Podarcis muralis (common wall lizard): 114593452
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Entry
114593452 CDS
T06059
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04382
Cornified envelope formation
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04518
Integrin signaling
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114593452 (COL4A1)
04518 Integrin signaling
114593452 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114593452 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114593452 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114593452 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114593452 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114593452 (COL4A1)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114593452 (COL4A1)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114593452 (COL4A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114593452
NCBI-ProteinID:
XP_028577622
LinkDB
All DBs
Position
3:complement(60215..232026)
Genome browser
AA seq
1684 aa
AA seq
DB search
MGRPARDPPLALLLAALLLLPLLLLERRWAAEAAAAACSGCGKCDCSGVKGQKGERGLQG
LQGLVGFPGIQGPEGPPGPPGMKGDIGEPGLPGTKGTRGAPGPAGYPGNPGLPGIPGGDG
PPGPSGIPGCNGTKGERGPLGPQGLPGVPGNLGPPGPPGIKGDPGEVIGLIPDGVLKGEK
GFPGHPGLPGTPGSPGIAGPVGPPGPSGKPGSPGPPGPPGEKGHMGLSFQGPKGDKGERG
AMGPPGPQGTAPQQQEKGTVVIRGETGAPGEKGDPGSPGSPGLSEKGQKGEPGKPGPRGR
PGKDGENGEKGRTGETGPPGFPGLPGISGPKGDKGAAGPSGPPGIVIGIGDQEVIGEKGD
SGLPGIPGQKGEPGQKGFPGLPGAPGLPGQPSPGIIGAPGFPGERGEKGDRGSPGSSLPG
PKGRDGPPGLPGVPGLPGPPFATDGILECQPGQPGDPGPPGPRGQHGFLGERGEKGVKGD
GCFTCDVPSLAGEPGPQGFPGEPGVAGPKGAKGDRGLSGFEGLPGMTGPPGVPGLAGSPG
AKGEPGDVFFDSDLKGDKGDPGFPGPPGVPGREGRPGRDGLPGVPGLKGASGTIGLKGER
GLPGISGFPGPRGERGFPGSPGVGPSGPPGDKGDKGLSGIPGTPGFPGPKGEAGRVISLP
GSPGADGIPGPPGIQGIQGDKGDPGIPGRPGLPGEKGQTGPPGIGFPGAPGLPGFPGQSG
PPGVTGEKGEPGSPGLPGAQGSHGQKGEPGLGLPGPKGFPGPQGRDGLPGSKGDRGLPGI
PGEKGFPGVTGQPGSHGDPGPSGIPGLQGSPGLPGIGPPGPPGVPGQSGPPGPIGPPGSK
GERGYPGVPGLDMPGSKGDKGSQGSPGLPGLQGLPGLPGPQGQEGRPGAPGIKGEMGVMG
TPGSQGPPGPSGSSGAPGEKGDRGFPGAVGLRGDPGSKGEKGEAGLRGEPGKMDHVDMES
MKGQKGDKGSKGQLGPLGEKGTAGDPGTPGMPGKDGEPGLPGQAGPKGDQGPPGYQGEPG
APGQKGSMGEMGLPGPSGEKGVQGLPGEAGKHGLPGAKGVKGEKGQAGLPGIGFPGAPGE
KGDLGKTGIPGVPGEKGERGVPGIPGIPGSPGAKGLPGLQGSPGIPGIPGEKGGKGLPGL
DGFPGLKGEKGDLGPEGPPGAPGERGQPGHDGIPGSPGAKGDPGIPGRGLPGLPGAKGER
GAKGDVGSPGSPGSPGIPGTKGEAGFPGPQGPSGQPGVPGLPGKIGEGPKGDRGPQGRPG
LQGLPGPQGSPGAPGLQGVKGEKGSPGWPGTPGRPGLKGDQGQQGIPGNAGFPGAAGPKG
DMGPSGIPGPQGPKGSSGVPGLKGEQGDQGFPGAKGFPGPPGPPGPFQLLKGEPGEPGPV
GPVGPKGFPGPPGPKGQQGVTGPVGVTGLPGTPGFDGMPGQKGETGPAGPPGPRGFPGPP
GPEGMPGPMGPPGSPSVAHGFLVTRHSQSTEEPTCPSGTRLMFHGYSLLYVQGNERAHGQ
DLGTAGSCLRKFSTMPFLFCNINSVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFI
SRCAVCEASAMVMAVHSQTIQIPPCPEGWRSLWIGYSFVMHTSAGAEGSGQALASPGSCL
EEFRSAPFIECHGKGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLHSNVSRCQVC
MRRT
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccccgcgcgggatccgccgctcgcgctcctgctggctgcgctgctgctgctg
ccgctgctcctcctcgagcggcgctgggcggccgaagcggcggcggcggcttgttctggc
tgtggaaaatgtgactgtagtggagtaaaagggcaaaaaggtgaaagaggtttgcaaggt
ttacaaggtttggttggatttcctggaatacaaggacctgaaggtccccccggcccccca
ggaatgaagggtgatattggagaaccgggactaccaggaacaaaaggaacaagaggtgca
ccaggtccagctggctacccaggaaatcctggccttcctggcatccctggaggagacggc
cccccagggccttctggtatcccaggatgcaatggaacaaagggtgaaagaggtcctctt
ggtccccaaggtttacctggagtacccggaaatctagggcctccaggacctccaggaata
aagggagacccaggagaagttattggactgatacctgacggtgtgctaaaaggtgaaaaa
ggctttcctggtcaccctggattaccgggaacacctggttcaccaggtattgcgggccct
gttggaccacctggaccttctggaaaacctggttctccagggccaccaggccccccaggt
gagaagggtcatatgggtttaagcttccaaggaccaaagggtgataagggtgaacgaggt
gccatgggccctccaggtccccagggaactgctcctcaacagcaagagaaaggaaccgta
gtaatacgtggagagactggtgctcctggtgaaaagggtgaccctggctctccaggatca
ccaggattaagtgagaaagggcagaaaggtgaacctggaaaacctggtccacggggaaga
cctggaaaggacggagaaaatggagagaagggaagaactggagaaactggccccccggga
tttccaggactgcccggaataagtggtcctaaaggagataagggtgcagcaggtccttca
ggacctccaggaatagttatagggattggagatcaagaagtaataggtgagaaaggcgac
tcaggtcttccaggaattcctggacaaaaaggtgaaccaggtcaaaaaggttttccaggt
ctaccaggggcaccaggtctaccagggcaacccagtcctgggataataggggcacctggt
tttccgggcgagagaggagaaaagggtgaccgggggtctcctggatcttcattgcctggg
ccaaaaggaagagatggacctccaggacttcccggtgtaccagggcttccaggcccacct
tttgcaacagatggaattctggagtgccaacctgggcagcctggtgatccaggccctcct
gggcctcgtggccagcatggcttcttgggagaaaggggagaaaaaggggtaaaaggtgat
ggctgttttacctgtgatgtacccagcctagctggtgagccaggcccccaggggtttcca
ggagaaccaggtgttgcaggaccaaagggtgctaaaggtgacaggggcctttctggattt
gagggtcttccaggaatgacaggacctccgggtgtacctggactggcaggaagcccagga
gcaaaaggggaacctggagatgttttttttgactctgatttaaaaggtgataaaggagat
ccaggattccctggacctccaggtgttcctggaagagaaggaagaccagggcgggatggc
ctgccaggtgtcccaggtcttaaaggtgcatcgggaacaattgggttaaaaggagaacgt
ggcctcccaggaataagtggttttccaggaccccgtggagagagaggttttcctggttcc
ccaggggtcgggccctctgggccacctggtgataaaggggacaaaggtctttcagggatt
cccggcacaccaggatttccaggacccaaaggtgaagctggacgcgtcatttctctgcct
ggttctccaggagcagatggtattcctggcccccctggaattcagggcatccaaggtgac
aaaggagatccagggatcccaggaaggcctggcctgcctggtgaaaaaggccagacaggt
ccaccaggaatagggtttcctggcgcgccagggctcccaggttttcctggtcagtcaggt
ccaccaggtgtaactggagaaaagggagaacccggttctccagggttaccaggtgcacaa
gggtcacacggacaaaagggtgaacctggattaggtctcccaggccctaaaggttttcct
ggcccacaaggacgagatggccttcctggatcaaaaggtgatcgaggcttacctggcata
ccaggagaaaaaggatttccaggtgtgactggccagccaggatcccatggtgaccctggt
ccttctggaataccaggtctacagggctcccccggtttaccaggaataggccctcctggc
cctcctggggttccaggacaatctggtcctccgggaccaataggacctccaggaagcaaa
