Podarcis muralis (common wall lizard): 114594164
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Entry
114594164 CDS
T06059
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114594164 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114594164 (HBS1L)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114594164 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
114594164
NCBI-ProteinID:
XP_028579314
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Position
3:complement(60694875..60739954)
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AA seq
848 aa
AA seq
DB search
MARHRNVRGYNYDEDFEEDDLYGQSVEDDFCISPSTAAQFIYSRRDNPTAYAETLEEKYD
YETEHSNDCIPSHQLTGAEKAKLDLCLDHMREVLGKSVPEKVMVEAVLSSKFDVQQALDS
VLAQDNKQNKIKNEDAVIAGKATKGLFCSEIFSSTNNLTNSIENTLDTTKSCCSLSNPVV
NFESCNASAPGDKTVFRPKYVKAPSVKKKKSFCNSSGALPIPFSDNDKSLYKPLNKQVSL
PPTDSTSTSWKSCNESDACFSSEAELLKENSSENVSWNPSEFEGVDLKGLVRLNETGDSA
DAQDSALIFLQKNYRKVRDSQTSRIESDVVPKVTKMTVSGKRQTTGFEVPCVNAEENGHM
PQKGLSAGDANVGVTEILPKPAFPPQTVQVSEEPTLTPTSVKKSGKAKQQIDVKAELEKR
QGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLD
ETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAMADVAILVVDASRG
EFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEIVSKLGQFLKQAGF
KESDVAYIPTSGLGGENLVTRSQASELTKWYEGKCLLEQIDSFKPPQRSVEKPFRLCVSD
VFKDQGSGFCVTGKIEAGYVQVGDRLLAMPPNETCTVKGIALHDEPVDWAAAGDHVILTL
TGMDIIKINVACIFCCPKEPIKACTRFRARILIFNIEVPITKGFPVLLHFQTVSEPATIR
RLLSVLHKSTGEVTKKKPECLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTI
AAGVVTEV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtgcgtggctataactacgacgaagactttgaagaagatgat
ctttatggacagtctgtagaggatgatttttgcatttcaccttcaacagctgctcaattc
atttactcaagacgtgataatcctactgcatatgccgagacattagaagaaaaatatgat
tatgaaacagaacatagcaatgattgtattccaagtcaccagctaacaggtgctgaaaaa
gctaagcttgatttgtgccttgatcacatgagagaagtgcttggaaagtctgtgcctgag
aaagtgatggtggaagcagtattgagcagtaaatttgatgtacaacaagctttggattct
gttcttgcccaagacaataagcaaaataagataaagaacgaggatgccgtaattgcaggg
aaggcaacaaaaggcttattttgctcagaaatattttctagcactaacaacttgactaac
tccattgaaaatactttagataccactaagtcctgctgtagtctcagcaaccctgtggtc
aattttgaatcttgtaacgcttcagctccaggtgacaaaacagtcttcagacccaaatat
gttaaagcaccttcagtaaaaaagaaaaaatctttttgtaactcctcaggagctcttcct
ataccattcagtgacaatgataagtcactttataaaccactgaacaagcaggtatcactc
ccaccaactgacagcaccagcacaagttggaaatcttgcaatgaaagtgatgcatgcttt
agttcagaggctgaattgctgaaggaaaattcttcagaaaatgtgtcttggaacccatct
gaatttgaaggagttgacttgaagggcctggtcaggcttaacgaaacaggtgattcagca
gatgcccaagatagtgcactaatttttctccagaaaaactacagaaaagtcagagattcc
cagacaagcagaattgaatctgatgtcgtgccaaaagttaccaaaatgactgtgtctgga
aagagacaaactaccggctttgaagttccatgtgtgaatgctgaagagaatgggcatatg
ccacaaaagggactctcagctggagatgccaacgtgggggttactgagattcttcctaaa
ccagcttttccaccccagactgttcaagtatcagaagaaccaaccttgacaccaacttca
gtgaaaaagtccggaaaagcaaaacagcaaatagatgtgaaagctgagctggagaagaga
caaggaggaaaacatctacttaaccttgtggtaataggacatgttgatgcaggaaaaagt
accctcatgggtcatttgctgtatcttctgggcaatgtgaacaaacgaactatgcacaaa
tatgagcaagaatcaaagaaagctggaaaggcatcatttgcttatgcatgggtcttggat
gagacaggggaagagagagagaggggagtgacaatggatgtaggtatgaccaaatttgag
acaaagacaaaagttattacattgatggatgctcctggccataaagacttcattccaaat
atgatcacaggagctgcaatggctgatgtggctatattagtggtggatgccagcagaggg
gagtttgaagcaggatttgagactggtgggcaaacacgagaacatggactgttggttcga
tctcttggagtcacacagctggcagttgctgtcaataaaatggaccaggtcaattggcaa
caggaaagatttcaggagattgtcagtaagcttgggcagttcctgaagcaagctggcttt
aaggagtcggacgtagcttatatacctacaagtgggcttggtggtgaaaatcttgtcaca
agaagtcaagcgagtgagctgaccaaatggtatgaaggaaaatgcttgttagaacaaata
gattctttcaagccacctcagagatctgtggagaaaccattcagattatgtgtatcggat
gtttttaaagatcaaggatcgggattttgtgtgactggtaaaattgaagcaggatatgtt
caagttggagatcggctgctagcgatgcctccgaatgaaacttgcactgtaaaaggaatt
gccctacatgatgaaccagtggattgggctgcagcaggagatcacgttattctcactttg
actggcatggatatcatcaaaatcaatgttgcgtgcatattttgttgccccaaggaacct
attaaagcttgcacacgtttcagagctcggatcctcatcttcaatattgaagttcctatc
accaaaggattccctgtgcttttacattttcaaactgtaagcgagcctgccactattagg
aggttactgagtgtgcttcacaagagtacaggtgaagtcacaaagaaaaaacctgagtgt
ttgactaaaggacagaatgctttagtagaactgcaaacgcaaaggcctgttgctctggaa
ctttataaagacttcaaagaacttggaaggttcatgttgcggtacagtggctccaccata
gctgcaggagttgtgacggaggtatag
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