Podarcis muralis (common wall lizard): 114592178
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Entry
114592178 CDS
T06059
Symbol
PNN
Name
(RefSeq) LOW QUALITY PROTEIN: pinin
KO
K13114
pinin
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114592178 (PNN)
03015 mRNA surveillance pathway
114592178 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114592178 (PNN)
03041 Spliceosome [BR:
pmua03041
]
114592178 (PNN)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114592178 (PNN)
Spliceosome [BR:
pmua03041
]
Complex C
Other components
EJC/TREX
114592178 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
114592178
NCBI-ProteinID:
XP_028575978
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All DBs
Position
1:complement(32815659..32827926)
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AA seq
691 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLTITGPGGGRGRGSIL
LRRGFSDSGGGPPAKQRDLEGATNRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNDHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLFDDSQKNXMVSLFENRRIEFAEQINKMEARPRRQSLKEKEHQEVQ
KEEKKEDQNKEQEEGKAVQQVEEMETGNRSNDVEMEEVGEEKEVGASHSDGEIEQEEEEQ
KEEMEVKVDEGPEIKENDRQQDNQEEDVALGKEEGENTLPVDGEQDVMETNEADHAEPLE
NENSKEVEPEIESNPQPEQEGPVAPLEKEEGNKPEVEAEPEEAEEKEPESIAVSEAEAQP
RPEAGLQPQPSPQLESTQDQEPQVDKEEMVVPENLPETQADQIQAVSIEVKNKVRSRSRG
RARNKGSKSRSRSTSSSTSSTSSTSSSSGSSSSSGTSSSRSSSSSSSSTSGSSSRESSSS
SSSSESRSRSRGRGHNRDRKRRRSLDRKRRDNAGVDRSHKSSKGSSRDAKGSKDKSSRSD
RKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgggctctgcaggagcagctcgagaaggccaaggagagcctcaag
cacgtcgacgagaacatccgcaagctcacggggcgggaccccaacgatgtgcggcccgct
caagggagattattgaccatcacaggccctggtggaggtagggggcgtggaagtatatta
cttaggcgtggattctcggatagcggaggaggacccccagccaaacagagggatctagaa
ggggcgaccaataggctagctggggaacgtcggacaaggagagaatcacgccatgaaagc
gacgcagaggatgatgatgttaaaaaaccagcgttgcagtcttctgttgttgctacctcc
aaagaacgaacacgccgagaccttattcaagatcaaaacatggatgaaaagggaaaacaa
aggaatcggcgcatatttggcctgttgatgggtactcttcagaagttcaaacaagaatca
acagtcgctactgagaggcaaaaaagacggcaagaaattgaacagaaacttgaagtgcag
gcagaggaagagagaaagcaggttgaaaacgagaggcgagagctctttgaggaaagacgt
gctaaacaaacagagctgcggctattggaacagaaagttgaacttgctcagctgcaagaa
gaatggaatgatcataatgccaaaataattaaatatataagaacaaagacaaagcctcat
ctgttctacatacctggcagaatgtgtcctgctacccagaagctgtttgatgattcccaa
aaaaattaaatggtatcactgtttgaaaataggcgcattgagtttgctgagcaaattaac
aaaatggaagccaggcccaggcgacaatctctgaaggaaaaagaacaccaggaggtgcag
aaggaagaaaagaaggaagaccagaacaaggagcaagaagagggtaaggcggttcagcag
gtggaagagatggagacaggtaatcggagcaatgatgtagaaatggaagaggtaggggaa
gaaaaggaggtaggtgctagtcacagtgatggagagatagaacaggaggaggaggagcag
aaagaggaaatggaggttaaggtagatgagggaccagagattaaggagaatgataggcag
caggataatcaggaggaggatgttgcgttagggaaagaggaaggtgaaaatacgctgcca
gtagatggcgagcaggatgtgatggaaaccaatgaggcagatcatgcagagccactagaa
aatgagaatagcaaagaagtggaaccagaaattgagagtaatcctcaaccagagcaggag
gggcctgttgctcccttggagaaagaggaaggcaacaagccagaagtagaagctgaacca
gaggaggcagaagagaaggagccggaatccattgcagtgtccgaggctgaggcccagcct
cgaccagaggctgggcttcagccacagccttcaccacagttggaatccacacaagatcaa
gagcctcaggtagacaaagaagaaatggtagtgcctgagaatctgcctgaaactcaggca
gaccaaatccaggcagtaagcatagaagtcaagaacaaggttaggagcaggagcagaggt
agagcaaggaacaaaggcagcaagagtcgaagtcgcagtactagcagcagcaccagtagc
actagttctacaagcagtagtagtggcagcagttctagcagcggcaccagcagtagtcgg
agtagttcctccagcagcagcagcactagcggaagtagcagtcgagagagtagcagtagt
tccagcagcagcgagagcagaagtcgaagcagagggcgtgggcacaatagggacaggaag
cgtaggaggagtctggatcgaaagcgaagggataatgcaggagtagacaggagtcacaag
tcttcgaaaggtagcagcagagatgcgaaaggatcaaaggataaaagctcaaggtcggac
agaaagaggtctatatcagaaagtagtcggtcaggcaaaagaacttcgcggagtgaaaga
gaccgtaaatcagacaggaaagacaaaaggcgttga
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