Podarcis muralis (common wall lizard): 114590672
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Entry
114590672 CDS
T06059
Symbol
TNRC6C
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114590672 (TNRC6C)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114590672 (TNRC6C)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114590672 (TNRC6C)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114590672 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
114590672
NCBI-ProteinID:
XP_028572879
LinkDB
All DBs
Position
2:complement(35640813..35756093)
Genome browser
AA seq
1975 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTSTSTSTSTITNNSNG
KRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLISTSPAQGTGQAGASP
PPQPGVGGHHHPSKTQTPTALQDEAHSVHSRHIEAESPGEPRCRRGDSSAHNVASPRMVG
QHLFSDLGHSGLGDHYENTHWGQQPTFRSEANCSWDKVIIDRTDKEAWPSITGTETESAS
ECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKPNGNNGTNGALIQSTSNQSALGAGGA
NGNGNSARVWGVATGSNSGLAHCSASGGDGKMDNMIGDGRSQNCWGASNSNAGINLNLNP
NANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEP
QTSTSQNVSFSVQPQNLNTDGPNNANPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHL
QSLPGANGTSVSQVSGGSGEGMGNSVWGISPGNPATGNSNSGFSQGNGDTVNSALSAKQN
GSSSAVQKEGNGTSAWDSGPPAGPGILAWGRGSGNSGVGNMHSGAWGHPSRSTSNGVNGE
WSKPPNQHSSNDINGKGSTGWDSSSVTSQNPAMQQGNEQINSWAKAAASGNTGSEGSNDS
NGSQNEGSTGREGTGEARRRDKGMLDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTAWEF
EESPRSERKNDNGTEAWGCAATQPSNSGGKNDGSIMNSTNTSSVSGWVSSPPATVPTNTG
WGDNNNKAPNGPGGWGEPASSTAVNNAAAAKSGHTWSGTTNQEDKSPTWGEPQKPKSQNW
GDGQKSNPGWTSGGGDWVDSSSVPGHLGDGKKNGSGWDADNRAGSGWNDTTRSGTTGWGN
GTNSKANTGTSWGESLKPGPQQNWASKSQDNNVSNWGGAASVKQTGSGWVGGPVPAKQKD
SSEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPVIQSSTTTATTST
TIINANMAEPQPPHQSSAQSNRSPLLGPAGWGEMPAIHAKPEASWGEPSSPSAAVDNGTS
AWGKPPSSGTGWGDNSAESAGSYGRASAPAAAPVLCKPASKSMQEGWGGGGDEVNLSTSQ
WEDEEGDMWNNTASQESNSSCSSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLTDMGF
PREPAEEALKSNSMNLDQAMSALLEKKVEMDKRGMGVADYNGMVTKPLGCRPPPISKESS
MDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQI
PSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKN
IGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPIRQQEQQVART
INNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPPAGKSAMDNFSPHPQAPGLSDLQTKE
QQSSPNTFAPYPLAGLNPNMNVNSMDIPGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAAS
PLDQNPSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNNESPASPPVAVPHSWSRAKSDS
DKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKS
GGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQA
SLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASQLGWTSSYSSGSAWSTDSSGRTSSW
LVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLG
NTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTTQTRLGSTSSSHGMVRNDAGHWNT
PCLGGKGSSDLLWGGVPQYSSSLWGPPSSDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
caacctgccggtaccagtaccagtacttccaccagcactattactaacaatagcaatggc
aagcgtgcatctgccaatgggcagcagccagctgcatcccgatacctgcctcgtgaggtg
