Podarcis muralis (common wall lizard): 114587921
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Entry
114587921 CDS
T06059
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114587921 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmua03041
]
114587921 (DDX5)
03009 Ribosome biogenesis [BR:
pmua03009
]
114587921 (DDX5)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114587921 (DDX5)
Spliceosome [BR:
pmua03041
]
Complex A
U1 snRNP components
U1 related factors
114587921 (DDX5)
Complex B
114587921 (DDX5)
Ribosome biogenesis [BR:
pmua03009
]
Eukaryotic type
Pre-60S particles
Helicases
114587921 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
114587921
NCBI-ProteinID:
XP_028568632
LinkDB
All DBs
Position
2:complement(20703256..20710033)
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AA seq
600 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VARRPMQEIEQYRAGKEITVKGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEHVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGYGAQGFGNGTAFGNNFG
GAGMQGGFRAGTPAYQNGYDQQYGNNMANMHGAMNQQQYAYPATGTTPMIGYPMPANYTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggaccgcgggtttggtggccctcgttttggaggaagt
cgagggggatctttaggtgggaagaagtttgggaaccctggagaaaagcttacaaagaaa
aaatggaatctagatgagcttcctaaatttgagaagaacttctaccaggaacatcctgat
gttgccagacgtcctatgcaagagattgaacaatacagagcaggaaaagagatcacagtt
aaaggccacaattgtccaaaaccagttatgaatttctatgaagctaactttccagcaaac
gttatggaagttattcagagacagaactttacggaaccaactgctattcaggcacaaggt
tggcctgttgccttgagtggactggatatggttggcgtagcacaaactggatcggggaaa
acactgtcttatttgttgcctgccatagtacacataaaccatcagccattcctagaacga
ggagatgggcccatttgtttggtgctggcaccaactcgagagctggctcagcaggtgcag
caagtggctgcagaatatggcagagcctgccgtttgaagtctacttgtatttatggaggt
gctcctaagggaccacaaatacgtgacctggaaagaggtgtggagatttgcattgcaaca
cctggtaggctcatagacttcttggaagctggaaaaaccaatctccggcgatgcacttac
cttgttcttgatgaagctgacagaatgcttgatatgggatttgagcctcagattcgaaaa
attgtagaccagattagacctgacaggcagactctgatgtggagtgcaacatggcccaaa
gaagttaggcagcttgcagaagatttcttaaaagaacatgtacacatcaacattggcgca
ttggaactaagtgcaaaccacaatattctgcagatagtggatgtatgtcatgatgtagag
aaagatgataagcttattcggttgatggaagaaataatgagcgagaaagaaaacaaaact
attgtctttgtggagaccaaaagaagatgtgatgatcttactagaaaaatgaggagagat
gggtggccagcaatgggtatccatggtgacaaaagtcaacaggagcgcgactgggttcta
aatgaattcaaacacggaaaggctcctatcctgattgctacagatgttgcctccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttacacctaacaatataaagcaagtaagcgacctcatctctgtacttcgtgaagcaaat
caggcaatcaacccaaaattgctccagttggttgaagacagaggttcaggtcgttccaga
ggtgaccgccgtgacagatactctgcgggcaaaagaggtggatttggttttagagagagg
gaaaactttgaaagaacctatggtgcagtgggcaagagagacttcggtgcaaaagctcag
aatggtggctatggtgctcaaggttttggtaatggaactgcctttggaaacaactttgga
ggagctggcatgcagggtggatttagggctggcacaccagcttatcagaatggttatgat
cagcagtatgggaataacatggcaaacatgcacggtgcaatgaaccagcagcagtatgca
taccctgcaactggcaccacgccaatgataggttatccaatgccagcaaactatacccaa
taa
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