Podarcis muralis (common wall lizard): 114590590
Help
Entry
114590590 CDS
T06059
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmua03036
]
114590590 (DICER1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114590590 (DICER1)
microRNA pathway
RISC loading complex
114590590 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
SLFN-g3_helicase
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
114590590
NCBI-ProteinID:
XP_028572674
UniProt:
A0A670HWP9
LinkDB
All DBs
Position
1:21122943..21179734
Genome browser
AA seq
1920 aa
AA seq
DB search
MKSPALQFLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSTVRTHSDLK
VGEYSSLEITEAWTKEKWNQEFAKYQVLVMTCRVALNILKNDHLSLSNINLLIFDECHLA
IQDHPYREIMQLCESCPSCPRILGLTASILNGKCDPAELEEKIQKLENILKSSAETATDL
VVLDRYTSQPCEIVVDCGPYADKSGLYERLLTELDDALHFLNDCNISVLCRERDSTLISK
QILSDCRAVLLVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDEDE
DEEIEEKEKTETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRSKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADSDKIKCFEEDLKTYKAIEKILRNKCSKSVDTSETE
NEPIIDDDDIFPPYVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
NTFYSTLYLPINSPLRASIVGPPMNCTRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLTDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTARCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFRPTDADSAYCVLPLNVVDGSSTLDIDFKFMEDI
EKSEARTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGV
GVKSLPSDFRYPNLDFGWKKSIDSKSFISASSSSVAENENYFKHSAIVVPENAAYQGANK
TSSADKHDQMSVSNRTLIESPSKLQNDVSVELATVNGVSYNKNLANGNFDLASRDFCQGN
QLNYSRQEIPVQPTTSYPIQNLYNSENQLKPSNECTLLSNKYLDGNANKSTSDGCPRMAL
NTSASDACDLSKERMDSVTSPSKGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYIVNQDKSNTDKWEKDEMTKEGLMSNGKLDDDYDDDDDDDLMWRVPKEEADFEDDF
MEYDQEHIKFIDNMLMGSGAFVKKISLSPFSPTDNSYEWKAPKKSTLTNVQFASDFDDFD
YSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGIDAGKQSISYDLHTEQCIADKSIADC
VEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESALYSYREHFNHQQKHSSAICV
SASLANQESSLYKDLMYGCLKIPPRCMFDHPDAERTLHHLISGFENFEKKISYSFKNKAY
LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN
TIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDI
EVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEP
ETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcagttcctcagcatggcaggactacaactcatgacccctgct
tcctcaccaatgggtcctttttttggacttccatggcaacaagaagcaattcatgataat
atttacacaccaagaaaataccaggttgaactgctggaagcagctctggatcataataca
atagtctgtttaaacactggctcagggaagacttttattgcagtactactcattaaagaa
ctgtcttatcagatcaggggagattttaacaaaaatggaaaaagaacagtattcttggtc
aactctgcaaaccaagttgctcagcaagtgtcaactgttaggacgcattcagatctcaaa
gtgggagagtattcaagtttggaaataactgaagcatggacaaaagagaaatggaaccaa
gaatttgctaagtatcaggttctcgtaatgacctgtcgtgtcgctttgaatattttaaaa
aatgaccatttatccctgtcaaacattaatcttcttatttttgatgagtgccatcttgca
attcaggatcacccctatcgagaaattatgcagctttgtgagagttgtccgtcatgcccc
cgaattttaggattaacagcttccattttaaatgggaaatgtgatccagcagagttggaa
gagaagattcagaaattggagaacattctaaagagtagtgcggaaactgcaactgattta
gtggttttggacaggtatacttctcagccttgtgagattgtggtagattgtggaccatat
gctgacaaaagtgggctctatgaaaggttgttaacggagctggatgatgcacttcacttt
ctgaatgattgcaacatatctgtactgtgtagggagagagattctaccttaatttctaaa
cagatactgtcagactgccgagcagtgttgcttgttctgggaccctggtgtgctgataaa
gtagctgggatgatggtgagagagctacagaagtacataaagcacgagcaagaggagctg
cacaggaaatttttattgtttacagatactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaaccccaaaagtaataaaactg
cttgaaattttgcgtaaatacaagccctatgaacggcaacagtttgaaagtgttgagtgg
tataataatcggaatcaggataattatgtgtcctggagtgattctgaggatgaggacgaa
gatgaagaaatagaggagaaagagaaaacggaaactaattttccttctccctttactaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgttttgaacaggttg
ataaaagaagctggcaaacaagacccggagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagccccgtagtaaacagatggaagtagaattccgaaag
caggaagaggtacttagaaaatttcgagcacacgagaccaacttactaattgcaactagt
attgtagaagagggtgttgacataccaaaatgcaatttggtggttcgttttgatttgccc
acagaatatcgttcctatgtgcagtccaaaggaagggccagggcacctatctcgaattac
atcatgttagcagattcagacaaaatcaaatgttttgaagaagatcttaaaacatacaag
gcaattgagaagatcctgaggaacaaatgctcaaagtctgtggatactagtgaaaccgaa