cctccacgcttccgccaacaagaacagaagcagctcttaaaaagaggccagcctctgcct
actggaactctgatcagcacgagcccagcgcaaggtactggacaagcaggagcgagtcct
cctccacagccaggagtaggtggacatcaccaccccagtaaaactcagaccccaacagct
ctacaggatgaggctcactctgtacacagccgacatattgaagccgagagcccaggcgaa
cctagatgcaggaggggagacagctctgcacacaatgtagcgtctcctaggatggttggg
cagcaccttttctcagaccttggtcacagcggattgggagaccattatgagaatactcac
tggggacagcagcccactttccgaagtgaagccaattgcagctgggataaagtgataata
gacaggactgacaaggaagcgtggccttccattacaggaactgagactgaatctgcctca
gaatgtactacagacactgactctgcctccaactgtggctcagagaacagtagcatggct
acagggagtgcccaaggcaacttcactggacatacaaagaaacccaatggcaataatggc
accaatggagcactcatccaaagcacttctaaccagagtgcccttggagctggtggagca
aatggtaatggaaattcagccagagtgtggggtgttgccacaggttccaactctggctta
gctcattgctctgccagtggtggggatggaaagatggacaacatgattggagatggtaga
agtcaaaattgctggggtgcttccaactcaaatgctggcattaatcttaaccttaatcca
aatgccaatccagctgcctggcctgtactcggacatgaaggaactgtgggagcaggcaac
ccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaaccagaatggg
aacccaacgggcaccttaggtgcttggggaaacttgctgccgcaagagagcacagaacca
caaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaaccttaacactgat
ggaccaaataacgctaaccccatgaactcttcaccaaaccctatcaatgcaatgcagaca
aatggactgccgaactggggcatggctgttggcatgggggccatcatcccgccccacctg
caaagccttcctggtgctaatgggacatcagtttctcaagtcagtgggggaagtggtgaa
ggaatgggcaattcagtgtgggggatatccccaggtaatcctgccacaggaaacagcaat
tctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgctaaacaaaat
ggatccagcagtgctgtacaaaaggaagggaatggaacaagtgcatgggattcggggcct
cctgctggtcctgggatcttagcatggggcaggggcagtggcaacagtggcgttggtaat
atgcattctggtgcttggggccacccaagccgcagcaccagtaatggcgttaacggtgaa
tggagcaagcccccaaaccagcattccagtaatgacatcaatgggaaaggatcaacaggg
tgggatagctctagtgttaccagccagaatcctgccatgcagcagggcaatgaacaaata
aactcttgggccaaagctgcagcatctggcaacacaggtagtgaaggcagtaatgatagc
aatgggagtcagaatgaaggcagtactgggagggaaggaactggagaggctcgaagaaga
gacaagggaatgctagaccaaggacaagtccagttgccaaggaatgaccttgacccaagg
gttctgtccaacactggatggggacagactcctgtaaaacaaaacactgcctgggaattt
gaagaatccccaaggtctgaacgaaagaatgacaatggaactgaggcctggggttgtgca
gctactcagccttcaaactcggggggcaagaatgatgggtccatcatgaacagtacaaat
acctcttcagtatctgggtgggtcagctctccacctgcaacagttccaactaatacaggt
tggggcgacaacaataacaaagcgccaaatggcccagggggatggggagagccggcaagt
tctactgctgtcaataatgctgctgctgccaaaagtggccacacttggagtgggaccacg
aatcaggaggacaagtcgcctacttggggtgaacctcagaaacccaaatctcaaaactgg
ggagatggacagaaatcgaatccaggctggacttcagggggtggagattgggttgattcc
tcatctgtccctggacacttgggagatgggaaaaagaatggttctggatgggatgctgac
aatagagcagggtctggctggaatgatactacgcgttctgggaccactggatggggaaat
ggcacaaacagcaaggctaatacaggtacgagctggggggaatctttaaaacctggtcct
caacagaattgggcttctaaatcccaggacaacaacgtgagtaattggggaggagctgct
tctgttaaacagactggatcaggatgggttggtggaccagtgccagccaaacagaaagat
agtagtgaagcaacggggtgggaagagccctctccaccatccattcggcgcaagatggag
attgatgatggtacctcagcttggggtgacccaaattacaataacaacaagactgtaaac
atgtgggatagaaacaatcctgtaatccagagcagtaccacaaccgccaccactagcacc
accattatcaacgcaaacatggctgaacctcagccaccgcaccagtcaagtgcccagtca
