Podarcis muralis (common wall lizard): 114594399
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Entry
114594399 CDS
T06059
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmua03016
]
114594399 (TARBP1)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114594399 (TARBP1)
Enzymes [BR:
pmua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
114594399 (TARBP1)
Transfer RNA biogenesis [BR:
pmua03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114594399 (TARBP1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114594399 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
114594399
NCBI-ProteinID:
XP_028579878
LinkDB
All DBs
Position
3:complement(76984744..77014985)
Genome browser
AA seq
1597 aa
AA seq
DB search
MDAVLADTLLSQCPDWGALLRAVCGGGAEGGPLSVEQAETLRFLLERVAAGGRNDERDAA
ARRVAWEAALGRCLPVLLGGASLPGESPEERLRLARAACGALRCCASLGGAPLAERLARE
SLEALEGSAGSGRLQVEAAVEVLAAVAPWLEEPALLGRAVAAALKLLRGDGEDDEEEKAL
LAAGRLLPALGRNSAALGLVWEGLVVLPPPPKGAPQRVSRTLLVLSALSDALFPASAQVE
AAAQLLDARQCSSFWEVVQKGLTESDALCRKRARYLLKRAVDVSDKLRLECRCNRHSGNE
PCLFWWCAEKNDQLIQFWENYILIMETLEGNQIHVIKPVLPKLNSLYEHAVSEQNDSWVF
HPSWHMCIYKRMFESENKTLTKEGVIHFLDIWQTKHIPMSPGFSEFIIGPLMDALSESSL
YSRLSGQIIGTCPPLGMKLQMFLATFFTSLPEKEKSSFLLKFIQKMSNRHWCAVPILFLS
MALANIPAYRVLDTEGLLALRDVLQCTMITHQILLRGAAQCYLLKAAILLTDVEKVSLSD
IANFIVSLKPEESLGRGTVLWTMLCNWLRVNDKHFRKPLNCNVPQDKTALSVYAQSLVED
YLKTPIANSAEDCLMPDWFEAKLVATMILLTADVEEMKHVYSVNGSTERIELKALLNPLL
DVLLKLGTNPYISSLKTDKSLQLLLKLLQTCSIKCSSPQVDGIIAVLQNSFMTATESILD
FLLRRLTANELNTISDLQRCNLYLEVLSELMNICSVNGWKKGPSICSFISSLINTSLCSV
QEGNSEKEVKLGEQIQKVVSMASLSVICEIIDQKPDLQLESLPAVETLKTTISCAQLNHV
LKKPCSMEKDSYLEEPASHQGWGKIVACYIHDQWVCLHFVLNNYQKLSKDKYIEHFLPDV
QKCTRILQSALEAVTILPSDHILPVFHSMKIVVSKLLESSESLCIEAFDLAWKIIFALSN
TQLIFWPNLKAFVQFVFDPEILAAAAKNKSQAYTRIKEIIFQMIEMSSTRTGVFNMLLTY
CCQSWLFPTSDDPNAVEKAFSNASNYSELVVEACLFGTVFRRDQRLVQEVCAFIENLGDE
CAANVVTESTNRDDHYVRVCAIKFLCLLDETNTLHKKFIEDFVMKLLDRGELISKSKNRY
YVNSLQHRIKNRLWQTLLVLFPKLHEDILTRTIDRILQAGHSNNQASVKYLIEWNIILIL
HKFPHFLQKFWDCFNYGEDQLKTSICTFLAVMSHFDVILQNISEKTPALKKALVVVLQWC
FHHNFSVRLYALIALKKIWGMCKALCVEDFEALAPVIECSLNQAESMHGTGNAKKNWQRI
QKHFFFENFHPLKDYCVETIFYTLPHLSEIAEEELISLSKFKAFTDIPLSSTFPFSHSRT
SLLDLKQCDWSQQDLGLSSAESSSQRQWTDVQKKIIPWKDSTPDLELVFQDRATKLGKAN
NKLIVVASLIDKPTNLGGLCRTCEIFGVSALIVGSLHYINDKQFQYLSVSAEQWLSLIEV
KPFQLADYLEQKKMEGYTIIGVEQTAKSCDLTEYCFPEKSLLLLGNEHEGIPANLIQQLD
TCVEIPQQGVIRSLNVHVSGALLIWEYIRQQIVKGKE
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtcttagctgacacgctgctctcgcaatgtccggactggggcgcgctgctg