aatgaacccattatagatgacgatgatatattcccaccatatgtgctaagaccagaagat
ggcggtccaagagtcacaataaacactgctattgggcacattaataggtactgtgctaga
ctgccaagtgacccgtttactcatctagctcccaagtgtaaaactagagaactccctgat
aacacattttattcaactctttatctacctatcaattctcctctacgagcatcaatagtt
ggtcctccaatgaattgcacaagattggcagagagagttgttgctcttatttgctgtgaa
aaattgcataagattggtgaactggatgatcacttgatgcctgttgggaaagagacagtg
aaatatgaggaggaacttgatttgcatgatgaagaagaaaccagtgttccaggaaggcca
ggctctacaaaacgaaggcaatgctaccctaaagctattccagaatgtttgacggatagt
tatcccaaacctgaccaaccctgttacctttatgtaattggaatggtattaactacccct
ctacctgatgagctcaacttcaggcggcgaaagctatatcctcctgaagatactgcaaga
tgttttggaatactgacagccaaacctatacctcagattcctcactttcctgtgtatacc
cgctcgggagaagtgaccatatctattgagctaaagaaatcaggattcactttgtcttta
caaatgcttgagttgatcacaagacttcaccagtacattttctctcacattcttcggctt
gagaaacctgcactagaattcagacctaccgatgctgattcagcctattgtgttctacct
cttaatgttgttgatggctccagcactttggacattgattttaaatttatggaagatatt
gaaaaatctgaagcacgtacaggcattcccagtacacagtatacaaaagagacacctttt
attttcaaattagaagattaccaggatgcagttatcattccaaggtatcgaaattttgat
cagcctcatcgattttatgttgctgatgtctacacagatcttactccactgagcaaattt
ccttccccagaatatgaaacttttgctgaatattataaaaccaagtataaccttgacctg
accaatctcaaccagccattgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgtcatctgaatcagaaggggaaagctcttccactgagtagtgctgagaagagg
aaagctaagtgggaaagtctacagaacaaacagattctggttccagaactctgtgctatc
catcctattccagcatcgctgtggagaaaagcagtttgcctccccagcattctttatcgt
cttcactgccttttgacagccgaggaactcagatcccaaaccgccattgatgctggtgta
ggagttaagtcactcccttcagatttcagatatcctaacctggactttgggtggaagaag
tctattgacagcaaatccttcatctctgcttctagctcttctgtagcagagaatgaaaat
tattttaagcacagcgcaattgtagtccctgaaaatgctgcatatcaaggtgctaataaa
acctcttctgcagataagcatgaccaaatgtctgtgagcaacagaacattgattgagtca
cctagtaaactccaaaatgacgtctcggtagaactggcaacagttaatggtgtttcttac
aataaaaatcttgccaacggcaattttgacttagctagccgagacttttgccaaggaaat
cagctaaattactccaggcaggaaatacctgtacaaccaactacctcgtatcctattcag
aatttatacaacagtgagaaccagctcaagcccagcaatgaatgtactctactgagtaat
aaatatcttgatggaaatgctaacaaatctacctcagatggatgtcccagaatggccctg
aacaccagtgcttcagatgcttgtgatctttcaaaggaaagaatggattctgtaacaagc
ccttccaagggatactcctcaaaaacccttggcccaaaccctggtctcattcttcaggct
ttgactctctcaaatgctagcgatggatttaatctggagcgtcttgaaatgcttggtgat
tcatttctaaagcatgccatcactacatatttgttttgcacttaccctgatgctcatgag
ggacgcctgtcgtatatgagaagcaaaaaagtcagcaattgtaatttgtatcgtcttgga
aaaaagaaagggcttcctagtcgcatggtggtatctatttttgacccacctgtcaactgg
cttcctcctggttacatagtaaaccaagacaagagtaatacagacaaatgggaaaaagat
gaaatgacaaaagagggattgatgtctaatggaaaacttgatgatgattatgatgatgac
gatgacgacgacttaatgtggcgagtacccaaggaggaagctgactttgaggatgacttt
atggaatacgatcaggagcatatcaaattcattgacaatatgttaatgggttctggagca
tttgtgaagaaaatatccctttccccattttcacccactgataacagttatgagtggaaa
gcacccaaaaaatcaaccttgactaatgtccagtttgcatcagattttgatgattttgat
tacagctcctgggatgcaatgtgctatctagaccctagcaaggctgttgaagaggatgac
tttgtagtgggtttctggaatccatcagaggaaaattgtggtattgatgctggaaaacag
tccatctcctatgacttacatacagaacaatgcattgctgacaaaagcattgcagactgt
gtggaagcccttctgggctgctatctgaccagctgcggtgaaagagctgcccagcttttc
ctctgttcactggggctaaaagtgcttccggttattaagaaaactgattgggagagtgct
ctgtattcctacagagagcattttaaccaccagcagaaacattcttcagcaatctgtgtt
tctgcctctctagccaatcaagagtcttctctgtataaagacttgatgtatggctgttta
aagattcctccaagatgtatgtttgatcatccagatgctgagcgaaccttacatcacctt
atatctggctttgaaaactttgagaagaaaattagctacagttttaagaataaggcttat
ctacttcaggcatttactcatgcctcctatcattacaacaccattactgattgttaccag
cggttggaattcctgggagatgcaattttggactacctcataaccaagcacctttacgaa
gacccacggcagcactctcctggagttctaacagacctgcgatctgctcttgttaacaac
accatctttgcctcattggctgtaaagtacgattaccacaaatacttcaaagctgtctct
cccgagctgtttcatgttattgatgactttgtgcagtttcagatggaaaaaaacgaaatg
caaggaatggattccgagctccgaagatctgaagaagatgaagaaaaagaggaggacata
gaagtaccaaaggccatgggggatatatttgagtcactcgctggtgccatttacatggat
agtggaatgtctcttgaaatggtttggcaagtgtactatccaatgatgaggccattaata
gagaaattctctgcaaatgtgccccgttccccagtacgagagctgctggaaatggagcca
gagacagctaaatttagtcctgcggaaagaacctacgatggaaaggtcagagtaactgtg
gaagttgtaggaaagggaaagttcaaaggtgttggaagaagctatcggatcgctaaatct
gctgcagcaagaagagctctacgaagcctcaaagcaaatcaacctcaggttccaaatagc
tga
DBGET
integrated database retrieval system
