Podarcis muralis (common wall lizard): 114588953
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Entry
114588953 CDS
T06059
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114588953 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmua03041
]
114588953 (PRPF4)
Spliceosome [BR:
pmua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114588953 (PRPF4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
114588953
NCBI-ProteinID:
XP_028570631
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Position
Z:12646331..12658005
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AA seq
523 aa
AA seq
DB search
MAASRIAVVNKGSKTKASDEGDVPPAKKAPIFYGSLEEKERERLLKGESGMMGKDAVKAA
IEAGNINITSGEVFDLEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPI
TLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNTLKTARL
WIANYSLPRAMKRLEEARLLKEVPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISYCNF
SPNSKLLATACWSGLCKLWSVPDCNLIHTLRGHNTNVGAIVFHPKATISLDKKDVNLASC
AADGSVKLWSLESDEPVADIEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEIL
HQEGHSKGVYDIAFHVDGSLSATGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG
YHIATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKVWTH
PGSSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWMAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtcgcggatcgccgtggtgaataagggttcaaaaacaaaggcttcagatgaa
ggggatgttcctccagcaaaaaaagccccaattttctatgggagcttggaggagaaagag
cgagagcgtcttctcaaaggggaatctgggatgatgggcaaggatgcggtcaaagcagct
attgaggctggcaacatcaatatcacaagtggtgaagtttttgacttggaagagcacatc
agcgagcgccaggcagaggtcctggcagagtttgagcgccggaagcgggccaggcaaatc
aatgtttccacagatgactctgaggtcaaggcctgcttacgagccctcggggagcccatc
acactttttggagagggccctgcagaaaggagggagaggctacgtaatattctgtctgtg
gttggcacggacgcattgaagaagaccaaaaaagatgatgagaagtccaagaaatcaaaa
gaggagtatcagcaaacctggtaccacgaaggaccaaataccttgaagacagccagactg
tggatcgccaactactctctccctcgggcaatgaagcgattggaggaagcccggctgctc
aaggaggtccctgaggccacacggacatcccagaaacaggagctgcacaaatctctaagg
tctttgaataatttctgcagccaaattggggacgaccgccctatctcctattgcaacttc
agccccaactccaagctcctggctacagcttgctggagcggcctctgtaagctgtggtca
gtgccggattgtaatctcatccacactttgcgagggcacaacaccaacgttggagccatt
gtatttcaccccaaggcaaccatctccctggacaagaaggacgttaacctggcttcatgc
gcagcggatggctctgtcaaactctggagtcttgaaagtgatgaaccagtggctgacatc
gagggacacacagtgagagtagcccgggtggcatggcatccctctggcaggtttctgggc
accacctgctatgaccactcttggcgcctgtgggacctggaggctcaggaggagatcttg
caccaggaggggcacagcaaaggagtttacgacatcgccttccatgttgatggctccctt
tctgccactggtggccttgatgcatttggccgcgtgtgggatctgcgcacggggcgttgt
atcatgtttttggagggtcatctcaaggagatctatgggatcaacttttcccctaacggg
taccacattgccactggcagcggtgacaacacctgtaaagtgtgggatctccgccagaga
aagtgcatctacaccatccctgcccatcagaacctggtgaccggagtgaagtttgaacca
aatcatggcaacttcctgcttactggcgcttacgacaacacagccaaggtctggacgcac
ccaggctcatccccgctgaaaaccttggcaggacacgagggcaaagtcatgggcttggac
atctccctggacgggcagctgatcgccacatgctcttatgacaggactttcaagctttgg
atggcagagtag
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