Podarcis muralis (common wall lizard): 114593454
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Entry
114593454 CDS
T06059
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04382
Cornified envelope formation
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114593454 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114593454 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114593454 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114593454 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114593454 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114593454 (COL4A2)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114593454 (COL4A2)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114593454 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114593454
NCBI-ProteinID:
XP_028577623
LinkDB
All DBs
Position
3:232083..427874
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AA seq
1718 aa
AA seq
DB search
MRRPPPLRVARPTGRVSQITLFLGLVLLLSGKVQAGGKSYTGPCAGRDCSWGCECFPEKG
ARGQPGLLGQQGFPGPPGVGGIPGLPGHKGYKGERGQPGITGPKGEAGQRGVTGFSGADG
IPGHPGQAGSRGKPGHDGCNGTKGDAGQQGGQGPGGLPGFFGIQGPKGQKGEPFVFTPEL
AVQFRGDTGDPGLRGFPGPQGAPGAVGIFGPVGNTGLPGPPGPPGSPGLQGNRGLGFYGE
KGDKGDIGPPGLPGRPSTGEFVTSTDVISSEYKGEKGIKGIRGEAGIPGHHSLSAEKGEE
GITGFTGQRGLPGINGLTGTEGDVGFPGPDGFPGIPGQKGTKGEPGDKGAQGPPAYAPYP
KLIKGARGDWGLPGAPGPEGDRGEQGSPGSAGPQGSSDDNSVGRGLPGEMGPKGLTGDPG
FAAVYPGPPGLDGDPGLQGSPGVPGPPGSPDTSVAVKGLPGFPGPPGNQGYPGPRGQKGL
KGEPGDCKCAESTERKRGPAGQPGPPGFPGPMGPVGRKGDPGDQGPHGVPGFLGSKGLPG
VPGPPGQQGPKGDSRYVTTRGAKGDQGIPGIPGYKGENGLPGRDGTDGLPGLPGLPGDGV
RGEPGDPGEPGPLGPKGFPGEEGLPGVGLPGPKGYPGPLGDPGVPGSPGFQGSPGPPGAP
AEIDCGQTVKVFFRGNRTEPIQSGTSCIQAPKGTPGTPGIPGPRGAKGTRGIAGELGLHG
SKGLKGSPGDQGREGLAGPPGFPGPRGNRGAPGLPGEQGFPGSPGLPGWPGPPGVKGVAG
DRLGAPTGPQGDAGPPGIPGLKGPPGDHGLPGLRGSDGIPGQPGAKGHPGSPGPAGLTGL
PGPQGPFGFPGLPGQQGITGRAGSPGFVGSPGARGDAGDPGKPGPVGMKGLAGDRGEPGF
IGTKGKAGEPGLPGVDGMHGLPGVKGAKGSSGIGGFKGAIGVRGWPGQNGIKGEAGFTGL
PGVRGLPGDSGLKGDRGDRGPPGSPPKIMPSMMLDVKGEKGNEGESGAQGSFGFKGTKGA
LGYPGQTGRPGSPGFPGYEKGQKGDYGIKGIKGISGYIGVSGGRGISGFPGATGRRGEKG
IPGIDGIFGESGQPGEIGDWGDTINLPGRAGSKGDAGITGAKGVEGAKGGKGDAGVPGFP
GIQGMRGSPGSPGLQGQRGFPGQVGEQGLSGDPGFPGSSGEKGSSGWIGLPGSKGAAGAR
GITGLHGLPSTKGFPGSPGPDGYGPPGFPGIWGDKGTVGEPSPIEGSRGAPGPKGERGDL
GQRGSPGSPGPEGRPGLPGVSNISGAPGDVGSPGLDGVPGYPGPPGPPGIAAPPGSKGEV
GQIGIIGEDGSKGLRGDHGADGRPGIPGFPGAKGYKGEQGVMGFVGILGTPGDFGPTGPK
GDRGFPGFQGPPGSPGLPPVLPKLVSEQGSPGAPGNRGLPGTLGEMGPQGPPGSPGSRGP
MGKQGLQGRGGIPAAPGFRGDQGRTGLQGPGGFEGAAGDPGTPGLPGMPGRSINMGYLLV
KHSQADQEPMCPVGMSKLWSGYSLLYFEGQDKAHNQDLGLAGSCLTRFSTMPFLYCNPGD
VCYYASRNDKSYWLSTTAPLPMMPVQEEEIRPYISRCSVCEAPAVAIAIHSQDATIPHCP
EGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAQGTCHYFANKYS
FWLTTIDNQFQHSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccccccgccgctgcgcgtcgcccgccccactggccgggtttcacaaatcacg
ctctttctgggattggtgctgctgcttagtggtaaggtgcaagctggagggaagtcttat
acaggaccttgtgcaggaagagactgcagttggggttgtgaatgtttcccagaaaaagga
gctcgtggccaaccaggacttcttgggcagcagggattcccagggccgcctggagtggga
ggtatcccaggacttccagggcacaaaggatataaaggcgaaagaggccagccaggaata
actggaccaaagggagaagcgggacaaagaggggtcactggtttttctggtgcagatggc
attcctggtcatccgggtcaagcaggatcaaggggcaaaccaggccatgatggctgtaat
gggaccaagggggacgctggtcagcagggaggccagggacctggaggcttgcccggattc
tttggaatccaaggacccaaaggtcagaagggagagccctttgtttttactccggaatta
gctgtgcagttcaggggagacactggtgacccaggtttgaggggcttcccgggacctcag
ggtgctcctggtgcagtgggtatatttggtccagttggaaacacaggtctacctggacct
ccagggccaccaggatctccaggacttcagggcaacagaggccttggcttttatggagaa
aagggtgacaagggtgatattgggccccctggtctacctgggcgtccatcaacaggagag
tttgtcacttcaacagatgtaatttcaagtgaatataagggtgagaaaggaataaaagga
attaggggagaagctggaattccgggtcatcattcactttcagcagaaaagggagaggaa
ggaataacaggctttacaggacaaagaggtttgccgggaatcaacggtctcactggaaca
gaaggggatgtgggtttcccaggacctgatggcttccctggcatacctggtcaaaaagga
actaagggagagccaggagacaaaggtgctcaaggaccaccagcttatgctccatatccc
aaactaataaaaggtgcaagaggtgactggggactccctggtgctcctgggcccgagggt
gaccggggcgagcaaggcagtcctggaagtgctggtccacaaggatcatcagatgataac
tctgtgggaagaggtttgcctggagaaatgggccccaaaggcctgactggcgatccaggt
ttcgcagctgtttatccaggtcctccaggattagatggcgatcctggattacaaggatca
ccaggtgtccctggccctccaggaagtccagatacttctgttgcagtgaagggtcttcca
gggtttcctggtcctccaggaaaccaaggttacccaggaccacgagggcaaaaggggttg
aaaggagagccaggagattgtaaatgtgctgaaagtaccgaacgaaaaagaggccctgct
gggcaacctggtccaccaggatttccaggtccaatggggccggtggggagaaaaggagac
cctggtgatcaaggcccacatggagtgcctggctttcttggctcaaaaggattgcctggt
gtacctgggccacctggacaacaagggccaaaaggagattcgcgatatgttaccacaaga
ggtgctaaaggagaccaaggaattccagggattcctggatataaaggagaaaatggtttg
ccaggaagagacggcacagatggtttaccaggactacctgggcttccgggtgatggtgta
cgaggtgaaccaggggatcctggtgaacctggtccgttaggcccaaagggttttcccgga
gaagaaggcttgccaggtgttggcttgccaggcccaaagggatatcctggccctctgggt
gaccctggggttcctgggagtcctggcttccaaggttccccaggacctccaggcgctcct
gctgaaatagattgtggacagacagtcaaagtctttttcagaggtaacagaactgagcca
attcagtcaggaactagctgtattcaagcaccaaaaggaactccaggaactccagggatt
ccaggaccaagaggtgcaaaaggtacaagagggattgcaggcgaactcggtctgcatgga
tccaaagggctgaaaggctctccgggagatcaaggtcgtgagggcttagcaggcccacca
ggatttcctgggcccagaggaaacagaggtgcaccaggtttgcctggggagcagggcttt
cctgggagtccaggattgccaggttggccaggccctccaggagtgaaaggagttgcaggt
gacagacttggagcacccacaggcccccaaggggatgctgggccgccgggaatcccagga
ctgaaaggccccccaggagatcacggcttgccaggactgagaggaagtgatggcattcca
ggtcagcctggagctaaagggcatcctgggtctcctggccctgctggcttgactggtttg
ccaggaccacaaggaccatttggattccctggactgccaggccagcaagggatcacgggc