cgggccgtgtgcggcggtggcgccgaaggcgggccgctctccgtcgagcaagcggagacg
ctgcgcttccttctcgagcgtgtggcggcgggcgggcggaacgacgagcgggacgcggcg
gctcggcgcgtggcctgggaggcggcgctgggccgctgcctgccggtgctgctcggcggc
gcctccttgccgggggagtccccggaggagcggctgcgcctggccagagccgcgtgcggg
gcgctgcgctgctgcgcctcgcttggcggagcccctttggcggagcggctggcgcgggag
tcgctggaggccctggaaggcagcgcggggagcgggcggctgcaggtggaagcggccgtc
gaggtcctggccgccgtggccccttggctggaggagccggcgctgctcgggcgagccgtg
gcggcagccctgaagctgctgaggggagatggagaggacgacgaggaggagaaagccttg
ctggcggccgggaggctgctgccggcgctggggcggaatagcgccgcattggggctcgtg
tgggaagggctggtggtgctgccgccgccgcccaagggtgccccgcagcgggtgagccgg
accctgctggtcttgagcgccctctcggacgcgctctttcctgcgagcgcgcaggtggag
gcggctgctcagctactcgacgccaggcagtgcagcagtttctgggaagtggtgcaaaag
gggctgacggagagcgatgccctgtgcaggaaaagagcccggtatttgctgaagcgagca
gtggatgtctctgataaactacgcctggagtgcaggtgcaaccggcacagtggaaatgaa
ccatgtctgttctggtggtgtgcagaaaaaaatgatcaacttattcagttttgggaaaat
tacatcttaattatggagactttggaaggaaatcagatacatgttataaagccagtattg
ccaaagttaaatagtttatatgaacatgcagtatcagagcaaaatgatagttgggtgttt
cacccatcgtggcatatgtgcatttacaaaagaatgtttgagagtgaaaacaaaacattg
acaaaggaaggtgtaattcattttcttgacatctggcaaacgaaacatatccctatgtca
ccaggattttcagagtttattattggccctttaatggatgctctttcggaaagttctctc
tatagcaggttatcaggtcagattatcggaacctgtcctcctttaggaatgaaattgcaa
atgttcttggctacctttttcacaagcctccctgaaaaagaaaaaagtagttttttgtta
aagtttatacagaagatgagcaataggcactggtgtgctgttccaattttgtttctgtcc
atggcactggcaaatattccagcatatagagtactagataccgaaggactcctagctctg
agagatgtcctgcagtgcaccatgatcacccatcagattctcctacggggagctgctcag
tgctatcttcttaaagcagctatactcttgacagatgtagagaaagtgtccctttcagat
attgcaaacttcattgtgtctctgaaaccagaggagtcattaggcagagggactgttttg
tggacaatgctttgtaattggttgcgtgtaaatgacaagcactttcgaaagcctttaaac
tgcaatgtgcctcaagacaaaactgcattaagtgtttatgcacaatcccttgtggaggat
tatctgaaaacacctatagccaattctgcagaagactgccttatgcctgactggtttgaa
gcgaaacttgttgctacgatgattctgctgactgcagatgtggaagagatgaaacatgta
tacagtgtcaatggcagcacagaacggattgagctgaaggctctcctaaaccctctacta
gatgtcttgctgaaacttggcactaatccctacatctcatcactgaaaaccgataaaagc
ctacagctgctattgaagctactgcagacttgttcaatcaaatgttccagtccacaagtt
gatgggataatagcagttctccagaattcatttatgactgccacagaaagtattttggat
tttctcctcagaagacttacagcaaatgaattaaataccatttcagatctgcagcgctgt
aatttatatctagaagtgttgtcagagctgatgaacatttgctcagtcaatggctggaaa
aaaggaccatcaatctgcagcttcatctcctctctgataaatacctctctctgcagtgtt
caagagggaaatagtgaaaaggaggtaaaacttggggaacagattcagaaggtagtgagt
atggcatcgctaagtgtgatttgtgaaattattgatcagaagccagatcttcagcttgaa
