Podarcis muralis (common wall lizard): 114594883
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Entry
114594883 CDS
T06059
Symbol
CCDC88A
Name
(RefSeq) LOW QUALITY PROTEIN: girdin
KO
K25392
girdin
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmua03037
]
114594883 (CCDC88A)
Cilium and associated proteins [BR:
pmua03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114594883 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
Motif
Other DBs
NCBI-GeneID:
114594883
NCBI-ProteinID:
XP_028580947
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All DBs
Position
3:complement(112697639..112768885)
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AA seq
2042 aa
AA seq
DB search
MENEIFTPLLEVFISSPLVTWVKTFGPLAGGNPTNLDEYVALVDGVFLNEVMLQINPKAS
SQRVNKKINNDASLRIQNLSILVKQIKSYYQETLQQLIMMPLPNILIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDIRAAVAAHIQEVTHNQENVFDLQWMDDSA
LSHDCIESLLKNMALHLKRLIDERDEHSETIIELSEERDSLHFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQIEAELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMETERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQINRSSELSEAPRKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQN
AVGSAEGSSSKMLKMEKENQRLSKKLEGLEKELSEEKQGLQNSQNLSKDLMKEKAQLEKT
IETLRENSERQIKILEQENEHLNRTVASLRQRSQISAEARVKDIEKENKILHESIKETSS
KLNKIEFEKKQLKKELEHYKEKGERADELEKEVQHLEKENELLQKKITNLKITCEKIDSL
EQENSSLDTENRKLKKALDSLKNLSFQLESLEKENTQLDEENLELRRTVETLKSTNIKMA
QLELENKELESEKGQLQKSLDLMKTSFKKTERLEVSYQGLDTENQRLQKALENTNKKIQH
LESELQDLETENQTLQKNLEELKISSKRLEKLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQADIKDSTLEENNVKIGDLEKENKSLVKEIGICKEASIRLKEIEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSSDDSKYKLLESRL
ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEEKMVQNCS
SKTDEESLSVNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNN
NVQAQIVALQRQTVSLQEQNTTLQTQNAKLQVENSAINSQSTSLMNQNAQLLIQQSTLEN
ENESIIKEREDLRSLYDSLIKDHEKLEQLHERQATEYESLISKHGNLKSAHKNLEVEHKD
LEDRYNQLLKQKVQLEELEKVLKAEQEKMLQQNKKHETVAAEYKKLCEENDRLNHTYTQL
LKENEILQMDHKNLKTLLNSSKLEQTRLEAEFSKLKEQYQQLDITYTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDINRERLKSLTLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTVGAKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ
SMVLAGGQWTGSSEHLEGPDDISTGKRRKELGSMAFSTTSINFATVNSAAGLRSKQLLNN
KDATSFEDVSPQGISDDSSTGSRIHASRPASLDSGRTSTSNSNNNASLHEVKAGTVTNQS
RPQSHSSGEFSLLHEHDAWSSSSSSPIQYLKSHARSSPMLHPKMSETMDRQGTHRIKTDS
PGSEVVTLQQFLEESNKGTSAELKSSSQDNLLDEVMKFFSENAELVGRDKLRKQSSGSGG
IARSQSVKNTMEFSDGKSAKQGHLTRPSLRRMEDANFANSSKTLTAGTKGRARSVKESVQ
SQRQSKDCNPYVTLPRASSVISTAEGTTRRTSIHDFLSKDTRQPVSIDPTPPTGDRSVPS
ASSEYNPQQHSSVFHYPPFPSVTSSENDLGRIATLDSSTCKSEKARSSRTGKTNFITETF
SCSNVYDEKMGTSTSIIGKLSAVRLSRPFLALNTELVSNVSGLPQMPVSKTTDKTFDSSV
KSPQNDHKLPSENQKSSDGRNVEMNQNSGESTPLTHSNASDSKIPSPVSEDTQTVWYEYG
CV
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgagattttcacacctcttttggaggtcttcatatccagccctcttgttacg
tgggttaagacatttggaccgttagctggaggaaatccaacaaacttggacgaatatgtt
gcacttgtggatggcgttttcttgaatgaagtcatgcttcaaatcaaccctaaggcatct
