Podarcis muralis (common wall lizard): 114592949
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Entry
114592949 CDS
T06059
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114592949 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114592949 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114592949 (SMARCC2)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114592949 (SMARCC2)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114592949 (SMARCC2)
PBAF complex
114592949 (SMARCC2)
GBAF(ncBAF) complex
114592949 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
Motif
Other DBs
NCBI-GeneID:
114592949
NCBI-ProteinID:
XP_028577176
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All DBs
Position
2:4706501..4735465
Genome browser
AA seq
1275 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDSARIWLSKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIYLHPDVDPKLQAKLKDIVKRHQGTVTEDKNNASHIVFP
VPGSLEEEEWVRPIMKRDKQVLLHWGYYPDSYDTWIPASEIEAPVEDAPTPEKPRKVHGK
WILDTDTFNEWMNEEDYEVNDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEPEDENMETAGKDEEENNAGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQSRQSDSDTKAGRKSKEIEDLVTETVKGKPELQTTASQQMLNFPDKSKEKP
PDMQNFGLRTDMYTKKNAPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKPDPAFGLESSGIAGTTSDELE
RIGEGGERGAFRASSREAPSMDLAQCAVGTKKGAETQETRAGLASGLELTLNRLAQEESC
TDENRAEPPSSEEKKEVKEPREGALEEEVKEKLGEVPRKEEEKSKEADGEKEMDKSDGDT
MADGEKEKEPKDGSEEGPKDLAEAEAERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHME
QLKYAEMRARQQHFQQMHQQQQQQPPPPPLSVGTQPLPPSGAPLAPAAHSMPIAQASVPA
TSTVGQPSSLAPAEQIGQPVAAQPQPAAAGAPQTGPGQTGQPSAGSHAQPPFPSQQPSSQ
ILPGAVPATVHPAMAGNIPSALPFGMPASIPFSMASNVTDSIGINFPANAPIHPVHGNLA
CSMANPPIVNIASTLHPPATPLPHGSAAAQSPAIVAAMQGSLLSNAGVGSDQGPSLQPDP
IAPSPSTATPVPPTQ
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggatggcggccccaacgtcaagtactacgaggcctcggacacc
gttagccagttcgacagcgcgcgcatctggctcagcaagaactacaagaagtacatccaa
gcagagccacctaccaataagtcgttgtccagcctagtagtacagctgctgcagttccaa
gaggaggtgtttggaaaacatgtcagcaatgcaccactcacaaagttaccgataaaatgc
ttcttagatttcaaagctggcggtgccctatgtcacatccttgcagcagcctataaattc
aagagcgatcaaggatggcggcgtttcgatttccagaatccatcacggatggaccgcaat
gtggagatgttcatgacgatcgaaaaatctctggtgcagaacaattgtctctcccgacct
aacatctatttgcatccagacgttgaccctaaattgcaggccaagctgaaagacattgtg
aaacggcaccagggaacagtaacagaagataagaacaatgcttcccatattgtcttccct
gtccctggtagccttgaagaagaagagtgggttcgcccgatcatgaagagagacaaacag
gtcctcctgcactggggctactaccctgacagctatgacacctggataccagcaagtgaa
attgaggcccccgtggaggacgcacccacaccagagaaaccccgcaaggttcatggcaaa
tggatcctggacacagacactttcaatgagtggatgaatgaagaagactatgaagtaaat
gatgagaagagccctgtctcccgcaggaagaaaatctctgccaagactctcactgatgag
gttaacagtcctgactcagaccgacgggataagaagggaggaaactataagaaaaggaag
cgttctccctctccttcacctactccagaagcaaaaaagaagaatgccaagaaaggacct
tccactccctacaccaaatccaagcgtggccaccgtgaagaagagcaagaagacctcact
aaagacatggatgagccttcccctgtccctaatgttgaagaagtcacactaccaaaaaca
