTMQRLAAIHGLVAVVGSEGAMIQLKSESIQSSQFQSKLNEVIRI
LSQIISFSGVIGLQTNAAWLLGHLHLSTVSATHSRTSVPPDFSYLPEKSFLRAAIDFVIE
SGKKGPEQIRPHLVKAAMAPIALNGASYQYPPVNWASILSPLLRLNFGVEIQQLCLEVAV
TQAQSSQNAAMLLGMWVAPPLVCSLSAQAKRYLFTSLSVWMKHVAEDRLQAFTEVFMVQH
FEAKNQPQDLDLCWSILQGLSQAMKLPSSAQYSWSCLCRTAERIFELLPNGIRPSEVKMY
IHAAKCLSEMADTEIDRITQVSKNNLEKVTFVKVYIVSQGRFPLLRWNDVISIAVGCQQK
ETIVWMLLQSFYHARIVSHENTGVLKRMAWLLELMGYIKNISLKTTSIQNVAPKEAVSFL
LWIFAASVVAWADHSAPLLLGLSATWEGEARSALPANYLGKRPGDNLAARETLALFPGSL
QSLLAKEPWKEQTQKFIDWLFNLMESSDEVLSQSSRNLLKASLLALRSLPEFRKKAVWTK
AYGW
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaatcagaaagagacttgatttccctaacacccttatacagtcacagacg
gtgggccatcttgtcgctgctgtgctgaaagaaaatgtttcgtctaacaagataagccag
tccactaaccagacccctgccttaaacttgctctgggaaaagtgctgcagtgacaacgtg
gttgtccgaacctcgtgctgtgaggctctggtgacgctcgtctcgcaggatcacgcagaa
ctcggttatgttctcaacggagctctcaacctgattccttctgccaggaacgtccacggt
ttggtaaaaatccttgtcaaactgctgcagaagcaggccttgaaggtgaacaaaagcgaa
gaggagccgttgggggagttctatgcaatcaggaactctcctcatcccttgatcaccgtt
cttgagaacagacctgactgctggccagcgctcctgccacagcttacagcctttttccag
cagtgtccagagagcgcagagaattcatgtgtctctgtaatgagacctttcctgcgatac
ctgtactgtgagccttgccagctgagggaacatgcggaattgcgaatggctctgcttgga
gttttgcttcagccgtgtgggcctcgggacaaggagaaaccttgtgccctcgagcgccat
ctccttcagctgctttgtgacttggttccacattatcagctaaaagacctgccgcaggtc
acagaaaagctgctgtttttggagcagctggtccgaagtctgcagcgccaccctgctttt
tggaaagcccagttgcgccagctctgcctgcaacttttatgcatctgtgaggtttgcttg
caggtcactggggagtgttcgtccgtgatttgcttactggaagaaaatgctgagctgctg
aaagagggctttccatcggagatggccgtaattggattaggtttgctactgcttcaggct
ccagccagtcagcaaaaaccaatcttaaagctagccatcaagctcctttcctgctctgaa
accaagatgactcttgcagttgcccctctcctggcgatgcccgctctgcagatcttgtct
tccagcgccgtgcagggctgctcgatggaggaggacggtggccccactcggcagcagctg
gccattaatcttttagaaatcgtgcagcaggaaaaattgcaggaagagaaaatgcaactg
gcctcttccgaacctttctttcccatcaccagtgcttatggttcattgcatacgacctgg
aggctcctggggctcctgagagagacgtcttccatttccgactggctatcttctcttaaa
tccgtgctgcccattacaacacaagtccctgcccacgtgttccttctgctggcttacctc
ctcattcaagaaaacggagattgccttcgtgacgtattagctgccactacagaactcgcc
aaagcagattcgtcccaggtgccaaatctgattcccgtcctgatgtttaagttggggacg
ccactggagcccacgctgtgccgggaaatcttgtatactttgcctgctttgggtgttcat
aaggtctgcgtggctcagattttacgtgccctacaggtgttgggaaacacgccagagctt
caagctgttgcattacgcctgatgacatctttatgggagaagcaggatcgtgtttaccca
gaactgcagcgattcatggcgatgtcggatatggcttccttatccgttggaaaagatact
cagtgggagaaggtgattgccaaagctgcttctatcagagacatatgcaagcaaaggcct
taccaacacggagcggatatgttggctgcaatttcccaggtgctgaatgaatgtacgaag
cctgaccaagccactcctgctgtcctcgtgctgcaaggtctccatgccctttgtcaggca
gaggttgtctgcattcgctctacatggaacgccctgtcgccaaagctgagctgtgacacc
cggccactcattttgaaaaccctgagcgaactgttctctcttgtgccttccttaacggtg
aactcaaatgagtatgagaaattcaaagttcaagtcgtcagcttcctgtggagccacaca
cagagcaaggatccacttgtagccacatcggcatacaaatctctctctgaatttagctca
gaagaacacatcattctccatcttcccgaacaggcaagaccagaattgccccaaccagaa
gaggtggatatcaatgaagaggaggaagaggaagaggaagagaaagaggtggatctctct
gttcctggtgcctcctatatcaaattgttgatgctcactcctcctccagttctaccagcg
tttgaggagttcgcagcatcgctcgtgaaacaggagatggccagcatgcctcgtggaata
taccattctgcactgagaggcggtgctgtccggtcggaccaagggaagacggtgtcgggc