agtcaaagagtaaataagaaaatcaacaatgatgcatcacttcgaattcaaaatttatct
attttggtgaagcaaataaaatcatactatcaggagacattgcaacaattgattatgatg
cctttgccaaacatcttgataattggcaaaaatcccttttcagagcaaggcactgaagaa
gtaaaaaagctgctcctactcctccttggatgtgcagttcagtgtcagaagaaagaagaa
ttcattgaaagaatccaaagtttagactttgatataagagctgctgttgctgcccatata
caagaggtaactcataatcaggaaaatgtgtttgatctccagtggatggatgacagtgct
ctgtcacatgactgtattgagtctctcctaaaaaatatggcattgcatttaaaaaggctt
atagatgaacgagatgagcattctgagactatcatagaactctctgaagaacgagactct
cttcattttctacctcatgcatcagcagcacaatcaccttgtggatctccaggcatgaag
cgcactgaaagtaggcagcacttatcagtggaactagcagatgccaaagcaaagatcaga
aggcttagacaagagcttgaggagaagactgaacagttactggattgtaagcaagaactg
gaacaaattgaagctgaattgaaaagactgcaacaagagaatatgaatttgctttcagat
gcccgttctgccagggtgtaccgtgatgaacttgatgctctcagagagaaggcaatcagg
gttgacaagcttgaaagtgaagtcagtcggtataaggagaggctacacgatattgaattc
tacaaggctagagtagaggagctaaaagaagataatcaagtactgctagaaacaaagaca
atgttggaagatcagttggagggaacccgagcccgttctgataaactgcacgaactggaa
aaggaaaacttacagttaaaggcaaaacttcatgatatggaaacggaacgtgatatggac
cggaagaaaattgaggaacttatggaggaaaatatgacacttgaaatggctcagaagcaa
agtatggatgaatcactgcatttgggctgggaacttgaacaaataaacagatcatccgaa
ctttctgaagcgccacgaaagtcacttggtcatgaagtgaatgaactgacatcaagtagg
ttactgaaactagaaatggaaaaccaaagtttgctaaagactgtggaagagttgcaaaat
gcagtgggatctgcagaaggcagcagttcaaaaatgctgaaaatggaaaaggaaaaccaa
agactaagtaaaaagctggaaggacttgagaaggaactttctgaagagaaacaaggtctt
cagaatagtcagaatcttagcaaagatctaatgaaagagaaagcccaacttgaaaagact
attgagactctaagagaaaactcagagagacagattaaaatcctggaacaagagaatgag
catttgaatcgaacagtggcttccctcagacagcgttcacaaatcagtgctgaagcaaga
gtgaaagatattgaaaaggaaaataaaattctccatgaatctattaaagagacaagcagt
aaattaaataagatagaatttgaaaagaagcaactgaagaaagagttagagcattataaa
gagaagggagaaagagcagatgaactggagaaagaagttcaacatcttgaaaaagaaaac
gaactattacagaaaaagattaccaacttaaagattacatgtgaaaaaatagattcctta
gaacaagagaactcaagtctagacactgaaaacagaaagctgaaaaaggctctagatagt
cttaaaaatctcagctttcaattagagtcattagagaaagagaacacacaacttgatgaa
gagaatttagagctcagaagaacagttgaaactttgaaaagtacaaatatcaagatggct
cagttagagctagaaaataaagaactggaaagtgagaaaggacagcttcaaaagagcctg
gatcttatgaaaacttcttttaagaagaccgaacgcttagaagtaagttatcagggtttg
gatacagaaaaccaaagactgcagaaagccctagaaaacaccaacaaaaagattcagcat
ctagaaagtgaactacaggatctagagacggaaaatcaaaccttacaaaaaaacctggaa
gaactcaaaatctctagtaaacgcttagaaaaattagaaaaagagaacaagcttttggaa
caagagacctctcagctagaaaaagacaagaaacagctggaaaaagagaacaagaggctt
cgacaacaagcagatattaaggacagcacattagaagagaataatgtaaaaattggtgat
ctggaaaaagagaacaagtcactcgttaaggaaattggtatatgtaaagaagcttctatt
cgtttaaaagagattgaaaaggaaaataaagagcttgtaaaaagagccaccattgacaag
aaaacacttgtcacattacgggaggatttggtgaatgaaaaactgaagacacagcagatg
aataatgatttagaaaagcttacacatgaacttgaaaagataggtttaaataaggagcgc
ctcttgcatgatgagcagagttcagatgatagcaaatacaagctactggagtcaagatta
gaatccacattgaaaaagtcacttgaaataaaagaagaaaaaattgctgctttggaagct
cgattagaagaatcaacaaatttaaatcaacaactgcgccaggaacttaaaacagtgaaa
aagaattatgaggccctcaagcaaagacaagaggaagagaaaatggtacagaattgttcg
tcaaaaactgatgaagaaagtttgtctgtcaataaatgggaacgagagagccaagaaact
actagagaacttttaaaggttaaagatagattgattgaagttgagagaaataacgcaact