gttaacaccaagaaagactctgaatcggctcctgtgaagggtggcaccatgaccgatttg
gatgagccagaagatgagaacatggagactgcaggcaaggatgaagaggagaacaatgct
ggaaacaaaggagagcagaccaagaaccctgacctacatgaagacaatgtcaccgaacag
acgcatcacatcatcatccccagctacgcagcctggtttgactataacagtgtccatgct
attgagcggagagccctcccggaatttttcaatggcaaaaacaagtcaaagactcctgaa
atctacttggcataccgcaatttcatgattgacacataccggctcaatccacaggagtac
ctaacctcgactgcctgccgtcggaacctggctggggatgtgtgtgccatcatgagagtc
cacgccttcctggaacaatggggactcattaattaccaagtggatgcagagagccggccg
acacccatgggaccaccacctacatctcatttccatgttctggctgacaccccttcggga
ttggtgccactgcagcccaaaacaccccagagtcgtcagagcgatagcgataccaaggct
ggacgaaagagcaaagagattgaagaccttgtcactgagacggtgaaggggaaacctgag
ctgcaaaccacagcttcccagcagatgctgaacttccctgacaagagcaaggagaagcca
ccagacatgcaaaactttgggcttcgcactgacatgtacaccaagaagaatgctccttcc
aagagcaaagctgctgccagtgctactcgtgagtggacagagcaggagacgctgctgctg
ctggaggctctggagatgtacaaggatgactggaacaaagtttctgagcacgttggcagc
cgcacgcaggacgagtgcattctgcatttcctgcgtcttcctatcgaggacccttacctg
gaggactcggaggcctctcttgggcctctggcctatcaacccattcccttcagccagtcg
ggcaaccccgtgatgagcaccgtggccttcttggcttctgttgtggaccctcgtgtggca
tccgcagcagccaagtcagcccttgaggagttctccaagatgaaggaggaggtccccaca
gccttggttgaagctcatgtccgcaaggtggaggaagctgccaaggtgacaggcaagcca
gacccggcatttggtctggagagcagcggaattgcagggaccacatccgatgagctggag
agaataggtgaggggggcgagcggggcgccttccgcgcttcatcccgtgaagcgccctcg
atggacctcgcccagtgtgcggtggggactaagaagggtgccgagacgcaggagaccaga
gccggcctggcttccggcctggagctcacactcaatcgcctggcgcaggaagagagctgc
acagatgagaaccgggcagaacctccgtcgtcagaagagaagaaagaggtgaaggaacca
agagaaggcgccctggaggaggaagtgaaggagaaacttggagaggtgcccaggaaagag
gaagagaaaagcaaagaggctgacggcgagaaggagatggacaagagtgacggggacacc
atggctgacggggaaaaggaaaaagaacccaaggatggtagtgaagaagggcccaaggat
ctggcggaggccgaggcagagcggaagaccaaagtggagagggacataggcgagggcaat
ctttccacggcggcggcagcagctttggcggcggcagcagtgaaggcgaagcacttggca
gctgtggaagagcggaagatcaagtctctggttgccttgctggtggagacacagatgaag
aagcttgagatcaagctaaggcactttgaggagctggagaccatcatggaccgggagcgc
gaggcactagagtaccagaggcagcagctcctggcggaccgacaggccttccacatggag
cagctcaagtatgccgagatgcgcgctcgccagcaacatttccagcagatgcaccaacag
cagcagcagcagccaccgccaccgcctctctctgtgggcacacagcccctccctccttca
ggggctcctctggcaccagctgcacactccatgcccatcgcccaggcttctgtgccggcc
accagcaccgtagggcagcccagcagtttggctccagcagaacagattgggcagccagtg
gctgctcagccacagcccgcagccgctggagctccacagacaggcccaggtcagactgga
cagccttctgcaggttctcatgcccagcctccgttccccagccagcagccatcctcccag
attctccctggggcagtcccagcaaccgttcaccctgccatggctggtaatatcccctca
gctctgcctttcggaatgcctgcctccatcccatttagcatggctagtaacgtaacagac
tccatcggcattaacttccctgctaacgcgcccatccatccagtgcatggtaaccttgcg
tgcagcatggctaatccgcccatcgtcaacatcgctagcaccctgcaccctcctgccacc
ccactgcctcacggttccgcagctgcccagagccccgctatcgtggcagccatgcagggc
agccttctttcaaatgctggtgttggatcagatcaagggccttcacttcagccggatccc
attgctcccagtcccagcacggccacaccagtcccgcccacacagtga
DBGET
integrated database retrieval system
