Podarcis muralis (common wall lizard): 114589075
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Entry
114589075 CDS
T06059
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114589075 (UPF3B)
03015 mRNA surveillance pathway
114589075 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114589075 (UPF3B)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114589075 (UPF3B)
mRNA cycle factors
P-body specific factors
114589075 (UPF3B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
114589075
NCBI-ProteinID:
XP_028570931
UniProt:
A0A670K6I7
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Position
Z:39730092..39742423
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AA seq
539 aa
AA seq
DB search
MLLPPPPPASRSPPPVPARAAAANGRADLARRGRREASAARAGALTGEGLVGLSAFAMKE
DKENARPKEKRGAPVTPTGSVGAAAGAVAADAKAGGEPDRLERPKDKKEILSKVVIRRLP
PSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVF
VDHKGLEYPAVVEFAPFQKAAKKKSKKKDAKAGTIEDDPEYKKFLENYSADDEKLTSTPE
TLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRKWKEE
ERRKRKEAEKTKKVERCPEKERDKSKDEPKIKLLKKPEKDERDFEKKEKAKKPEKESLRE
EKAASATSSMPARRSDGEAKEEKSKKLEDDCGKDYREREREYDRDREYERMQRERDKLRR
QEEERRRQKERFEKEKVFRRKEEDVKRERDSLREKGKRAELAEYMGNAEKSEKVTKEEKK
EDMAKRDRIRNKDRPAMQLYQPGARNRSRLSGYDESSAKSPDQGVDKKQECETSNTKEE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccgccgccgccgccggcgtcccgctctccccctccggttcctgcgagagca
gcggcggccaatgggcgcgcggatctggcgaggcgcgggcggagggaggcatcggcggcg
cgggcgggggcgttgacgggcgaaggcctggtggggctctccgcgttcgcaatgaaggaa
gacaaggagaacgcgcggccgaaggagaagcgcggggctcccgtcaccccgaccggcagc
gtgggagcagcggcgggggcggtggcagcggacgccaaggcgggaggcgaaccggacagg
ctggagcgcccgaaggacaagaaagagatcctgagcaaggtagtgattcgacgcctgcct
cccagcttgaccaaggaacagcttgaagaacatctccaacctttgcctgaacatgactat
tttgaattctttgctaatgactccagtttgtaccctcacatgttttccagagcatacatc
aactttaaaaaccaagaagacattgttctgttcagggatcgctttgatggttatgttttt
gttgatcacaaaggtctagaatatcctgccgtagtggaatttgcgccgtttcaaaaagct
gccaaaaagaagagtaagaaaaaggatgccaaagctggaaccattgaagatgatccagaa
tataagaagtttttggaaaactatagtgctgatgatgaaaaattaacatccacccctgag
acattgctggaggaaatagaagcaagaaacaaagaattaatagcaaaaaaaacaactcct
ctgttgaacttcttgaagaataaacagcggcttagagaagaaaaacgagaggagaggagg
aggagagaactagagaggaaaagacaacgagaagaagaaagaagaaaatggaaagaggaa
gaaagaaggaaaaggaaagaagccgaaaaaacaaagaaagtggagcgatgcccagaaaaa
gaaagggacaaatcaaaggatgaaccaaagattaagctacttaagaagccagaaaaagat
gaaagagactttgaaaagaaagaaaaggccaagaaaccggagaaagagagcctgagggag
gaaaaggcagcaagtgcaaccagcagtatgccagccaggcgctccgatggggaggcgaag
gaggagaagtccaaaaaattggaagatgactgtggaaaagactatagagaaagagagaga
gaatatgaccgagacagagagtatgagagaatgcaaagagaaagagacaaactccgacgc
caagaagaagagagaaggaggcagaaagagcgcttcgagaaagagaaggtttttagaaga
aaggaggaagatgtgaaaagggaaagagactcattgcgagagaaagggaagagagctgaa
ttggcagagtacatgggcaatgcagaaaaatccgagaaagtaaccaaagaggagaaaaaa
gaagatatggctaagagggatcgcattagaaacaaggatcgcccagccatgcagctctac
caaccaggagctcggaatcgaagtcgtttgtcaggctatgatgaaagctctgcaaagtca
cccgatcaaggagtggataagaagcaggagtgcgagaccagtaacacaaaagaagagtga
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