Podarcis muralis (common wall lizard): 114588906
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Entry
114588906 CDS
T06059
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04010
MAPK signaling pathway
pmua04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114588906 (CACNA1B)
04020 Calcium signaling pathway
114588906 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmua04040
]
114588906 (CACNA1B)
Ion channels [BR:
pmua04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114588906 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
114588906
NCBI-ProteinID:
XP_028570527
LinkDB
All DBs
Position
Z:complement(8352351..8696494)
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AA seq
1811 aa
AA seq
DB search
MARFGDDLPSRYGGGGGGGGGGSGGGPVVGGGGRGSSRQGPPGQPGQRPQVYKQSKAQRA
RTMAIYNPIPVKQNCFTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLA
LEQHLPVDDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVV
VLTGILATAGAQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFA
IVMFAIIGLEFYMGKFHKTCFNNETGERLGDFPCGEERPARQCEEGEICKQYWEGPNFGI
TNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNMWNWLYFIPLIIIGSFFMLNLVLGV
LSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLD
GRATSEGPILRGMAVVEISGGGTYNMLKRATIKKSKNDLIHAEEGEDHFTDVCSVGSPFA
RASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWMVLCVVALNTLCVAIVHYDQPEG
LTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPG
TSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQ
LFGGQFHFSDETPTTNFDTFPTAILTVFQILTGEDWNAVMYQGIESQGGVHSGMFSSIYF
IVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVADVSPLSA
ANISIAAFVKQTRGTVSRSSSVSSVNSPKQQNASKSKSVWEQRTSQIRMHNFRTSCEALY
NELDPEDRVRYATNLHIRPDMKTHLDRPLVVEPRSDSRNNNINKLSPVDVQEVTEEVKPP
PAVSTEGQRKHHRHRDKDKGGEQEKSNVPKDENGESGPNHKEERHRTHRSRSKEGERSGK
EGKSERSRGQEGGRRHHRRGSVEEGAEREHRRHRGHRHSAERQAKEGNGTINGAKTERRS
RHRGGSRPGNREGDPGSKGEGGEEPHRRHKMRHKALSTYDSVDKPNGEKEGEAGEKELRN
HQPREGQCDTEASGSVTVAPLHTLPSTCLQRVLEQPEDADNQKNVTRMGQPSLDKSATVN
IPVTVTAPPGEAAIIPMNNIEFETKIEEKKDMDVDDDFTEKGPKPILPYSSMFILSPTNP
IRRLCHYIVNMRYFEMVILIVIALSSIALAAEDPVQAESPRNEALKYLDYIFTGVFTFEM
VIKMIDLGLILHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGNKGKDINTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDE
SKELEKDCRGQYLDYAKDDVQAQPRQWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHS
VDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEK
NERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYG
APQPYEDMLKCLNIVFTSMFSLECVLKIIAFGALNYFRDAWNIFDFVTVLGSITDILVTE
IADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIALNDDSAINRHNNFQTFLQALMLLFRSATGEAWHEIMLACLSNQACDKLS
NLGKNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRV
WAEYDPAACAW
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgacctacccagccgctatggaggtggtggcgggggtggcggc
