Podarcis muralis (common wall lizard): 114593813
Help
Entry
114593813 CDS
T06059
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmua03041
]
114593813 (DDX1)
03016 Transfer RNA biogenesis [BR:
pmua03016
]
114593813 (DDX1)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114593813 (DDX1)
Spliceosome [BR:
pmua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114593813 (DDX1)
Transfer RNA biogenesis [BR:
pmua03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
114593813 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
114593813
NCBI-ProteinID:
XP_028578402
UniProt:
A0A670I3F6
LinkDB
All DBs
Position
3:31324745..31343645
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCRDQGLCRVGWSSMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYVDVDKGQIMFSKNGKDLGLAFEIPQHLKNQALFAACVLKNAELKF
NFGEEDFKFPPKDGFVALDKAPEGNSVKSQHAGSAQVAQTKNQPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLT
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKNDKYWEKIGKNHIRTDEVHAKDNTRPGTN
SAEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFMQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHSCPSRGKGCYNTRLKDEGGCTIWYNEMQLLG
EVEEHLNCTISQVEPDIKVPVDDFDGKVTYGKRRAAGGGSYKGHVDILAPTVQELASLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttcagagatgggtgtgatgccagaaattgctcaagctgtggaagagatg
gactggttgcttcctacagatatccaagcagagtccatcccgttaattttaggaggtggt
gatgtacttatggctgcagaaactggtagtggaaaaactggtgcattcagcatcccagtt
attcagattgtttatgaaactcttaaggaccaacaggaaggcaaaaaaggaaaaaccact
ataaaaactggtggaggagtgctcaacaaatggcaaatgaatccatatgacagaggatct
gcttttgctattgggtctgatggtctgtgctgccaaagcagggagatcaaagaatggcat
ggatgccgatcaacaaaaggcgtgactaaagggaaatattattatgaagtatcctgtcgt
gaccagggtttatgcagagtcgggtggtcctctatgcaagcgtcattagatttgggtact
gacaagtttggctttggctatggtggaactggaaagaaatcccataacaaacagtttgat
agttatggggaggaattcactatgcatgacacaatcggctgttatgtagatgttgataaa
gggcaaatcatgttctccaaaaatggcaaggaccttggacttgcatttgaaatcccacag
cacttaaagaaccaagcactctttgcagcctgtgtcctcaagaacgctgaattgaaattc
aacttcggcgaagaagactttaaatttccacccaaagacggcttcgttgctcttgataag
gctcccgagggcaactctgtgaaatcccagcatgcaggaagtgcgcaagtagcacaaaca
aagaatcagccgaatgctcccaaagccttgattgtggagccttccagggaactggcagag
cagactctgaacaacgtgaaacaattcaaaaaatacgtggataatcctaaattaagggaa
ctcctaattattggtggagttgctgcaagagagcaactttctgtattggagcaaggggta
gacatagttgtgggaactcctggaagactagacgatcttgtgtcaaccggaaaactgact
ttatcgcaagttaggttcctggttcttgatgaggctgatggccttctcagccaggggtat
tccgatttcataaacagaattcattctcagattcctcaaataacttcagatgggaagagg
ctgcaggtgattgtgtgttctgcaactctgcattcgtttgatgtgaagaaattatctgaa
aagatcatgcacttccccacttgggtagatttgaaaggagaggattctgtcccagataca
gtgcaccatgttgttgtccctgtaaatcccaaaaatgacaaatactgggaaaagattggt
aaaaatcatatcaggactgatgaggtgcatgcaaaggacaatacaagacctggtactaat
tctgcagaaatgtggtcagaagcgattaagattttaaaaggagaatacactgtccgggcc
attaaggaacacaagatggatcaagcaataatcttctgcagaaccaagatagattgtgat
aacatggagcaatacttcatgcagcaaggaggaggtccagataggaaaggacatcagttc
tcatgtgtctgcttgcatggtgacagaaagcctcatgaaagaaaacagaatttggagcgc
tttaagaaaggagatgtcagattcttgatctgcactgacgttgccgctagaggaattgat
atctctggtgttccttatgttatcaacgtcacacttccagatgaaaaacagaactacgtt
catcggattggcagagtgggaagagctgaacggatgggtctggctatttctcttgtggca
acagaaaaagaaaaggtttggtatcactcatgccccagtcgaggaaaaggttgctataac
actcgactgaaggatgagggtggttgcaccatttggtacaatgagatgcagctgctgggc
gaggtagaagagcatctgaattgtaccatttcgcaggttgagccagatataaaagtccca
gtagatgattttgatggtaaagtcacctatgggaaaaggagagctgctggaggtggatcc
tataaaggccatgtggatattctggcacctacagtacaagagttggcatcccttgaaaag
gaggcacagacctctttcctgcaccttggttaccttcccaatcaactgtttagaacattt
tga
DBGET
integrated database retrieval system
