Podarcis muralis (common wall lizard): 114588179
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Entry
114588179 CDS
T06059
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmua01009
]
114588179 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114588179 (HDAC6)
04131 Membrane trafficking [BR:
pmua04131
]
114588179 (HDAC6)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114588179 (HDAC6)
Enzymes [BR:
pmua01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114588179 (HDAC6)
Protein phosphatases and associated proteins [BR:
pmua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114588179 (HDAC6)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114588179 (HDAC6)
Membrane trafficking [BR:
pmua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114588179 (HDAC6)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114588179 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114588179
NCBI-ProteinID:
XP_028568999
LinkDB
All DBs
Position
17:37749460..37793462
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AA seq
948 aa
AA seq
DB search
MASDVGDAQIIEPPSVSPLETRAPMRKTKKKGGLPDAKRKGRAKRLNKDAEDLLSSMQRL
DLTTECATPVGTGLVWDERMTQFHCTWDESFPECPERLVAIRDKLLQCGLLERCIPVEAQ
EISEEEILLVHSPEYLALMKSTETMSEAELRSLSDTYDSVYLHPNSYRCACLAAGSVLQL
VEKVLAGKLRNGLALVRPPGHHAQCDKMDGYCMFNNVGIAAQYARQKLGVERVLIVDWDV
HHGQGTQYLFEDNPSILYFSIHRYEGGSFWPHLLDSDSHAVGRGRGEGYNINLPWNQIGM
RDADYLSAFLHILLPVALEFQPQLVLVAAGFDSVIGDPKGEMSATPACFAHLTHLLMPLS
GGKLVLSLEGGYNLQSLAEGTCAVLKALLGDPCPLLESPLTPCASALCSISQTLAVHSKY
WKNLRRTSTDVPRENGGEAGTVFPPGHPLPAAEILSKSAAELMLPRPPSCTGLVYDEKMT
EHYNMWDSQHPELPQRVSRIFQRHGELRLTERCCRLPARLASEEELRMCHSLAYVETVKS
TAAMKPRDLHRQGDQYNSIFICASSYECARLAAGSAFSAVEAVLSGQVQNAVAIVRPPGH
HAESDTACGFCFFNSVALAARYAQRLAGRPMRVMILDWDVHHGNGTQHMFEDDPSVLYVS
LHRYDNGTFFPTSEDADYDRVGLGPGEGFTLNVPWNCPRMGDPEYLAAFHQIVMPVSYEF
NPELVLVSAGFDAARGDPLGGCLVTPECYAHMTHLLLGLAGGKVAVVLEGGYNLESISES
MTMCTRSLLGDPLPPLGRLKAPHPSALQSLANAAAVHRKYWASLRLEVPAPLWEKRRTRA
GKGTPIPDEIPPEAPQKLLQSPSAQPVNTLNDAVLALSSLQLEDRLVEEAETASSSLSPD
SSPVGEEVGASPGEAEPAVDAQKEGMSTGSSTGGAESPGKEAEVGAVA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatgttggagatgcccaaataatagaacccccttctgtgtcgcctttggag
acccgcgcacccatgaggaagactaagaagaagggagggttgccagacgccaaacggaaa
gggcgggccaagcggttgaacaaagatgcggaggatctgctctcaagcatgcagcgattg
gatctcaccacagaatgtgctacaccagtggggactggcctggtttgggatgaacggatg
acacagtttcactgcacatgggatgaaagtttcccagagtgtccagaacggctggtggcc
atacgagataaattgctgcaatgtggactgctggaacgttgcatcccagttgaggctcaa
gaaatttctgaggaagaaatcctcttggttcacagccccgagtacttggccctgatgaaa
tctactgaaaccatgagtgaggctgagctgagatctctgtcggacacgtatgattctgtc
tatctgcacccaaattcctaccgctgtgcctgccttgctgctggttctgtcctgcaactt
gtggagaaggtgctggctgggaagctgcgtaacggcctggctctggtcaggccacctgga
caccacgctcaatgtgacaagatggatggctactgcatgttcaacaatgtaggcatcgca
gcccaatatgcgcggcaaaaattgggagtggagcgggtgcttattgttgactgggatgtg
catcatggacaaggcacccagtacctctttgaggacaatcccagcatcctctatttctcc
atccatcgctatgaagggggcagcttctggccccaccttttagactctgacagtcatgct
gtgggcagaggtcggggagagggctacaacatcaacctgccctggaatcagatagggatg
cgggatgctgactacctctctgcctttttgcatatcctgctgcctgtggccttggagttt
cagccccagttggtcctggttgctgctggttttgactcagtaatcggtgaccccaagggg
gagatgtcagccacgccagcatgttttgctcacctgacacatctgctgatgccgctgtct
ggaggcaagctggttctgtctctggagggtggctacaatctccagtccctggcagaggga
acctgcgcagtcctcaaggctcttttaggagacccctgtcctctgctggagtctcctctt
accccgtgtgccagtgccctctgctccatttcccagacccttgcagttcacagcaagtac
tggaagaacctccggagaaccagtactgatgtgcctcgggagaatggaggagaggcgggc
acagtttttccaccaggccaccccttgccagcagccgagatcctgtccaagtcagcggct
gaactgatgctaccccggcccccttcctgcactgggctggtctatgatgagaagatgacg
gagcattacaacatgtgggacagtcagcatccagagctgcctcagagagtctcccggatc
ttccagcgccacggggagcttcgcctgacggaaaggtgctgccggctcccggcccggctc
gcctctgaagaggagctgcggatgtgccacagcctggcctatgtggagacggtgaagtca
acagcggccatgaagccccgtgacctgcatcgccagggcgaccagtacaattccatcttc
atctgcgccagctcctatgagtgcgctcggctggcagctggttccgcgttcagtgcagta
gaggccgtgctctctgggcaggtgcaaaacgctgtggccattgtccggccccctgggcac
catgctgaatcagacaccgcctgtggcttctgcttcttcaactctgtggccttggcagca
cgatatgcacagcgccttgctggacgtcctatgagggtgatgatactagactgggatgtt
caccatggcaacgggacacagcacatgtttgaagatgatcccagtgtcctgtacgtctcc
ctccaccgctatgacaatggaactttcttccccacctccgaggatgcagactatgatcgt
gtgggcctggggcctggggagggcttcacccttaacgtgccttggaactgtccccgcatg
ggggaccctgagtacctggctgccttccatcagatagtcatgcctgtcagctatgagttc
aatccagagctggtcctggtttctgctggctttgacgctgctcgaggggacccgctgggc
ggatgcctcgtgactccagaatgctacgcacacatgacccatctgctcctgggtctggcc
ggaggcaaggtggcagttgtcttggagggcggctacaacctagaatcgatctcggaatcc
atgaccatgtgcacacgcagcctcctgggggatcctctgccccctctgggacgcctcaag
gccccccaccccagtgccctgcaatctttggccaatgcagctgctgtgcaccgcaagtac
tgggcaagcctgcgactggaagtgcctgctcctctgtgggagaagcgcaggactcgagct
gggaaaggaactcccattccagatgaaatccccccggaggccccccagaagctgcttcaa
agccccagcgctcaacctgtgaataccttgaatgatgctgttttggctctgagctccctc
cagctggaagaccgccttgtggaggaggcagagacagcttccagttccctctcacccgat
tccagtccggtgggcgaagaggttggggcctcccctggagaagctgagccagcggtggat
gcccagaaggaaggcatgtcgacagggagctccacgggtggagcggagtctcctggcaaa
gaggcagaggtaggtgcagtggcgtag
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