ggcggcagcggcggcgggccggtggtgggcggcggaggccgcggcagtagccgccaagga
cccccgggccagcccggccagcgaccccaggtgtacaaacaatctaaggcccagcgggcc
cggaccatggcaatttacaaccccatcccggtcaagcagaactgcttcacagtcaaccgc
tccctcttcatcttcagcgaggacaacgtgatccgcaagtatgccaagaggatcacggag
tggcctccttttgaatatatgatcttggctacaatcattgctaattgcatcgtcttggcc
ttggagcaacacttaccagttgatgacaagacgcccatgtcagagaggctggatgacact
gagccatattttattggaatattttgctttgaagctggtattaagatcatcgcgctgggt
tttgctttccacaaaggctcttatctccgaaatggctggaacgtgatggattttgttgtc
gtccttacagggattctggctactgctggggctcagtttgacttgcggacgttgagagct
gtccgagtgctgaggccgctgaagcttgtatcaggaatcccaagtttgcaggttgttctc
aagtccatcatgaaggcaatggtacctctcctgcagatcgggctcctcctcttctttgcc
attgtgatgtttgctatcattgggctggagttctacatggggaagtttcacaaaacctgc
ttcaacaatgaaacaggggagaggctgggagatttcccctgtggagaggagaggcctgca
aggcaatgtgaagaaggagaaatttgcaagcagtactgggagggccccaactttggaatc
accaacttcgacaacatcctctttgctgtgctcactgttttccagtgtatcacgatggag
ggttggactgacattctctacaatactaacgacgctgcagggaatatgtggaactggctt
tacttcatccccctcatcatcatcggctctttcttcatgctcaacttggtccttggtgtc
ctatcaggtgagtttgccaaagaacgagagagagttgagaacaggagggccttcctgaag
ctccggagacagcagcagattgaaagagaactcaatggctatttggagtggatctttaag
gcagaggaggtgatgttagcagaagaagacaagaacgccgaagagaagtcaccccttgat
gggagggccacttctgaaggcccaatcctgcgaggcatggcagtggtggagattagcggc
ggaggcacctataacatgctgaaaagagccacaatcaagaagagcaaaaatgacctaatc
catgctgaagaaggggaggaccacttcacagatgtttgttctgttggttcaccatttgcc
cgggccagcctgaagagcggcaagaatgagagttcctcctacttccgtaggaaagagaag
atgttccggttcttcatccggcgcatggtgaaagcacagagcttctactggatggttctc
tgtgttgtggctctcaacaccctgtgcgttgccattgtgcattatgaccagccagagggg
ctcactactgctctgtattttgcagaatttgtcttcctcggcctgttccttacagagatg
tctctgaagatgtatggcctggggccaaggaactatttccattcctcattcaactgcttt
gactttggggtgattgtggggagcatcttcgaagtcatctgggctgcagtgaagcctggg
acctcctttggcatcagcgtgttgagggctctcaggctgctgaggattttcaaagttacc
aagtactggaactccttgaggaacctggtggtctccttgctgaattcaatgaagtccatc
atcagcttgctgttcctcctcttcctcttcattgttgtgtttgctttgctggggatgcag
ctttttggaggacagtttcattttagtgacgaaacaccaaccacaaactttgatactttc
cccactgctattctaactgtgtttcagattctgactggagaagactggaatgcggtgatg
taccaggggatagaatctcaagggggcgtccactcaggaatgttctcatccatctacttc
attgtcttgacactgttcggtaactacacgctcctgaacgtcttcttggccattgctgtg
gacaaccttgccaatgcacaggaattgaccaaggatgaagaggagatggaagaggccacc
aatcagaaacttgccctgcagaaggccaaggaagtagctgatgttagtcccctgtcagcc
gctaacatttccatagcagcttttgtaaagcaaacacgaggtactgtatcacgcagctcg
tcggtctccagcgttaattcacccaagcagcagaatgcctccaagtccaaatccgtgtgg
gagcagagaaccagccagatccgaatgcacaacttccggacgagctgcgaagccctgtac
aacgagctggacccagaagatcgagttcgttatgctaccaaccttcacatccgcccagat
atgaaaactcacttggaccgccccctagtggttgagccaaggagtgacagccgcaacaac
aacatcaacaagctgagtcccgttgatgtgcaagaggtcacggaggaagtgaagccccca
ccagctgtgagcactgaggggcagcggaagcatcaccgacatcgagataaggacaagggg