tctctcccagctgttgaaaccctaaaaacaactatttcctgtgctcaacttaaccatgta
ttaaagaagccttgcagtatggaaaaagatagttatcttgaagagccagcatctcatcaa
ggatgggggaaaattgtagcgtgttatatacatgatcagtgggtttgtcttcattttgtt
ctaaataattatcaaaagctttctaaggacaaatatatagagcactttttgccagatgtt
caaaaatgcacaagaattttacagtctgcgctggaagcagtgacaattcttccttctgat
catatcttaccagtgtttcattccatgaaaatagtcgtttccaagcttttggaatcctct
gaatctctgtgcatagaggcttttgacttagcatggaaaattatatttgctcttagtaac
acacagctgatcttttggcccaatctaaaagcttttgttcagtttgtgtttgatcctgaa
attcttgctgccgcagcaaagaacaaaagtcaggcatacaccaggataaaagagatcata
tttcagatgattgaaatgtcttcaacaaggactggcgtctttaatatgttgttgacttac
tgctgtcagtcttggctatttcctacgtctgatgacccgaacgctgttgaaaaggctttt
tcaaatgctagcaattacagtgaacttgtagtagaggcctgtttatttggaactgttttc
aggcgtgatcaaagactcgttcaggaagtatgtgcttttatagaaaatcttggagatgaa
tgtgcagcaaatgttgttacagaaagtacgaacagggatgaccattatgtgagagtttgc
gccatcaaatttctgtgcttgctggatgagacaaatacattgcacaagaagtttatagaa
gactttgtgatgaaactacttgataggggtgaactcatctccaaatcaaaaaaccgctat
tatgtgaactccttacaacacagaattaaaaatcgactgtggcagacattgctagttctg
tttccaaaacttcatgaggatattttaacaagaactattgacaggattctacaagctgga
catagtaataatcaagcatcagtaaagtacttaatagaatggaatatcatattgattcta
cataagtttcctcattttcttcaaaagttctgggattgttttaactatggtgaagaccag
cttaaaacgagcatttgcacatttttagcagtgatgtcacattttgacgtaattctccaa
aatatatctgagaagacaccagccttaaagaaagccctcgtcgttgttctacagtggtgc
ttccatcacaatttcagtgttcgactgtatgctttaattgcccttaagaaaatttgggga
atgtgcaaagcattgtgtgtggaagattttgaagctttagctccagttattgaatgtagt
ctcaatcaagcagaaagcatgcatggaacagggaatgctaaaaagaattggcagcgcatc
caaaaacactttttctttgaaaactttcatccacttaaggattactgtgttgagacaata
ttttacaccttgccgcatctttcagaaattgcagaagaggaattgatttctctatctaaa
tttaaagcattcacagacatcccactgagctcaacatttccattctctcattctcgaact
tcacttcttgatctgaagcagtgtgactggtctcagcaagatttgggtttgagttcagct
gaatcaagcagtcaaaggcaatggacagatgttcaaaaaaagataattccttggaaggac
agtactcctgatctggagcttgtgtttcaagatcgggctactaaacttggaaaagcaaac
aataaactgattgtagtggcttcactcattgataaacctaccaatttaggaggcttgtgt
cgtacatgtgaaatatttggggtgtcagctctcattgttggcagccttcattatataaat
gacaagcaatttcagtacctcagtgtttctgctgaacaatggctttcccttattgaggta
aagccattccagcttgctgattatttggagcagaagaaaatggaaggctacactataata
ggtgtagagcaaaccgctaaaagttgtgatctgacagaatattgttttccagagaaatcc
ctcttgctgctgggaaatgagcatgagggaatccccgcaaatctgattcagcagttggac
acctgtgtagaaattcctcagcaaggagttatccggtcacttaatgtccatgtaagtgga
gctctgctcatttgggaatatataaggcaacagatcgtcaagggaaaagaatga
DBGET
integrated database retrieval system