gtgccaagctttatgctgaaaatgtacgagagaaacaagcagcctggactgaagcctggc
ctcgcagccggcatattgctgagttacgatctcccaatccacgtggggaaggatggaaag
cctatcagccgatttctagccagtaggggacgcagtttccaccagatgttgattgctctc
ctccacgaggtcaacattcagccttctgagtggcatcgctccctgctacttccccagtcc
tgggccggatttatggagagaagctatcatgcaattctacaaggaaggcaggccgagctg
gagatgcagttaaaacacggcaaggagggacccgaagaagtgcagtacaagcaatttaca
gcctggctctgggtcagagatatgctgacggatgtgatcaagggcgcttccaaggaaagt
ccagtggtcaaggggaattgtattctagccttaacaggccttgcagttgcggtagccaag
cacgagaaagggctttctacagacagcgaagaacaattcaataccgaggtggactttctt
ctgacaaaccattggatctgcatggtgatagacacccttcttagcatcatcgacagtcac
tatcgccccaagggccgagtcttcccgtggttctatcagaaatcctactctggtgaaaac
actgctagtgttatcgcccgttcctgtgcagcgacggctttgtctctcttggtgccggtt
tttattgcatcctacaaggaaaaggttgaggaagtcctgaatttgctggttgccatgtta
cctgggaaaccaaatgcagacgagtctcaggctgttcaaattcacatgggccttgctttg
gggatgtttgtctcgcgattatgtgaagagaaagtcagtgatgtctctggaaaacaaatg
gatctgctgttgatgaagtccttggatgccctagagggctgctgctttgacacaagcctg
gagtacaacaccggatgcatcttgggtgtcggccttgttctgtcactgatgtgtcgcagc
agcccatcggaaggccaggctgacatctctgcctcccttcacaaactgagcaaatatttg
gatgatgcagaagaccaaagcagaacatttcaggagattcttgcctatgcggtcgcctgt
gtctgcatttctgcctttagtgttaagatcatcgaggccacggaggcggaggagatcatg
agcaagctgcagaaattagcagaaactaatcagcagacgcctgggtttgccttagcattg
gggaacattgttcatggattgtctgcaagcggacatggcaaagcggaagacctcggcaac
aggctgtttcctgcatggatgaaaattgtccttgcagagggaggtcctacaatgcaaagg
cttgcagcgatccatgggctggttgctgtggtgggttctgaaggagccatgatacagctg
aaatctgagtccatccagtcttctcagtttcagagcaaacttaatgaggtcatcagaatc
ctgagtcagataatcagcttttctggggtgatcggccttcagacaaacgcagcatggctg
ttgggacatttgcatctctccactgtgtctgcgacccacagtcgaacatctgttccgcca
gactttagctacctgcctgagaaaagtttcctgagggcagccatcgactttgttatcgaa
agtgggaagaaaggccctgaacaaattcggcctcacttggtcaaagcagctatggctccc
atagcattgaatggagcaagctaccagtacccacctgtgaactgggcatcgattctttcc
cctctcctgagactaaattttggagtagagatacagcagctgtgccttgaagtagctgtg
acccaggcccagtcgtcacagaacgctgccatgcttttgggcatgtgggtagccccacct
ctcgtctgcagtctaagcgcacaagccaagagataccttttcacgtccttatctgtgtgg
atgaaacatgtagcggaagacagattgcaggctttcacagaagtcttcatggttcagcat
tttgaagcaaaaaaccagccgcaagatctggatctttgctggagtattttgcaaggcctc
agccaagccatgaaactgcctagctctgcccagtacagctggagctgcctttgcaggact
gcggagaggatatttgaacttctgccaaatgggattcggccaagtgaagtgaagatgtat
atacacgcagcaaaatgtctctcggaaatggcagacacagaaattgaccgaattacccaa
gtttcaaagaacaatttggaaaaggtcacatttgtcaaagtttatatagtttcccaaggc
agatttcctttgctgagatggaacgacgtgattagcattgccgttggatgccagcagaaa
gaaaccattgtgtggatgttgctgcagagcttctaccatgcaagaattgtgagccacgaa
aacacaggagtcttaaagagaatggcgtggctcttggaactaatgggatatattaaaaac
atttccttgaagacaacatccatacaaaatgtggctccaaaagaggcggtcagcttcctg
ttgtggatctttgctgcctccgtggtggcctgggctgaccactctgcgccgctgctgctt
ggcctcagcgccacctgggaaggggaagcaagatcagcgttgcctgcaaattatttgggc
aagcgcccgggagataatctggctgcgcgggagaccctcgctcttttcccaggcagcctg
cagagtctgttggctaaagagccttggaaggaacaaacacaaaagttcattgactggcta
tttaacctgatggagagctcagacgaagtgctatcccagtcttctaggaatcttttgaaa
gcatctctgctggctctgcggtctctcccagagttcaggaagaaggcagtatggacaaag
gcttatggctggtag
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integrated database retrieval system