Podarcis muralis (common wall lizard): 114593980
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Entry
114593980 CDS
T06059
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04140
Autophagy - animal
pmua04142
Lysosome biogenesis
pmua04145
Phagocytosis
pmua04148
Efferocytosis
pmua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
114593980 (VPS18)
04142 Lysosome biogenesis
114593980 (VPS18)
04140 Autophagy - animal
114593980 (VPS18)
04148 Efferocytosis
114593980 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114593980 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmua04131
]
114593980 (VPS18)
Membrane trafficking [BR:
pmua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114593980 (VPS18)
Hops complex
114593980 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_Vps41
zf-RING_16
zf-RING_UBOX
zf-RING_11
zf-RING_2
zf-ANAPC11
aq_1631
zf_RING_Vps8
DUF8221
DUF5600
zf-rbx1
STX17_N
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
114593980
NCBI-ProteinID:
XP_028578861
UniProt:
A0A670K3L6
LinkDB
All DBs
Position
1:43956789..43968624
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDQYVDSLSHSASSQQNRASLGIPHTGYVNARLEKETPIFNKQRIDFNPPEKINSL
VVSSNQLCMSLGKDIIFRLDLAKADEPNQVELGRKDEARVHKLFLDHTGSHLIIALNTSE
CLYLNRSAQKVRILSRWKGHLIESVGWNKFLGSEMNTGPILVGTSQGQIYEAEVSVSEGS
LFGTNPDQYFRQIYNLEEEAGPAPVCCLEIERGIDGKCFIIATTRKRLFQFVGKIPEGSE
QQAFGAIFSMPADHLPGFREFPASLGYSEIAFYTPKLRSTPSAFAWMMGNGVLYGSLDYG
RPDSMLSDEQVWEYPSDVDAVANKPMNIVLTQFHFLLLFPDRVKAVCTLNGQVVFQDVFL
EKFGSLKRMIKDPAFGQIWIHTEKAVFRYNVQRESRDVWKMYTNINKFDLAKEYCKDRPE
CLDIVLAKEAEYCFQNRRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLASL
KPSEKTQTTLLTTWLTELYLNRLGVLEADTSKRDLYEKTRDKFRSFLGSPKNKDCLFNNR
ATIHELLASHGDTEHMVYFAVIMHDYERVIAHYCQHENYNEALEVLSKIRDDVLFYKFSP
VLIQHIPKKLVDAWIEMGKKLDAKNLIPALVNYSQSGSTEQINEAIRYMEFCVSELKETQ
QAIHNYLLSLYALCRPDSLLSYLERAGTYADNIHYDLKYALRLCAEHGHHRACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQAKLEDLQK
KLSATSQPSKSHHRPKDTDTSSQGKGQLSREQMKADIDDIVAAECVYCGELMIRSIDKPF
IDPQRYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttccattctggaccagtacgtggactcgctttcgcactcggcttcctcgcagcag
aaccgcgccagcctgggcatcccgcacacggggtatgtgaatgctcgcctagaaaaagag
accccaatttttaacaaacagaggattgatttcaacccccctgaaaagattaatagcctg
gttgtctcttcaaaccagctgtgtatgagtcttggaaaagacatcatttttaggcttgac
ctggccaaggcagatgagcctaaccaggtagagcttggacgaaaggatgaagccagagtt
cacaagctctttttggaccacacaggttctcaccttatcattgccctgaacaccagtgag
tgcctctatttgaaccgaagtgctcagaaggtgcggatcctgtcacgctggaaaggtcat
ttgattgaaagtgtgggctggaacaagttccttggctcggagatgaacacgggccccatt
ttggtgggaacatcccaaggccagatatacgaggctgaagtctcggtcagtgaaggcagt
ctcttcggcactaaccctgaccagtatttccgccagatctataacctagaagaggaggca
ggacctgccccagtctgctgcctcgagatagaacgaggaattgatgggaagtgctttatc
attgccactactcgtaagaggcttttccagtttgttggcaagattccagagggatctgaa
cagcaagcctttggagcaatatttagcatgcctgcagatcacctgcctggcttccgcgag
tttccagctagccttggctacagcgaaattgcattttatactcctaagcttcgctccacc
cccagtgcttttgcttggatgatgggcaacggtgtcctgtacggatcactggactacgga
cgtcccgactctatgcttagcgatgagcaggtctgggaatatccatctgacgtagacgcg
gtagccaacaaacccatgaatatagtgctcacgcagtttcattttctgctgctgtttccc
gacagagtgaaggctgtgtgtaccctgaatgggcaagttgtcttccaggatgtgttcttg
gaaaagtttggctcgctgaagcgtatgatcaaagaccccgcgtttgggcaaatctggatc
cacacagaaaaggccgtgtttcgatacaacgtgcagcgagagtcccgtgacgtgtggaag
atgtatacgaacatcaacaagtttgatctggctaaagagtactgcaaggaccgccctgag
tgcttggatatcgtgctggccaaggaggccgaatattgcttccaaaacaggagatacctg
gacagtgcaaagtgttacgcattgactcaaaattactttgaggagattgcgcttaaattt
atcgaagccaagcaggaagaggcgctgatggagtttctgattaagaaactggctagcttg
aagccttcggaaaagactcagacaaccctgctgaccacgtggctgacggagctgtactta
aaccgccttggagtcctggaagcagacacatccaaacgggacctctacgagaagacgcgg
gacaagttccgcagcttcttgggcagccccaaaaacaaagactgcctgttcaacaaccga
gcaaccattcacgagctgctggcaagccacggggacacggaacacatggtgtactttgcc
gtcataatgcacgactacgaacgggtgatagcccattactgccagcatgagaattacaac
gaagctctggaagtcctgtccaaaatccgggacgacgtgctcttctacaagttttctcca
gtcttgatccagcacatccccaagaagctggtggatgcttggatcgaaatggggaagaag
ctggatgccaagaacctcatccctgcccttgtcaactacagccagagtgggagcaccgag
cagatcaacgaagccattcgatacatggagttctgtgtgagtgaactgaaggagactcag
caggccattcacaattacctcttgtcgctctatgctctgtgtcgccctgactcgcttctg
tcgtatctggaacgcgctggaacttacgccgacaacatccactatgacctgaagtacgca
cttcggctctgtgcagaacacggccaccaccgggcttgtgtccacgtgtacaaagttatg
gagatgtacgaggaagctgtggatctcgctttgcaggtggatgtagatatggcaaagtcc
tgtgcagacctccctgaagacgatgaggagctgaggaagaagctttggctgaagatcgcg
cgacatgttgtccaggaagagaaggatgtcaagaaggccatggcctgcctttccagctgc
aacctgctgaagattgaagatgtcctgccgttctttccagactttgtcaccatcgatcac
ttcaaggaagccatctgcaactctctagaagcctacaacaagcacatagaggagttgaag
acggagatggaggaagccacacagagtgccaaaaggatccgggaagacattcaggaaatg
aggaacaaatatggctctgtggaaccccaggagaaatgtgcggcatgtgacttcccgctc
ctgaaccgccccttctacctcttcctctgtgggcacatgttccactacgattgccttctg
caggcagtttatccaaacttgcctgcctacaagcaggctaaactggaagaccttcaaaag
aagctctcggccacaagccagccctccaaatcccaccaccggcctaaggacaccgatact
tctagccaaggaaagggacagttaagccgtgagcagatgaaagctgacattgatgatatt
gtggcagctgaatgtgtgtattgtggagagctgatgatccggtccattgacaagcctttc
attgatccacagaggtatgaagaggagatgcagagctggctgtaa
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