aaccggtccccgctgcttggtccagcaggctggggagagatgcctgctatccatgcaaag
cctgaagcttcatggggagagccttcctccccttctgctgcagttgataatggcacttca
gcatggggaaagcctcccagcagtggtacagggtggggagataactctgctgagtcagca
gggtcatatggaagagcaagtgcaccagctgctgccccagtactgtgcaaaccagcttct
aaatctatgcaagaaggctggggcggtggtggagatgaagtaaatctcagtacaagtcag
tgggaagatgaagaaggagatatgtggaataatactgcttcacaagagagtaattcctct
tgtagctcctggggaaatgctccaaagaaaggacttcaaaagggcatgaagacatctagt
aagcaagatgaggcctggatcatgaaccgtctgataaaacagctcacagacatgggcttc
ccaagagagccagcagaagaggccttgaagagtaacagtatgaatctagatcaggccatg
agtgctctgctggaaaagaaggtggaaatggacaagcgtggaatgggtgtggctgactac
aatggaatggtcaccaaaccccttggctgccgcccaccaccgatctccaaagagtcttcc
atggaccgccccaccttccttgacaaggatggcggcctagtggaagagcccactacttca
ccatttttgccttcaccaagcctgaagctccccctttcaaacagtgcactccctaatcag
accctgggtgggattgcctcagggctgggcatgcaaaacttgaattcttctagacagata
ccgagtggcaatctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaa
cagccgcagcaaccgccagtgcaacctcttaactcatcccagcctagtcttcgtgctcaa
gtgcctcagtttctctcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaac
attggtctcaatcctgcactattaacctcgccaattaatcctcagcatatgacgatgttg
aaccagctctatcagctgcagctggcgtaccaacgtttacaaatccagcagcagatgtta
caggctcagcgtaatgtttccggacccatcagacaacaggagcagcaagttgcacgtaca
atcaataacatgcagcagcagatccagcagcaccagcgccagctggcccaggccctgctt
atgaagcagcagccaccccctccacatctatctttgcacccccctgcaggcaaatcagcc
atggataacttttcaccccatccccaggctcctggcctatctgacctgcagaccaaagag
caacagtcttcaccgaacacctttgctccttacccccttgctggactgaacccaaacatg
aatgtaaacagcatggacattcctggtggtttgtcagtgaaggacacttctcagtcccaa
tctcgccttcctcagtggacacatcccaactcaatggataatctctccagtgctgcttct
ccacttgaccagaatcctagcaagcacggtgctatccctggaggtctgagtattggtcct
ccaggaaagtcctccattgatgactcttatggccggtatgatctgattcaaaacaacgag
tcaccagctagtcctcctgtagccgttcctcacagctggtcacgtgccaaatctgatagt
gataaaatctccaatggctccagtatcaactggccaccagaatttcatcctggggtacca
tggaaaggattgcagaacattgaccctgagaatgatcctgacgttacaccaggaagtgtt
ccaacagggccaactattaacaccaccatacaagatgttaatcgctatctactcaagagt
ggagggtcatccccaacatcatctcagaatgccacgctgccttcatcgagtgcctggcca
cttagtgcctccggctacagtagctctttcagcagcattgcatccgcacctagcattgca
ggtaaactgtcagacatcaaatcaacgtggtcctctggcccaatttctcacacacaagcc
tctctgtcccatgaactgtggaaggtgcccagaaacactactgctcctacaagaccacct
ccaggcttaacaaacaccaagccatcgtctacttggggtgccagccaactgggttggacc
agctcttactcctctggctcagcatggagtactgacagctcaggaagaacaagtagctgg
ctggtcctccgtaacctcacaccccagattgatggctctacactgcgtactctatgcttg
cagcacggtcctcttattacattccatctgaacctgactcaagggaatgctgtggttcga
tacagttccaaggaagaagcagcgaaggcccagaaatctctgcatatgtgcgttttgggg
aacactaccatcttggccgagttcgccggagaagaggaagtgaaccgtttcttagcacaa
ggccagccactgccccccacctccagttggcagtccaacactggaaccactcagacacgt
ttgggctccacaagcagctcacacggcatggtgcgcaacgatgcaggccactggaatacc
ccctgcctaggtggcaaagggagcagtgacctgctctggggcggggtccctcagtactca
agcagcctttggggtccacccagttccgatgacggcagggttattggaagcccaacgcct
ttgaatactctgctcccaggtgaccttctcagcggggagtccatctag
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