agagctggctcaccagggtttgtaggctcaccgggtgccagaggagatgcaggagaccca
gggaaacctggtcctgtaggcatgaaaggtctggcaggtgacagaggtgaacctggtttc
attggaactaaaggcaaggctggtgagcctggtctcccgggggtggatggaatgcacggt
cttccaggtgtgaaaggtgctaaaggttcctctggaattggaggtttcaaaggtgcgata
ggcgtcagagggtggccagggcagaacggaatcaaaggagaggctggcttcactggcttg
ccaggggttcgaggtttacctggtgactcgggattgaaaggtgaccgtggtgaccgtggc
ccaccaggatcacctcctaaaatcatgccaagtatgatgcttgatgtgaaaggcgaaaag
ggaaatgaaggagaaagtggtgcccaagggagctttggtttcaaaggcacaaaaggagca
ctaggctaccctgggcagacaggaaggccaggttcacctggctttccaggttatgaaaaa
ggtcagaaaggtgactatggaattaaaggaataaaaggcatatcaggatatataggtgtc
tcaggaggtcgtggtatttctggtttccctggagcaacgggaaggaggggggaaaaggga
attccagggattgatggtatttttggcgaaagtggccagcctggggaaattggtgattgg
ggagatactataaacttgccaggaagagcaggttcgaaaggagatgctggcataactgga
gccaaaggggtagaaggagccaaaggaggaaaaggtgatgctggtgttccaggttttcct
ggcattcagggcatgaggggctccccaggctcccctgggttgcaagggcaaagaggattc
ccagggcaggttggcgaacaaggtttatctggagatccaggatttcctggatcatcaggt
gaaaaaggaagttctgggtggattgggcttccagggagtaaaggtgctgctggcgccaga
ggaatcactggattacatggtttgccaagtaccaagggctttccaggatcaccaggtcca
gatggatatggcccaccaggtttcccaggtatttggggtgacaaaggtaccgtgggagag
ccaagcccaattgaaggcagcagaggagctcctggtccgaaaggagaaagaggagatcta
ggacagagaggctcacctgggagccctggacctgagggaagaccaggccttcctggagtt
tcaaacatatctggagcacctggtgatgtgggatcaccaggtttggatggtgtgccaggc
tacccaggaccaccaggaccaccaggaatagctgctccacctggaagcaaaggagaagtg
gggcagatcggcataattggagaagatggttcaaaaggacttagaggagaccatggcgca
gatgggagacctggaattccagggttccctggggcaaaaggatataaaggggaacaagga
gtcatgggttttgttggcatattgggaacgcctggtgactttggccccactggacccaaa
ggagaccgaggatttcctggatttcagggacctccaggttcccctggactgcctcctgtc
cttcctaaactggtttcagaacaagggagcccaggtgctcctggaaacagagggcttcct
ggcacgttgggtgagatgggtcctcaaggcccaccaggatctccaggttctagaggcccc
atgggtaaacaaggtctgcaaggaagagggggaatacctgcagctccaggcttcagaggt
gatcaagggagaacaggactgcagggcccagggggctttgaaggtgcagcaggtgatcca
ggtactcctgggctgccaggtatgcccggccgcagcatcaatatgggatatcttttggtg
aagcacagccaggcggatcaagagcccatgtgtccagtgggcatgagcaaactctggagt
ggatacagcttgctctactttgaaggacaagataaggcacacaatcaggatctaggtcta
gctggttcatgtttgactcgattcagcactatgccttttctttactgcaatcctggggac
gtctgctattatgcaagtcgcaatgataagtcttattggctctcaacaacagcccctctt
ccaatgatgcctgtacaagaagaagaaatccgaccttatatcagccgttgctccgtctgt
gaagcgccggctgttgccatagccattcacagccaagatgccactattccacactgtcct
gaaggatggcgcagcttgtggatcggctattccttcctcatgcacactgcagctggtgcc
gaaggtggtggacagtcactcgtgtctccaggtagctgtttggaagacttccgagcaaca
ccattcatcgaatgcaacggtgctcagggaacctgccactactttgcaaacaaatacagt
ttctggcttaccacaattgacaatcaatttcaacactccccttcagcagatacactcaag
gctggactcatccgaacacacatcagccgatgccaagtgtgtatgaaaaatttgtaa
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integrated database retrieval system