ggagaacaggagaagagcaatgtgccgaaggatgagaatggagaatctggcccaaaccat
aaagaggagcgtcatcgaacacacaggagccgcagtaaagagggcgagaggagtgggaag
gaagggaaaagtgagcgcagccggggccaggaaggaggtaggaggcatcaccgccgtggg
tcagtggaggaaggagccgagagagagcacagacgccatcggggtcaccggcactcagcc
gagcggcaagcaaaagaaggcaatggaaccatcaacggagccaagacggagcgtcgttca
cgtcaccggggtgggtccaggcctgggaaccgggaaggtgaccctggctcgaaaggggaa
ggaggggaagaaccccacagacggcacaagatgcgacacaaggccctgtccacgtatgat
tcagtggacaagccgaatggggaaaaggagggagaggcaggagagaaggagctgaggaat
caccagccaagggaaggtcagtgtgacacagaggccagtgggagtgtgactgttgcccct
ctgcacaccttgcctagcacttgtctgcagagggtgcttgagcagccagaagatgctgac
aatcagaagaacgtcactcgcatgggtcagccatctctggacaaatctgcaactgtgaac
attcctgtcactgtcacggcacctcctggggaagccgccatcataccaatgaacaacatt
gaatttgaaactaaaatagaagagaagaaagacatggatgtggatgatgactttacagag
aagggaccaaaacctatcctgccatatagctccatgttcatcttaagtcctacaaaccca
atccggcgactgtgccattacattgtgaacatgcgttactttgaaatggtcatcctcatc
gtcatagccctcagcagtattgccctggcagcggaagaccccgtccaagctgagtcacca
aggaatgaggctctcaagtacctggattacatatttacaggtgtctttacatttgagatg
gtgataaagatgattgacttgggcctaatacttcatcctggtgcctattttcgtgacctc
tggaacatcctggattttattgtggtcagtggggctctggtggctttcgccttttcgagt
ttcatgggagggaacaaaggcaaagatataaacaccatcaagtccctgagagttctgaga
gttcttcggcctctgaagaccatcaaacgtttgccaaagctgaaggcagtctttgactgc
gtggtgaattctctgaagaatgtcctcaacatcctcattgtctacatgctcttcatgttc
atctttgcagtcatagcggtgcagcttttcaaagggcgattcttctactgcacggacgag
tccaaggagctggaaaaagactgcaggggccagtatctcgattatgcaaaagatgatgtg
caagctcagcccaggcaatggaagaaatacgaattccactatgacaatgtcctctgggct
ctgttgacactcttcactgtttccacaggagaggggtggccaactgttttaaagcattct
gttgatgcaacgtatgagaaccaaggcccaagtcctgggtaccggatggagatgtccatc
ttctatgtggtgtattttgtcgtcttcccctttttcttcgtgaacatctttgtggctttg
atcatcatcaccttccaggagcagggtgacaaagtgatgtctgaatgcagccttgagaaa
aatgagagggcctgtatagactttgccataagtgccaaacccctgacccgctacatgcct
caaaacaagcagtcgttccagtacaagatgtggaagtttgtggtgtctcctcctttcgag
tatttcattatggtcatgatcgcactcaacaccatcgtgctgatgatgaagttctatggt
gccccacagccatatgaagatatgctgaaatgcctcaacattgtgtttacatccatgttt
tctctggagtgtgtgctgaagatcattgcctttggcgccctgaattattttcgtgatgcc
tggaacatctttgattttgtcacagtcttgggaagtattactgatattttagtaacagag
attgcggacacggacaatttcatcaacctcagcttcctccgcctatttcgggctgccagg
ctcatcaagcttcttcgccagggctacaccatccggatcctcctctggacctttgtccag
tctttcaaggcattgccttatgtgtgtcttctcattgccatgctcttcttcatctatgcc
attattggcatgcaggtctttggaaacattgcactgaatgacgactctgccatcaatcga
cacaacaatttccaaacgtttttgcaagccctgatgctgcttttccggagcgccactggg
gaagcttggcatgaaatcatgcttgcatgtctcagcaaccaagcctgcgataagctctcc
aaccttggcaaaaatgagtgcggcagtgactttgcctacttttactttgtctccttcatc
ttcctctgctcctttctgatgttgaacctgtttgtggctgtaattatggacaactttgag
tacttgacacgagactcttccatcctaggaccccaccatcttgatgagtttatccgcgtc
tgggctgagtacgaccctgcagcctgcgcttggtaa
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