ggggaaagaggctacccgggtgttcctgggctagacatgccagggtccaaaggagataaa
ggtagccaaggatctccggggctgccaggattacaagggctgccaggcctgcctggccca
caaggacaagaagggcgccctggtgccccaggaatcaaaggagaaatgggagttatgggc
acacctggaagccagggtcctcctggtccttcaggatcttctggagctccaggtgaaaaa
ggtgacaggggttttcctggagctgtggggctcagaggtgatcctggctcaaagggtgaa
aagggtgaagctggtctacgaggagagccaggaaaaatggatcatgtagacatggaaagc
atgaaaggccaaaaaggagataaaggaagtaaaggacaactgggaccattaggagagaag
ggaactgcaggggatcctggcacaccaggaatgccagggaaggatggggagcctggtcta
cctggacaagcagggccaaaaggggaccaaggccctccaggataccagggtgaaccagga
gctcctggacagaaggggtccatgggagaaatgggtctcccaggaccatcaggagaaaag
ggtgtgcaaggccttcctggtgaggcagggaaacatgggttacctggagcaaaaggtgtg
aaaggtgaaaaagggcaggctgggcttccaggaattggcttccccggggctcctggtgag
aagggagacctgggaaagacaggtattcctggcgtgcctggagagaaaggtgaaagaggt
gttccaggaattccaggcatccctggctccccaggtgccaaagggctgccaggtcttcag
ggttctccaggtattccaggaatcccaggtgaaaaaggtggaaagggattaccaggctta
gatggttttcctggcttaaaaggagaaaaaggtgaccttgggcctgaaggtcccccagga
gctcctggagaaaggggccagccaggacacgatggaatcccaggctcacctggtgcaaag
ggtgacccaggtattcctggtagaggacttcctggacttccaggtgcaaagggagaacga
ggtgcaaaaggagatgtgggctcccctggctccccaggaagtccagggattcctggtaca
aagggagaagcaggatttcctggccctcagggtccttcaggccaaccaggtgttcctgga
ctgccaggcaaaattggagagggacctaagggtgaccggggacctcaaggccgacctggg
cttcaaggacttcctgggccacaaggctctccaggtgctccaggattacaaggagtcaaa
ggagaaaaaggaagcccaggatggccaggaacaccaggaagacctggactcaaaggtgac
caggggcagcaaggaatccctggcaatgctggctttccaggagctgctggcccaaaaggt
gacatggggccttctggaattccaggccctcaaggtccaaaaggttcttcaggcgttcct
ggactcaaaggagaacaaggtgaccaagggtttcccggagctaaaggttttccaggccca
ccaggtcctccaggccccttccagctcttgaaaggtgaaccaggtgaacctggccctgta
ggcccagtaggccctaagggatttcctggtcctccaggcccaaaaggccaacaaggtgtt
acgggacctgtgggtgtgactggtctcccaggcactccgggatttgatggaatgccaggt
cagaaaggagaaactggtcctgctggtcctccaggtcctagaggctttcctggcccacct
ggtcctgaaggcatgccagggccaatgggtccaccagggagtccctctgtagctcacggt
ttccttgtgaccaggcacagccaaagcacagaggagccaacatgcccatctggaacaaga
ctgatgttccacgggtattctttgctttatgtacaaggaaacgaacgggcccatggtcag
gacttgggcacagctgggagctgtctacgtaaattcagcacaatgcctttcctgttctgc
aacattaacagtgtatgcaattttgcctcaagaaatgattattcttactggttatctacc
cctgagccaatgccaatgagtatggctcctattacaggagacaacatcaggcctttcatc
agtcggtgtgctgtatgtgaagcttctgctatggtgatggcagttcacagtcaaacaatt
caaattccaccatgtccagaaggatggagatcactgtggataggctactcttttgtgatg
cacaccagtgctggtgcagaaggctctgggcaagctctggcatctccaggttcctgtctg
gaagagttccgcagtgctcccttcatagaatgccacggcaagggcacctgcaattattat
gcaaatgcttacagcttctggcttgccactattgagaggaatgaaatgttcaagaaacct
actccttccacactaaaagcaggagatctgcactcaaatgttagccgttgccaagtatgt
atgagaagaacatga
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integrated database retrieval system