ctgcaggcagagaagcaagccctgaaaacacaactaaagcagcttgagacgcagaacaat
aatgtgcaagctcagattgtggcacttcagagacagactgtttccttacaggagcaaaat
acaacgctgcaaactcagaatgccaagcttcaggtagaaaattctgctattaattcgcaa
agtacatctcttatgaatcagaatgcacaattgctgattcagcagtctaccttggaaaat
gaaaatgagtccataatcaaggaacgtgaggatctgagatcgctatatgattcactcatc
aaagatcatgaaaaactggaacagcttcatgaacggcaagctactgaatatgaatctcta
atttccaaacatggaaaccttaagtcagcacacaagaatcttgaggtggaacataaggac
ttagaagacagatacaatcaattgctgaaacaaaaagtgcaattagaagaactggaaaaa
gttctcaaagcagaacaagagaagatgctacagcaaaacaaaaagcatgaaacagtagca
gcggaatacaaaaagctttgtgaggaaaatgacagattgaatcatacatatacccagctt
ttgaaagaaaatgaaattctccaaatggatcataagaatttgaaaacattactgaacagt
tctaaactggaacaaacaaggctggaagctgaattttccaaactcaaagagcagtaccaa
cagctggatattacgtatacaaaactgaataatcagtgtgagttgcttagccagctaaaa
ggaaatttggaagaagaaaacagacacctgttggatcaaatacagacattaatgctgcaa
aacagaacgttattagagcagaatatggaaagcaaagatctgttccacgttgaacaaagg
cagtatattgacaagctaaatgaattgagaagacaaaaagagaaattggaagaaaagatt
atggatcagtataaattttatgaaccatctcctccgagaaggagaggtaattggattact
ctgaaaatgaggaaactgataaaatcaaagaaggatattaaccgagaacgcctcaagtct
ctaactctgacaccaacccgctcagaatctagtgaaggatttcttcagctgccacatcag
gacagtcaagatagttcctcggtgggctcaaattccctggaagatggtcagaccgtgggg
gctaagaaaagcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag
tccatggtcctagcaggaggacaatggacaggtagttctgagcatctggagggtcctgat
gatatatctacgggtaaaaggagaaaagaattgggatctatggccttctctactacatcc
atcaactttgcaactgtcaactctgctgcaggcttgagatccaagcagttgcttaataat
aaagatgctacatcttttgaagatgtaagtccacaaggaattagtgatgattctagtaca
ggatcaagaattcatgcttccagaccagccagccttgatagtggcagaacatccactagc
aatagcaataataatgcctcactccatgaagtcaaagcaggcacagttactaaccaaagc
aggccacaaagccacagcagtggagaatttagcctgcttcatgagcatgacgcatggtcc
agcagcagcagcagtcccatccagtatttgaaaagccatgccaggtctagccccatgctc
catcctaaaatgtcagaaacaatggatagacaaggaacgcacagaattaaaacggactcc
cctgggagtgaagtggttactctgcagcagttcttggaagaaagtaataaagggacttcg
gctgagctcaagtcctcaagccaagataatcttttggatgaagtgatgaaatttttttct
gaaaatgctgaattagtcggaagagataaattaagaaagcagtcatcaggcagcggtggt
attgccagatcacagagtgtgaaaaacacaatggagttctctgatggaaagtcagctaaa
caaggacaccttacaaggcccagcttgcgtagaatggaagatgccaactttgcaaactct
tcaaaaacacttacagcaggcactaaaggaagggccaggtctgttaaagaaagtgtacaa
tcacaacgacaatcaaaagattgtaatccttatgtgactttacctcgtgcaagcagtgtg
atttcgactgcagaaggaactactcggaggacaagcatccatgattttttgtctaaggac
actaggcagccagtatcaattgatccaactccacctacaggtgacagaagcgtcccatca
gcttctagtgagtacaacccccagcaacactcctctgtttttcattatcccccttttcct
tcagttacctcgtcagaaaatgacttgggtaggatagccacgctagatagttctacatgt
aaatcagaaaaggctaggagttcaagaacaggcaagacaaattttattactgaaacattt
tcttgtagtaatgtgtacgatgagaaaatgggcacatcaacaagcattataggtaagttg
tctgcagtccgtttgtccaggccatttttggcactcaacaccgaattagtcagcaatgtt
agtggactgccccaaatgcctgtatcaaagacaactgataagacatttgattcatctgtg
aaatctccacagaatgatcacaaactaccttctgagaatcagaaatcatctgatggcaga
aatgtagagatgaatcagaatagcggtgaatctacaccacttacccattcaaatgctagt
gatagtaaaataccatcacccgtttctgaagatactcagactgtttggtatgaatatggt
tgtgtatga
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